RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 TLR7Q9NYK1 1049 aaKnown RBP25.47■■□□□ 1.67
CTDSPL-206ENST00000443503 CDK12Q9NYV4 1490 aaPredicted RBP25.46■■□□□ 1.67
CTDSPL-206ENST00000443503 POTEJP0CG39 1038 aa25.46■■□□□ 1.67
CTDSPL-206ENST00000443503 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.46■■□□□ 1.67
CTDSPL-206ENST00000443503 SPECC1Q5M775 1068 aa25.46■■□□□ 1.67
CTDSPL-206ENST00000443503 CBX8Q9HC52 389 aa25.46■■□□□ 1.67
CTDSPL-206ENST00000443503 TRPM1Q7Z4N2 1603 aa25.46■■□□□ 1.67
CTDSPL-206ENST00000443503 CYLC1P35663 651 aaPredicted RBP25.46■■□□□ 1.67
CTDSPL-206ENST00000443503 ADCK5Q3MIX3 580 aa25.46■■□□□ 1.67
CTDSPL-206ENST00000443503 HAUS7Q99871 368 aa25.46■■□□□ 1.67
CTDSPL-206ENST00000443503 AATFQ9NY61 560 aaKnown RBP eCLIP25.46■■□□□ 1.678e-6■■■■□ 21.3
CTDSPL-206ENST00000443503 CLTCL1P53675 1640 aa25.46■■□□□ 1.67
CTDSPL-206ENST00000443503 MTMR6Q9Y217 621 aa25.46■■□□□ 1.67
CTDSPL-206ENST00000443503 ERBB4Q15303 1308 aa25.46■■□□□ 1.67
CTDSPL-206ENST00000443503 UFL1O94874 794 aa25.45■■□□□ 1.67
CTDSPL-206ENST00000443503 MCM3P25205 808 aa25.45■■□□□ 1.67
CTDSPL-206ENST00000443503 CTSWP56202 376 aa25.45■■□□□ 1.67
CTDSPL-206ENST00000443503 STXBP4Q6ZWJ1 553 aa25.45■■□□□ 1.67
CTDSPL-206ENST00000443503 MROH5Q6ZUA9 1318 aa25.45■■□□□ 1.67
CTDSPL-206ENST00000443503 LSG1Q9H089 658 aaKnown RBP25.45■■□□□ 1.66
CTDSPL-206ENST00000443503 MMRN2Q9H8L6 949 aa25.45■■□□□ 1.66
CTDSPL-206ENST00000443503 HSPD1P10809 573 aaKnown RBP25.45■■□□□ 1.66
CTDSPL-206ENST00000443503 CCDC175P0C221 793 aa25.44■■□□□ 1.66
CTDSPL-206ENST00000443503 WWC3Q9ULE0 1092 aa25.44■■□□□ 1.66
CTDSPL-206ENST00000443503 MAP3K4Q9Y6R4 1608 aa25.44■■□□□ 1.66
CTDSPL-206ENST00000443503 CHMP4BP1P59074 171 aa25.44■■□□□ 1.66
CTDSPL-206ENST00000443503 HLTFQ14527 1009 aaKnown RBP eCLIP25.43■■□□□ 1.661e-6■■■□□ 17.7
CTDSPL-206ENST00000443503 LETM2Q2VYF4 491 aa25.43■■□□□ 1.66
CTDSPL-206ENST00000443503 ZNF202O95125 648 aa25.43■■□□□ 1.66
CTDSPL-206ENST00000443503 CETN2P41208 172 aa25.43■■□□□ 1.66
CTDSPL-206ENST00000443503 TTC6Q86TZ1 520 aa25.43■■□□□ 1.66
CTDSPL-206ENST00000443503 PPP4R3AQ6IN85 833 aa25.43■■□□□ 1.66
CTDSPL-206ENST00000443503 SMARCC2Q8TAQ2 1214 aa25.43■■□□□ 1.66
CTDSPL-206ENST00000443503 ERBB3P21860 1342 aa25.43■■□□□ 1.66
CTDSPL-206ENST00000443503 POLR2DO15514 142 aaKnown RBP25.43■■□□□ 1.66
CTDSPL-206ENST00000443503 SLU7O95391 586 aaKnown RBP25.43■■□□□ 1.66
CTDSPL-206ENST00000443503 PUS3Q9BZE2 481 aaKnown RBP25.43■■□□□ 1.66
CTDSPL-206ENST00000443503 BMS1Q14692 1282 aaKnown RBP25.42■■□□□ 1.66
CTDSPL-206ENST00000443503 SEPT7Q16181 437 aaKnown RBP25.42■■□□□ 1.66
CTDSPL-206ENST00000443503 ZBTB38Q8NAP3 1195 aaPredicted RBP25.42■■□□□ 1.66
CTDSPL-206ENST00000443503 DRC1Q96MC2 740 aa25.42■■□□□ 1.66
CTDSPL-206ENST00000443503 FBXO3Q9UK99 471 aa25.42■■□□□ 1.66
CTDSPL-206ENST00000443503 KCNJ14Q9UNX9 436 aa25.42■■□□□ 1.66
CTDSPL-206ENST00000443503 hCG_1642624A0A1W2PR95 340 aa25.42■■□□□ 1.66
CTDSPL-206ENST00000443503 EHBP1Q8NDI1 1231 aa25.42■■□□□ 1.66
CTDSPL-206ENST00000443503 MAP4K1Q92918 833 aa25.42■■□□□ 1.66
CTDSPL-206ENST00000443503 POTEB2H3BUK9 544 aa25.42■■□□□ 1.66
CTDSPL-206ENST00000443503 KARSQ15046 597 aaKnown RBP25.42■■□□□ 1.66
CTDSPL-206ENST00000443503 PIK3AP1Q6ZUJ8 805 aa25.42■■□□□ 1.66
CTDSPL-206ENST00000443503 MACROD2A1Z1Q3 448 aa25.41■■□□□ 1.66
CTDSPL-206ENST00000443503 PCCAP05165 728 aaPredicted RBP25.41■■□□□ 1.66
CTDSPL-206ENST00000443503 PARP1P09874 1014 aaKnown RBP25.41■■□□□ 1.66
CTDSPL-206ENST00000443503 PRPF4BQ13523 1007 aaKnown RBP25.41■■□□□ 1.66
CTDSPL-206ENST00000443503 ARHGAP31Q2M1Z3 1444 aa25.41■■□□□ 1.66
CTDSPL-206ENST00000443503 ASAP1Q9ULH1 1129 aa25.41■■□□□ 1.66
CTDSPL-206ENST00000443503 AKNAD1Q5T1N1 836 aa25.41■■□□□ 1.66
CTDSPL-206ENST00000443503 TRAF1Q13077 416 aa25.41■■□□□ 1.66
CTDSPL-206ENST00000443503 SYT10Q6XYQ8 523 aa25.41■■□□□ 1.66
CTDSPL-206ENST00000443503 C17orf53Q8N3J3 647 aaPredicted RBP25.41■■□□□ 1.66
CTDSPL-206ENST00000443503 LZTFL1Q9NQ48 299 aa25.41■■□□□ 1.66
CTDSPL-206ENST00000443503 SCLT1Q96NL6 688 aa25.4■■□□□ 1.66
CTDSPL-206ENST00000443503 SPDYE3A6NKU9 549 aa25.4■■□□□ 1.66
CTDSPL-206ENST00000443503 UBXN1Q04323 297 aa25.4■■□□□ 1.66
CTDSPL-206ENST00000443503 FGAP02671 866 aa25.4■■□□□ 1.66
CTDSPL-206ENST00000443503 PDE6AP16499 860 aa25.4■■□□□ 1.66
CTDSPL-206ENST00000443503 GAS2L3Q86XJ1 694 aa25.4■■□□□ 1.66
CTDSPL-206ENST00000443503 CUTAO60888 179 aa25.39■■□□□ 1.66
CTDSPL-206ENST00000443503 VEZTQ9HBM0 779 aa25.39■■□□□ 1.66
CTDSPL-206ENST00000443503 RGS12O14924 1447 aa25.39■■□□□ 1.66
CTDSPL-206ENST00000443503 TTLL12Q14166 644 aaPredicted RBP25.39■■□□□ 1.66
CTDSPL-206ENST00000443503 MYSM1Q5VVJ2 828 aa25.39■■□□□ 1.66
CTDSPL-206ENST00000443503 USP28Q96RU2 1077 aa25.39■■□□□ 1.66
CTDSPL-206ENST00000443503 NAA15Q9BXJ9 866 aaKnown RBP25.39■■□□□ 1.66
CTDSPL-206ENST00000443503 HDAC9Q9UKV0 1011 aa25.39■■□□□ 1.66
CTDSPL-206ENST00000443503 ADD1P35611 737 aaKnown RBP25.39■■□□□ 1.65
CTDSPL-206ENST00000443503 ZNF274Q96GC6 653 aaPredicted RBP25.38■■□□□ 1.65
CTDSPL-206ENST00000443503 EIF6P56537 245 aaKnown RBP25.38■■□□□ 1.65
CTDSPL-206ENST00000443503 RPS8P62241 208 aaKnown RBP25.38■■□□□ 1.65
CTDSPL-206ENST00000443503 CTAGE15A4D2H0 777 aa25.38■■□□□ 1.65
CTDSPL-206ENST00000443503 CTAGE8P0CG41 777 aa25.38■■□□□ 1.65
CTDSPL-206ENST00000443503 CTAGE6Q86UF2 777 aa25.38■■□□□ 1.65
CTDSPL-206ENST00000443503 CTAGE4Q8IX94 777 aa25.38■■□□□ 1.65
CTDSPL-206ENST00000443503 WDR66Q8TBY9 1149 aa25.38■■□□□ 1.65
CTDSPL-206ENST00000443503 PARP3Q9Y6F1 533 aa25.38■■□□□ 1.65
CTDSPL-206ENST00000443503 IBSPP21815 317 aaPredicted RBP25.38■■□□□ 1.65
CTDSPL-206ENST00000443503 ZNF75DP51815 510 aa25.37■■□□□ 1.65
CTDSPL-206ENST00000443503 GPT2Q8TD30 523 aa25.37■■□□□ 1.65
CTDSPL-206ENST00000443503 GREM2Q9H772 168 aa25.37■■□□□ 1.65
CTDSPL-206ENST00000443503 TSPOAP1O95153 1857 aa25.37■■□□□ 1.65
CTDSPL-206ENST00000443503 CCT6AP40227 531 aaKnown RBP25.37■■□□□ 1.65
CTDSPL-206ENST00000443503 ARID5AQ03989 594 aa25.37■■□□□ 1.65
CTDSPL-206ENST00000443503 PAF1Q8N7H5 531 aa25.37■■□□□ 1.65
CTDSPL-206ENST00000443503 CCDC113Q9H0I3 377 aa25.37■■□□□ 1.65
CTDSPL-206ENST00000443503 ANTXR1Q9H6X2 564 aa25.37■■□□□ 1.65
CTDSPL-206ENST00000443503 MAPK8IP1Q9UQF2 711 aa25.37■■□□□ 1.65
CTDSPL-206ENST00000443503 GPCPD1Q9NPB8 672 aa25.37■■□□□ 1.65
CTDSPL-206ENST00000443503 CCDC42Q96M95 316 aa25.36■■□□□ 1.65
CTDSPL-206ENST00000443503 ARFGAP3Q9NP61 516 aa25.36■■□□□ 1.65
CTDSPL-206ENST00000443503 ADORA1P30542 326 aa25.36■■□□□ 1.65
CTDSPL-206ENST00000443503 EYA3Q99504 573 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms