RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 MAP3K9P80192 1104 aa19.3■□□□□ 0.68
PMS1-213ENST00000441310 ENGASEQ8NFI3 743 aa19.3■□□□□ 0.68
PMS1-213ENST00000441310 PIGBQ92521 554 aa19.3■□□□□ 0.68
PMS1-213ENST00000441310 A0A0D9SFI3 127 aa19.29■□□□□ 0.68
PMS1-213ENST00000441310 FANCCQ00597 558 aa19.29■□□□□ 0.68
PMS1-213ENST00000441310 DHX58Q96C10 678 aa19.29■□□□□ 0.68
PMS1-213ENST00000441310 ZSCAN16Q9H4T2 348 aaPredicted RBP19.29■□□□□ 0.68
PMS1-213ENST00000441310 MRFAP1Q9Y605 127 aa19.29■□□□□ 0.68
PMS1-213ENST00000441310 MAP2K7O14733 419 aa19.29■□□□□ 0.68
PMS1-213ENST00000441310 ADAMTS2O95450 1211 aa19.29■□□□□ 0.68
PMS1-213ENST00000441310 MPHOSPH8Q99549 860 aa19.29■□□□□ 0.68
PMS1-213ENST00000441310 CWC25Q9NXE8 425 aaPredicted RBP19.29■□□□□ 0.68
PMS1-213ENST00000441310 RCOR1Q9UKL0 485 aa19.29■□□□□ 0.68
PMS1-213ENST00000441310 CCDC151A5D8V7 595 aa19.29■□□□□ 0.68
PMS1-213ENST00000441310 ADD1P35611 737 aaKnown RBP19.29■□□□□ 0.68
PMS1-213ENST00000441310 TXLNAP40222 546 aa19.29■□□□□ 0.68
PMS1-213ENST00000441310 CCDC91Q7Z6B0 441 aa19.29■□□□□ 0.68
PMS1-213ENST00000441310 MICALL1Q8N3F8 863 aa19.29■□□□□ 0.68
PMS1-213ENST00000441310 CCDC102AQ96A19 550 aa19.29■□□□□ 0.68
PMS1-213ENST00000441310 AKAP2Q9Y2D5 859 aa19.29■□□□□ 0.68
PMS1-213ENST00000441310 PPP2R2CQ9Y2T4 447 aa19.29■□□□□ 0.68
PMS1-213ENST00000441310 ZSCAN12O43309 604 aa19.28■□□□□ 0.68
PMS1-213ENST00000441310 TIMM10P62072 90 aa19.28■□□□□ 0.68
PMS1-213ENST00000441310 LRRC31Q6UY01 552 aa19.28■□□□□ 0.68
PMS1-213ENST00000441310 CXorf56Q9H5V9 222 aa19.28■□□□□ 0.68
PMS1-213ENST00000441310 COPRSQ9NQ92 184 aa19.28■□□□□ 0.68
PMS1-213ENST00000441310 CCDC172P0C7W6 258 aa19.28■□□□□ 0.68
PMS1-213ENST00000441310 GUCY1B3Q02153 619 aa19.28■□□□□ 0.68
PMS1-213ENST00000441310 TNNI3KQ59H18 835 aa19.28■□□□□ 0.68
PMS1-213ENST00000441310 MCTP2Q6DN12 878 aa19.28■□□□□ 0.68
PMS1-213ENST00000441310 FPGT-TNNI3KV9GXZ4 949 aa19.28■□□□□ 0.68
PMS1-213ENST00000441310 SYNE4Q8N205 404 aa19.27■□□□□ 0.68
PMS1-213ENST00000441310 DPF2Q92785 391 aa19.27■□□□□ 0.68
PMS1-213ENST00000441310 MAP4K1Q92918 833 aa19.27■□□□□ 0.68
PMS1-213ENST00000441310 PUF60Q9UHX1 559 aaKnown RBP19.27■□□□□ 0.68
PMS1-213ENST00000441310 CEP83Q9Y592 693 aa19.27■□□□□ 0.68
PMS1-213ENST00000441310 CASP7P55210 303 aa19.27■□□□□ 0.68
PMS1-213ENST00000441310 TTLL5Q6EMB2 1281 aa19.27■□□□□ 0.68
PMS1-213ENST00000441310 GPTP24298 496 aa19.27■□□□□ 0.67
PMS1-213ENST00000441310 NKX1-1Q15270 411 aaPredicted RBP19.27■□□□□ 0.67
PMS1-213ENST00000441310 MMS22LQ6ZRQ5 1243 aa19.27■□□□□ 0.67
PMS1-213ENST00000441310 FOXO4P98177 505 aa19.26■□□□□ 0.67
PMS1-213ENST00000441310 DDX46Q7L014 1031 aaKnown RBP19.26■□□□□ 0.67
PMS1-213ENST00000441310 SERPINC1P01008 464 aa19.26■□□□□ 0.67
PMS1-213ENST00000441310 BRD3Q15059 726 aa19.26■□□□□ 0.67
PMS1-213ENST00000441310 CFAP100Q494V2 611 aa19.26■□□□□ 0.67
PMS1-213ENST00000441310 LRRC24Q50LG9 513 aa19.26■□□□□ 0.67
PMS1-213ENST00000441310 AXDND1Q5T1B0 1012 aaPredicted RBP19.26■□□□□ 0.67
PMS1-213ENST00000441310 HDXQ7Z353 690 aa19.26■□□□□ 0.67
PMS1-213ENST00000441310 CNNM3Q8NE01 707 aa19.26■□□□□ 0.67
PMS1-213ENST00000441310 FAM89AQ96GI7 184 aa19.26■□□□□ 0.67
PMS1-213ENST00000441310 LRRC2Q9BYS8 371 aa19.26■□□□□ 0.67
PMS1-213ENST00000441310 MKRN1Q9UHC7 482 aaKnown RBP19.26■□□□□ 0.67
PMS1-213ENST00000441310 MRC1P22897 1456 aa19.26■□□□□ 0.67
PMS1-213ENST00000441310 KARSQ15046 597 aaKnown RBP19.25■□□□□ 0.67
PMS1-213ENST00000441310 PUS3Q9BZE2 481 aaKnown RBP19.25■□□□□ 0.67
PMS1-213ENST00000441310 KIAA1468Q9P260 1216 aa19.25■□□□□ 0.67
PMS1-213ENST00000441310 H7C1W4 665 aa19.25■□□□□ 0.67
PMS1-213ENST00000441310 UBASH3AP57075 661 aa19.25■□□□□ 0.67
PMS1-213ENST00000441310 JAKMIP3Q5VZ66 844 aa19.25■□□□□ 0.67
PMS1-213ENST00000441310 ZNF589Q86UQ0 364 aaPredicted RBP19.25■□□□□ 0.67
PMS1-213ENST00000441310 CCDC12Q8WUD4 166 aaPredicted RBP19.25■□□□□ 0.67
PMS1-213ENST00000441310 SEC62Q99442 399 aaKnown RBP19.25■□□□□ 0.67
PMS1-213ENST00000441310 EIF3JO75822 258 aaKnown RBP19.25■□□□□ 0.67
PMS1-213ENST00000441310 RABL6Q3YEC7 729 aaPredicted RBP19.25■□□□□ 0.67
PMS1-213ENST00000441310 BEND6Q5SZJ8 279 aaPredicted RBP19.25■□□□□ 0.67
PMS1-213ENST00000441310 RPS6KA5O75582 802 aa19.24■□□□□ 0.67
PMS1-213ENST00000441310 NDUFA8P51970 172 aa19.24■□□□□ 0.67
PMS1-213ENST00000441310 HSP90B2PQ58FF3 399 aa19.24■□□□□ 0.67
PMS1-213ENST00000441310 CCDC129Q6ZRS4 1044 aa19.24■□□□□ 0.67
PMS1-213ENST00000441310 MRPS27Q92552 414 aaKnown RBP19.24■□□□□ 0.67
PMS1-213ENST00000441310 PKD1L3Q7Z443 1732 aa19.24■□□□□ 0.67
PMS1-213ENST00000441310 DHX8Q14562 1220 aaKnown RBP19.24■□□□□ 0.67
PMS1-213ENST00000441310 NCAPHQ15003 741 aa19.24■□□□□ 0.67
PMS1-213ENST00000441310 SUGP1Q8IWZ8 645 aaKnown RBP19.24■□□□□ 0.67
PMS1-213ENST00000441310 PDILTQ8N807 584 aa19.24■□□□□ 0.67
PMS1-213ENST00000441310 TMEM232C9JQI7 657 aa19.23■□□□□ 0.67
PMS1-213ENST00000441310 CHMP4BP1P59074 171 aa19.23■□□□□ 0.67
PMS1-213ENST00000441310 TADA2BQ86TJ2 420 aa19.23■□□□□ 0.67
PMS1-213ENST00000441310 FMR1NBQ8N0W7 255 aaPredicted RBP19.23■□□□□ 0.67
PMS1-213ENST00000441310 ABCB6Q9NP58 842 aa19.23■□□□□ 0.67
PMS1-213ENST00000441310 TOP1P11387 765 aaKnown RBP19.23■□□□□ 0.67
PMS1-213ENST00000441310 BRD2P25440 801 aaKnown RBP19.23■□□□□ 0.67
PMS1-213ENST00000441310 PNKPQ96T60 521 aa19.23■□□□□ 0.67
PMS1-213ENST00000441310 PCDHA7Q9UN72 937 aa19.23■□□□□ 0.67
PMS1-213ENST00000441310 NUTM2BA6NNL0 878 aaPredicted RBP19.23■□□□□ 0.67
PMS1-213ENST00000441310 NUTM2EB1AL46 878 aaPredicted RBP19.23■□□□□ 0.67
PMS1-213ENST00000441310 NUTM2AQ8IVF1 878 aaPredicted RBP19.23■□□□□ 0.67
PMS1-213ENST00000441310 EFCAB13Q8IY85 973 aa19.23■□□□□ 0.67
PMS1-213ENST00000441310 IRX2Q9BZI1 471 aaPredicted RBP19.23■□□□□ 0.67
PMS1-213ENST00000441310 MNAT1P51948 309 aa19.22■□□□□ 0.67
PMS1-213ENST00000441310 DESI2Q9BSY9 194 aa19.22■□□□□ 0.67
PMS1-213ENST00000441310 MAP2K2P36507 400 aa19.22■□□□□ 0.67
PMS1-213ENST00000441310 Q6ZUG5 572 aa19.22■□□□□ 0.67
PMS1-213ENST00000441310 TOGARAM2Q6ZUX3 1019 aa19.22■□□□□ 0.67
PMS1-213ENST00000441310 ANKRD20A12PQ8NF67 263 aa19.22■□□□□ 0.67
PMS1-213ENST00000441310 ZNF396Q96N95 335 aaPredicted RBP19.22■□□□□ 0.67
PMS1-213ENST00000441310 SLC3A2P08195 630 aaKnown RBP19.21■□□□□ 0.67
PMS1-213ENST00000441310 HSP90AA4PQ58FG1 418 aa19.21■□□□□ 0.67
PMS1-213ENST00000441310 FAM204AQ9H8W3 233 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms