RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 LCORLQ8N3X6 602 aa7.45□□□□□ -1.22
PUM1-207ENST00000440538 TDRD3Q9H7E2 651 aaKnown RBP7.45□□□□□ -1.22
PUM1-207ENST00000440538 KLRG2A4D1S0 409 aaPredicted RBP7.44□□□□□ -1.22
PUM1-207ENST00000440538 USP17L3A6NCW0 530 aa7.44□□□□□ -1.22
PUM1-207ENST00000440538 USP17L4A6NCW7 530 aa7.44□□□□□ -1.22
PUM1-207ENST00000440538 PRELPP51888 382 aa7.44□□□□□ -1.22
PUM1-207ENST00000440538 GRM1Q13255 1194 aa7.44□□□□□ -1.22
PUM1-207ENST00000440538 USP17L1Q7RTZ2 530 aa7.44□□□□□ -1.22
PUM1-207ENST00000440538 STAP2Q9UGK3 403 aa7.44□□□□□ -1.22
PUM1-207ENST00000440538 FBXO3Q9UK99 471 aa7.44□□□□□ -1.22
PUM1-207ENST00000440538 ECM2O94769 699 aaPredicted RBP7.44□□□□□ -1.22
PUM1-207ENST00000440538 EGFRP00533 1210 aa7.44□□□□□ -1.22
PUM1-207ENST00000440538 ATP2B2Q01814 1243 aa7.44□□□□□ -1.22
PUM1-207ENST00000440538 C17orf53Q8N3J3 647 aaPredicted RBP7.44□□□□□ -1.22
PUM1-207ENST00000440538 ESYT1Q9BSJ8 1104 aa7.44□□□□□ -1.22
PUM1-207ENST00000440538 MAGEB6P1A0A0J9YX57 407 aa7.44□□□□□ -1.22
PUM1-207ENST00000440538 SYCE3A1L190 88 aa7.44□□□□□ -1.22
PUM1-207ENST00000440538 CIAPIN1Q6FI81 312 aa7.44□□□□□ -1.22
PUM1-207ENST00000440538 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.44□□□□□ -1.22
PUM1-207ENST00000440538 GPT2Q8TD30 523 aa7.44□□□□□ -1.22
PUM1-207ENST00000440538 C7orf43Q8WVR3 580 aa7.44□□□□□ -1.22
PUM1-207ENST00000440538 RUFY2Q8WXA3 655 aa7.44□□□□□ -1.22
PUM1-207ENST00000440538 COA1Q9GZY4 146 aa7.44□□□□□ -1.22
PUM1-207ENST00000440538 GPR108Q9NPR9 543 aa7.44□□□□□ -1.22
PUM1-207ENST00000440538 SLX4Q8IY92 1834 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 SPEF2Q9C093 1822 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 BTDP43251 543 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 KIAA2012Q0VF49 1180 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 MCM9Q9NXL9 1143 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 TAF6LQ9Y6J9 622 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 SALL3Q9BXA9 1300 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 CTDSPL2Q05D32 466 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 TTF1Q15361 905 aaPredicted RBP7.43□□□□□ -1.22
PUM1-207ENST00000440538 KLHL40Q2TBA0 621 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 MCMDC2Q4G0Z9 681 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 SUPT20HQ8NEM7 779 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 TDRD7Q8NHU6 1098 aaKnown RBP7.43□□□□□ -1.22
PUM1-207ENST00000440538 WDR66Q8TBY9 1149 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 ZKSCAN3Q9BRR0 538 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 LMBRD1Q9NUN5 540 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 PALD1Q9ULE6 856 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 C10orf71Q711Q0 1435 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 SCN7AQ01118 1682 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 AK9Q5TCS8 1911 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 MAST3O60307 1309 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 ASTN2O75129 1339 aaPredicted RBP7.43□□□□□ -1.22
PUM1-207ENST00000440538 GOLGA6L22H0YM25 854 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 CYP2D6P10635 497 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 GMPSP49915 693 aaPredicted RBP7.43□□□□□ -1.22
PUM1-207ENST00000440538 TEX11Q8IYF3 940 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 SH3RF3Q8TEJ3 882 aaPredicted RBP7.43□□□□□ -1.22
PUM1-207ENST00000440538 NAPBQ9H115 298 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 USP40Q9NVE5 1235 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 ZNRF3Q9ULT6 936 aa7.43□□□□□ -1.22
PUM1-207ENST00000440538 N4BP2Q86UW6 1770 aaPredicted RBP7.42□□□□□ -1.22
PUM1-207ENST00000440538 CACNA1SQ13698 1873 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 AOX1Q06278 1338 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 ZNF541Q9H0D2 1346 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 POLR3DP05423 398 aaPredicted RBP7.42□□□□□ -1.22
PUM1-207ENST00000440538 ARID4AP29374 1257 aaPredicted RBP7.42□□□□□ -1.22
PUM1-207ENST00000440538 FOSBP53539 338 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 MIGA2Q7L4E1 593 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 RGL2O15211 777 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 IGSF3O75054 1194 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 USP17L8P0C7I0 530 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 EPS15P42566 896 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 NBPF9Q3BBW0 867 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 TMC4Q7Z404 712 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 PODNQ7Z5L7 613 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 MICALL2Q8IY33 904 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 CIZ1Q9ULV3 898 aaPredicted RBP7.42□□□□□ -1.22
PUM1-207ENST00000440538 RBM8AQ9Y5S9 174 aaKnown RBP7.42□□□□□ -1.22
PUM1-207ENST00000440538 RTL9Q8NET4 1388 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 REC8O95072 547 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 LMNB1P20700 586 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 STK3Q13188 491 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 DLGAP5Q15398 846 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 CFAP100Q494V2 611 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 PIBF1Q8WXW3 757 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 TMEM63CQ9P1W3 806 aa7.42□□□□□ -1.22
PUM1-207ENST00000440538 ADD2P35612 726 aa7.41□□□□□ -1.22
PUM1-207ENST00000440538 SLC44A5Q8NCS7 719 aa7.41□□□□□ -1.22
PUM1-207ENST00000440538 NSUN4Q96CB9 384 aaKnown RBP7.41□□□□□ -1.22
PUM1-207ENST00000440538 DYNLL2Q96FJ2 89 aa7.41□□□□□ -1.22
PUM1-207ENST00000440538 JAKMIP1Q96N16 626 aaKnown RBP7.41□□□□□ -1.22
PUM1-207ENST00000440538 OSBPL3Q9H4L5 887 aa7.41□□□□□ -1.22
PUM1-207ENST00000440538 CNOT7Q9UIV1 285 aaKnown RBP7.41□□□□□ -1.22
PUM1-207ENST00000440538 NOL7Q9UMY1 257 aaKnown RBP7.41□□□□□ -1.22
PUM1-207ENST00000440538 ANKRD36CQ5JPF3 1778 aa7.41□□□□□ -1.22
PUM1-207ENST00000440538 USP17L12C9JPN9 530 aa7.41□□□□□ -1.22
PUM1-207ENST00000440538 USP17L21D6R901 530 aa7.41□□□□□ -1.22
PUM1-207ENST00000440538 MPHOSPH10O00566 681 aaKnown RBP7.41□□□□□ -1.22
PUM1-207ENST00000440538 RANBP6O60518 1105 aaKnown RBP7.41□□□□□ -1.22
PUM1-207ENST00000440538 CRKP46108 304 aa7.41□□□□□ -1.22
PUM1-207ENST00000440538 CBX1P83916 185 aa7.41□□□□□ -1.22
PUM1-207ENST00000440538 NFIAQ12857 509 aa7.41□□□□□ -1.22
PUM1-207ENST00000440538 COL9A3Q14050 684 aaPredicted RBP7.41□□□□□ -1.22
PUM1-207ENST00000440538 SOGA3Q5TF21 947 aa7.41□□□□□ -1.22
PUM1-207ENST00000440538 CC2D2BQ6DHV5 1058 aa7.41□□□□□ -1.22
PUM1-207ENST00000440538 ZSCAN25Q6NSZ9 544 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms