RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 PNOCQ13519 176 aa15.7■□□□□ 0.1
HERPUD1-204ENST00000439977 MAGEB6Q8N7X4 407 aa15.7■□□□□ 0.1
HERPUD1-204ENST00000439977 ARMT1Q9H993 441 aa15.7■□□□□ 0.1
HERPUD1-204ENST00000439977 TJP1Q07157 1748 aa15.7■□□□□ 0.1
HERPUD1-204ENST00000439977 SH2B2O14492 632 aaPredicted RBP15.7■□□□□ 0.1
HERPUD1-204ENST00000439977 SYKP43405 635 aa15.7■□□□□ 0.1
HERPUD1-204ENST00000439977 GOLGA8FQ08AF8 430 aa15.7■□□□□ 0.1
HERPUD1-204ENST00000439977 GOLGA8DPQ0D2H9 430 aa15.7■□□□□ 0.1
HERPUD1-204ENST00000439977 TMEM67Q5HYA8 995 aa15.7■□□□□ 0.1
HERPUD1-204ENST00000439977 SHC4Q6S5L8 630 aa15.7■□□□□ 0.1
HERPUD1-204ENST00000439977 CHMP4CQ96CF2 233 aa15.7■□□□□ 0.1
HERPUD1-204ENST00000439977 SLC26A6Q9BXS9 759 aa15.7■□□□□ 0.1
HERPUD1-204ENST00000439977 BTG4Q9NY30 223 aa15.7■□□□□ 0.1
HERPUD1-204ENST00000439977 ZBTB43O43298 467 aa15.69■□□□□ 0.1
HERPUD1-204ENST00000439977 RANBP6O60518 1105 aaKnown RBP15.69■□□□□ 0.1
HERPUD1-204ENST00000439977 ZSWIM5Q9P217 1185 aa15.69■□□□□ 0.1
HERPUD1-204ENST00000439977 PKD1L3Q7Z443 1732 aa15.69■□□□□ 0.1
HERPUD1-204ENST00000439977 GOLGA8AA7E2F4 631 aa15.69■□□□□ 0.1
HERPUD1-204ENST00000439977 MBD4O95243 580 aa15.69■□□□□ 0.1
HERPUD1-204ENST00000439977 RBM6P78332 1123 aaKnown RBP15.69■□□□□ 0.1
HERPUD1-204ENST00000439977 SLC39A14Q15043 492 aa15.69■□□□□ 0.1
HERPUD1-204ENST00000439977 ARMCX5Q6P1M9 558 aa15.69■□□□□ 0.1
HERPUD1-204ENST00000439977 VGLL2Q8N8G2 317 aa15.69■□□□□ 0.1
HERPUD1-204ENST00000439977 ZNF215Q9UL58 517 aaPredicted RBP15.69■□□□□ 0.1
HERPUD1-204ENST00000439977 TACC3Q9Y6A5 838 aa15.69■□□□□ 0.1
HERPUD1-204ENST00000439977 ZMYM6O95789 1325 aa15.69■□□□□ 0.1
HERPUD1-204ENST00000439977 IFIT3O14879 490 aaKnown RBP15.68■□□□□ 0.1
HERPUD1-204ENST00000439977 FOXN1O15353 648 aa15.68■□□□□ 0.1
HERPUD1-204ENST00000439977 CMA1P23946 247 aa15.68■□□□□ 0.1
HERPUD1-204ENST00000439977 GUCY1A2P33402 732 aa15.68■□□□□ 0.1
HERPUD1-204ENST00000439977 IARSP41252 1262 aaKnown RBP15.68■□□□□ 0.1
HERPUD1-204ENST00000439977 CCAR2Q8N163 923 aaKnown RBP15.68■□□□□ 0.1
HERPUD1-204ENST00000439977 MIGA1Q8NAN2 632 aa15.68■□□□□ 0.1
HERPUD1-204ENST00000439977 PLA2G12BQ9BX93 195 aa15.68■□□□□ 0.1
HERPUD1-204ENST00000439977 SEC31BQ9NQW1 1179 aa15.68■□□□□ 0.1
HERPUD1-204ENST00000439977 FBXO3Q9UK99 471 aa15.68■□□□□ 0.1
HERPUD1-204ENST00000439977 PAXBP1Q9Y5B6 917 aa15.68■□□□□ 0.1
HERPUD1-204ENST00000439977 IGDCC4Q8TDY8 1250 aa15.68■□□□□ 0.1
HERPUD1-204ENST00000439977 STRBPQ96SI9 672 aaKnown RBP15.68■□□□□ 0.1
HERPUD1-204ENST00000439977 KCNJ14Q9UNX9 436 aa15.68■□□□□ 0.1
HERPUD1-204ENST00000439977 NLRP12P59046 1061 aa15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 NCAPHQ15003 741 aa15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 NAPBQ9H115 298 aa15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 EPB41L4AQ9HCS5 686 aaPredicted RBP15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 NWD2Q9ULI1 1742 aa15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 SMIM22K7EJ46 135 aa15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 DZIP3Q86Y13 1208 aaKnown RBP15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 DPF2Q92785 391 aa15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 FAM217BQ9NTX9 383 aaPredicted RBP15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 STRCP1A6NGW2 1772 aa15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 UBN2Q6ZU65 1347 aa15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 BTBD18B2RXH4 712 aa15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 CYP19A1P11511 503 aaPredicted RBP15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 RASGRF1Q13972 1273 aa15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 LONRF3Q496Y0 759 aa15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 E4F1Q66K89 784 aaPredicted RBP15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 NYAP1Q6ZVC0 841 aa15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 TICAM2Q86XR7 235 aa15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 LY9Q9HBG7 655 aa15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 ZHX1Q9UKY1 873 aaPredicted RBP15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 SLC12A7Q9Y666 1083 aa15.67■□□□□ 0.1
HERPUD1-204ENST00000439977 TNS2Q63HR2 1409 aa15.66■□□□□ 0.1
HERPUD1-204ENST00000439977 NEMFO60524 1076 aa15.66■□□□□ 0.1
HERPUD1-204ENST00000439977 GRIN1Q05586 938 aa15.66■□□□□ 0.1
HERPUD1-204ENST00000439977 TRIM29Q14134 588 aa15.66■□□□□ 0.1
HERPUD1-204ENST00000439977 TTF1Q15361 905 aaPredicted RBP15.66■□□□□ 0.1
HERPUD1-204ENST00000439977 IFNL3Q8IZI9 196 aa15.66■□□□□ 0.1
HERPUD1-204ENST00000439977 SPATA5Q8NB90 893 aa15.66■□□□□ 0.1
HERPUD1-204ENST00000439977 TEX13AQ9BXU3 409 aaPredicted RBP15.66■□□□□ 0.1
HERPUD1-204ENST00000439977 DCCP43146 1447 aa15.66■□□□□ 0.1
HERPUD1-204ENST00000439977 BCAMP50895 628 aa15.66■□□□□ 0.1
HERPUD1-204ENST00000439977 FANCCQ00597 558 aa15.66■□□□□ 0.1
HERPUD1-204ENST00000439977 UBE3CQ15386 1083 aa15.66■□□□□ 0.1
HERPUD1-204ENST00000439977 NTRK3Q16288 839 aa15.66■□□□□ 0.1
HERPUD1-204ENST00000439977 CPLX2Q6PUV4 134 aaKnown RBP15.66■□□□□ 0.1
HERPUD1-204ENST00000439977 FOXP4Q8IVH2 680 aaPredicted RBP15.66■□□□□ 0.1
HERPUD1-204ENST00000439977 TCRBV5S4A2TA0A5A2 114 aa15.65■□□□□ 0.1
HERPUD1-204ENST00000439977 SERPINC1P01008 464 aa15.65■□□□□ 0.1
HERPUD1-204ENST00000439977 SFPQP23246 707 aaKnown RBP eCLIP15.65■□□□□ 0.1
HERPUD1-204ENST00000439977 PTPAQ15257 358 aa15.65■□□□□ 0.1
HERPUD1-204ENST00000439977 NUP133Q8WUM0 1156 aa15.65■□□□□ 0.1
HERPUD1-204ENST00000439977 LAMB4A4D0S4 1761 aa15.65■□□□□ 0.1
HERPUD1-204ENST00000439977 NUP188Q5SRE5 1749 aa15.65■□□□□ 0.1
HERPUD1-204ENST00000439977 SOS2Q07890 1332 aaPredicted RBP15.65■□□□□ 0.1
HERPUD1-204ENST00000439977 WTIPA6NIX2 430 aaPredicted RBP15.65■□□□□ 0.1
HERPUD1-204ENST00000439977 PDE8AO60658 829 aa15.65■□□□□ 0.1
HERPUD1-204ENST00000439977 PDILTQ8N807 584 aa15.65■□□□□ 0.1
HERPUD1-204ENST00000439977 PUM3Q15397 648 aaKnown RBP15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 SYT10Q6XYQ8 523 aa15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 MPHOSPH8Q99549 860 aa15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 MAP3K14Q99558 947 aa15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 HSD3B7Q9H2F3 369 aa15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 ZNF335Q9H4Z2 1342 aaPredicted RBP15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 hCG_1642624A0A1W2PR95 340 aa15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 CDKL5O76039 1030 aa15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 ZSCAN20P17040 1043 aaPredicted RBP15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 TDO2P48775 406 aa15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 CFAP100Q494V2 611 aa15.64■□□□□ 0.09
HERPUD1-204ENST00000439977 CNNM3Q8NE01 707 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms