RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 AACSQ86V21 672 aa12.81□□□□□ -0.36
MCF2L-216ENST00000439475 ANKRD13AQ8IZ07 590 aa12.81□□□□□ -0.36
MCF2L-216ENST00000439475 FAM151AQ8WW52 585 aa12.81□□□□□ -0.36
MCF2L-216ENST00000439475 EAF2Q96CJ1 260 aaPredicted RBP12.81□□□□□ -0.36
MCF2L-216ENST00000439475 NOL10Q9BSC4 688 aaKnown RBP12.81□□□□□ -0.36
MCF2L-216ENST00000439475 FAM155AB1AL88 458 aaPredicted RBP12.8□□□□□ -0.36
MCF2L-216ENST00000439475 USP2O75604 605 aaPredicted RBP12.8□□□□□ -0.36
MCF2L-216ENST00000439475 MAP4K4O95819 1239 aaPredicted RBP12.8□□□□□ -0.36
MCF2L-216ENST00000439475 IFIT2P09913 472 aaKnown RBP12.8□□□□□ -0.36
MCF2L-216ENST00000439475 RRP1P56182 461 aaKnown RBP12.8□□□□□ -0.36
MCF2L-216ENST00000439475 LDLRAD1Q5T700 205 aa12.8□□□□□ -0.36
MCF2L-216ENST00000439475 DCAF15Q66K64 600 aa12.8□□□□□ -0.36
MCF2L-216ENST00000439475 CDC42EP5Q6NZY7 148 aa12.8□□□□□ -0.36
MCF2L-216ENST00000439475 RASAL3Q86YV0 1011 aa12.8□□□□□ -0.36
MCF2L-216ENST00000439475 TMEM39BQ9GZU3 492 aa12.8□□□□□ -0.36
MCF2L-216ENST00000439475 IL1RAPL2Q9NP60 686 aa12.8□□□□□ -0.36
MCF2L-216ENST00000439475 PRDM10Q9NQV6 1147 aa12.8□□□□□ -0.36
MCF2L-216ENST00000439475 DBNLQ9UJU6 430 aaKnown RBP12.8□□□□□ -0.36
MCF2L-216ENST00000439475 AOX1Q06278 1338 aa12.8□□□□□ -0.36
MCF2L-216ENST00000439475 APBB1O00213 710 aa12.79□□□□□ -0.36
MCF2L-216ENST00000439475 BAG3O95817 575 aa12.79□□□□□ -0.36
MCF2L-216ENST00000439475 CACNB3P54284 484 aa12.79□□□□□ -0.36
MCF2L-216ENST00000439475 INHBEP58166 350 aa12.79□□□□□ -0.36
MCF2L-216ENST00000439475 MECOMQ03112 1051 aa12.79□□□□□ -0.36
MCF2L-216ENST00000439475 TBC1D9Q6ZT07 1266 aa12.79□□□□□ -0.36
MCF2L-216ENST00000439475 SIRT2Q8IXJ6 389 aa12.79□□□□□ -0.36
MCF2L-216ENST00000439475 SNRKQ9NRH2 765 aa12.79□□□□□ -0.36
MCF2L-216ENST00000439475 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.79□□□□□ -0.36
MCF2L-216ENST00000439475 MYH2Q9UKX2 1941 aa12.79□□□□□ -0.36
MCF2L-216ENST00000439475 GAKO14976 1311 aa12.79□□□□□ -0.36
MCF2L-216ENST00000439475 AK9Q5TCS8 1911 aa12.78□□□□□ -0.36
MCF2L-216ENST00000439475 GPR75-ASB3A0A0A6YYF3 556 aa12.78□□□□□ -0.36
MCF2L-216ENST00000439475 ENTPD3O75355 529 aa12.78□□□□□ -0.36
MCF2L-216ENST00000439475 BTDP43251 543 aa12.78□□□□□ -0.36
MCF2L-216ENST00000439475 LBX1P52954 281 aa12.78□□□□□ -0.36
MCF2L-216ENST00000439475 MAP3K9P80192 1104 aa12.78□□□□□ -0.36
MCF2L-216ENST00000439475 SREBF2Q12772 1141 aa12.78□□□□□ -0.36
MCF2L-216ENST00000439475 NAA16Q6N069 864 aaPredicted RBP12.78□□□□□ -0.36
MCF2L-216ENST00000439475 NSUN4Q96CB9 384 aaKnown RBP12.78□□□□□ -0.36
MCF2L-216ENST00000439475 TEPSINQ96N21 525 aa12.78□□□□□ -0.36
MCF2L-216ENST00000439475 CSRNP1Q96S65 589 aa12.78□□□□□ -0.36
MCF2L-216ENST00000439475 CSADQ9Y600 493 aa12.78□□□□□ -0.36
MCF2L-216ENST00000439475 MROH7-TTC4A0A0A0MT08 1334 aa12.78□□□□□ -0.36
MCF2L-216ENST00000439475 MANSC4A6NHS7 340 aaPredicted RBP12.77□□□□□ -0.37
MCF2L-216ENST00000439475 HSPA8P11142 646 aaKnown RBP12.77□□□□□ -0.37
MCF2L-216ENST00000439475 ZAP70P43403 619 aa12.77□□□□□ -0.37
MCF2L-216ENST00000439475 TCP10Q12799 353 aa12.77□□□□□ -0.37
MCF2L-216ENST00000439475 PI16Q6UXB8 463 aa12.77□□□□□ -0.37
MCF2L-216ENST00000439475 ZSCAN29Q8IWY8 852 aaPredicted RBP12.77□□□□□ -0.37
MCF2L-216ENST00000439475 ZIC5Q96T25 663 aa12.77□□□□□ -0.37
MCF2L-216ENST00000439475 IDI2Q9BXS1 227 aa12.77□□□□□ -0.37
MCF2L-216ENST00000439475 ZNF341Q9BYN7 854 aa12.77□□□□□ -0.37
MCF2L-216ENST00000439475 LRRCC1Q9C099 1032 aa12.77□□□□□ -0.37
MCF2L-216ENST00000439475 BCL11AQ9H165 835 aa12.77□□□□□ -0.37
MCF2L-216ENST00000439475 SAGE1Q9NXZ1 904 aa12.77□□□□□ -0.37
MCF2L-216ENST00000439475 FZD1Q9UP38 647 aa12.77□□□□□ -0.37
MCF2L-216ENST00000439475 AKAP11Q9UKA4 1901 aa12.76□□□□□ -0.37
MCF2L-216ENST00000439475 CYP2E1P05181 493 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-216ENST00000439475 ZBTB48P10074 688 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-216ENST00000439475 PLCG2P16885 1265 aa12.76□□□□□ -0.37
MCF2L-216ENST00000439475 MAP3K12Q12852 859 aa12.76□□□□□ -0.37
MCF2L-216ENST00000439475 TTF1Q15361 905 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-216ENST00000439475 SPRYD7Q5W111 196 aa12.76□□□□□ -0.37
MCF2L-216ENST00000439475 TMED8Q6PL24 325 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-216ENST00000439475 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.76□□□□□ -0.37
MCF2L-216ENST00000439475 TLR7Q9NYK1 1049 aaKnown RBP12.76□□□□□ -0.37
MCF2L-216ENST00000439475 RPAP1Q9BWH6 1393 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-216ENST00000439475 THSD7BQ9C0I4 1608 aa12.76□□□□□ -0.37
MCF2L-216ENST00000439475 NPM3O75607 178 aaKnown RBP12.75□□□□□ -0.37
MCF2L-216ENST00000439475 TM4SF4P48230 202 aa12.75□□□□□ -0.37
MCF2L-216ENST00000439475 RGS3P49796 1198 aa12.75□□□□□ -0.37
MCF2L-216ENST00000439475 NFIAQ12857 509 aa12.75□□□□□ -0.37
MCF2L-216ENST00000439475 MKRN3Q13064 507 aaKnown RBP12.75□□□□□ -0.37
MCF2L-216ENST00000439475 AAMPQ13685 434 aa12.75□□□□□ -0.37
MCF2L-216ENST00000439475 COL13A1Q5TAT6 717 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-216ENST00000439475 OTUD7BQ6GQQ9 843 aa12.75□□□□□ -0.37
MCF2L-216ENST00000439475 CERS3Q8IU89 383 aa12.75□□□□□ -0.37
MCF2L-216ENST00000439475 WNK4Q96J92 1243 aa12.75□□□□□ -0.37
MCF2L-216ENST00000439475 DCTPP1Q9H773 170 aa12.75□□□□□ -0.37
MCF2L-216ENST00000439475 ZBTB47Q9UFB7 747 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-216ENST00000439475 TRPA1O75762 1119 aa12.74□□□□□ -0.37
MCF2L-216ENST00000439475 IDH1O75874 414 aaKnown RBP12.74□□□□□ -0.37
MCF2L-216ENST00000439475 ALDH1A1P00352 501 aa12.74□□□□□ -0.37
MCF2L-216ENST00000439475 PICALMQ13492 652 aa12.74□□□□□ -0.37
MCF2L-216ENST00000439475 MIGA2Q7L4E1 593 aa12.74□□□□□ -0.37
MCF2L-216ENST00000439475 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.74□□□□□ -0.37
MCF2L-216ENST00000439475 CLMNQ96JQ2 1002 aa12.74□□□□□ -0.37
MCF2L-216ENST00000439475 WRNIP1Q96S55 665 aa12.74□□□□□ -0.37
MCF2L-216ENST00000439475 ELP3Q9H9T3 547 aa12.74□□□□□ -0.37
MCF2L-216ENST00000439475 RNF186Q9NXI6 227 aa12.74□□□□□ -0.37
MCF2L-216ENST00000439475 FAM198AQ9UFP1 575 aa12.74□□□□□ -0.37
MCF2L-216ENST00000439475 CYP7A1P22680 504 aa12.73□□□□□ -0.37
MCF2L-216ENST00000439475 PPP4CP60510 307 aa12.73□□□□□ -0.37
MCF2L-216ENST00000439475 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-216ENST00000439475 CDAN1Q8IWY9 1227 aa12.73□□□□□ -0.37
MCF2L-216ENST00000439475 TEX11Q8IYF3 940 aa12.73□□□□□ -0.37
MCF2L-216ENST00000439475 TNS4Q8IZW8 715 aa12.73□□□□□ -0.37
MCF2L-216ENST00000439475 OPTNQ96CV9 577 aa12.73□□□□□ -0.37
MCF2L-216ENST00000439475 CRBNQ96SW2 442 aa12.73□□□□□ -0.37
MCF2L-216ENST00000439475 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms