RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 ERO1AQ96HE7 468 aa22.66■■□□□ 1.22
GTF3A-204ENST00000438571 API5Q9BZZ5 524 aaKnown RBP22.66■■□□□ 1.22
GTF3A-204ENST00000438571 TNNQ9UQP3 1299 aa22.66■■□□□ 1.22
GTF3A-204ENST00000438571 DOCK1Q14185 1865 aa22.65■■□□□ 1.22
GTF3A-204ENST00000438571 RARSP54136 660 aaKnown RBP22.65■■□□□ 1.22
GTF3A-204ENST00000438571 SP3Q02447 781 aa22.65■■□□□ 1.22
GTF3A-204ENST00000438571 NFIAQ12857 509 aa22.65■■□□□ 1.22
GTF3A-204ENST00000438571 TAF1CQ15572 869 aaPredicted RBP22.65■■□□□ 1.22
GTF3A-204ENST00000438571 MIGA2Q7L4E1 593 aa22.65■■□□□ 1.22
GTF3A-204ENST00000438571 CEP126Q9P2H0 1117 aa22.65■■□□□ 1.22
GTF3A-204ENST00000438571 PTPN22Q9Y2R2 807 aa22.65■■□□□ 1.22
GTF3A-204ENST00000438571 POTEFA5A3E0 1075 aa22.64■■□□□ 1.21
GTF3A-204ENST00000438571 CT47B1P0C2W7 299 aaPredicted RBP22.64■■□□□ 1.21
GTF3A-204ENST00000438571 GTF2A2P52657 109 aa22.64■■□□□ 1.21
GTF3A-204ENST00000438571 TCP10Q12799 353 aa22.64■■□□□ 1.21
GTF3A-204ENST00000438571 FKBP1CQ5VVH2 108 aa22.64■■□□□ 1.21
GTF3A-204ENST00000438571 CDC42EP5Q6NZY7 148 aa22.64■■□□□ 1.21
GTF3A-204ENST00000438571 ATAD5Q96QE3 1844 aa22.64■■□□□ 1.21
GTF3A-204ENST00000438571 CDK5RAP2Q96SN8 1893 aa22.63■■□□□ 1.21
GTF3A-204ENST00000438571 INPP5BP32019 993 aa22.63■■□□□ 1.21
GTF3A-204ENST00000438571 FBXO3Q9UK99 471 aa22.63■■□□□ 1.21
GTF3A-204ENST00000438571 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.63■■□□□ 1.21
GTF3A-204ENST00000438571 IRF6O14896 467 aa22.62■■□□□ 1.21
GTF3A-204ENST00000438571 IL15P40933 162 aaPredicted RBP22.62■■□□□ 1.21
GTF3A-204ENST00000438571 EFCC1Q9HA90 598 aa22.62■■□□□ 1.21
GTF3A-204ENST00000438571 COPRSQ9NQ92 184 aa22.62■■□□□ 1.21
GTF3A-204ENST00000438571 ERO1BQ86YB8 467 aa22.61■■□□□ 1.21
GTF3A-204ENST00000438571 FAM151AQ8WW52 585 aa22.61■■□□□ 1.21
GTF3A-204ENST00000438571 FAM198AQ9UFP1 575 aa22.61■■□□□ 1.21
GTF3A-204ENST00000438571 SALL1Q9NSC2 1324 aa22.6■■□□□ 1.21
GTF3A-204ENST00000438571 BTBD19C9JJ37 291 aa22.6■■□□□ 1.21
GTF3A-204ENST00000438571 CCER2I3L3R5 266 aa22.6■■□□□ 1.21
GTF3A-204ENST00000438571 LDHBP07195 334 aaKnown RBP22.6■■□□□ 1.21
GTF3A-204ENST00000438571 CCDC102BQ68D86 513 aa22.6■■□□□ 1.21
GTF3A-204ENST00000438571 ZFPM1Q8IX07 1006 aa22.6■■□□□ 1.21
GTF3A-204ENST00000438571 ZNF341Q9BYN7 854 aa22.6■■□□□ 1.21
GTF3A-204ENST00000438571 ZFYVE28Q9HCC9 887 aa22.6■■□□□ 1.21
GTF3A-204ENST00000438571 RFX7Q2KHR2 1363 aa22.6■■□□□ 1.21
GTF3A-204ENST00000438571 TIMM10P62072 90 aa22.59■■□□□ 1.21
GTF3A-204ENST00000438571 PPIL2Q13356 520 aa22.59■■□□□ 1.21
GTF3A-204ENST00000438571 RASGRF1Q13972 1273 aa22.59■■□□□ 1.21
GTF3A-204ENST00000438571 DCAF15Q66K64 600 aa22.59■■□□□ 1.21
GTF3A-204ENST00000438571 INTS3Q68E01 1043 aaKnown RBP22.59■■□□□ 1.21
GTF3A-204ENST00000438571 ARHGAP39Q9C0H5 1083 aa22.59■■□□□ 1.21
GTF3A-204ENST00000438571 SLURP2P0DP57 97 aa22.58■■□□□ 1.21
GTF3A-204ENST00000438571 PRPF38BQ5VTL8 546 aaKnown RBP22.58■■□□□ 1.21
GTF3A-204ENST00000438571 USP40Q9NVE5 1235 aa22.58■■□□□ 1.21
GTF3A-204ENST00000438571 DENND2AQ9ULE3 1009 aa22.58■■□□□ 1.21
GTF3A-204ENST00000438571 ATRNL1Q5VV63 1379 aa22.58■■□□□ 1.21
GTF3A-204ENST00000438571 MAST2Q6P0Q8 1798 aa22.58■■□□□ 1.2
GTF3A-204ENST00000438571 ECM2O94769 699 aaPredicted RBP22.57■■□□□ 1.2
GTF3A-204ENST00000438571 GNL3LQ9NVN8 582 aaKnown RBP22.57■■□□□ 1.2
GTF3A-204ENST00000438571 PTCH2Q9Y6C5 1203 aa22.57■■□□□ 1.2
GTF3A-204ENST00000438571 SIPA1L1O43166 1804 aa22.57■■□□□ 1.2
GTF3A-204ENST00000438571 A0A1B0GUL7 405 aa22.56■■□□□ 1.2
GTF3A-204ENST00000438571 SRGAP3O43295 1099 aa22.56■■□□□ 1.2
GTF3A-204ENST00000438571 BCAR3O75815 825 aa22.56■■□□□ 1.2
GTF3A-204ENST00000438571 CETPP11597 493 aa22.56■■□□□ 1.2
GTF3A-204ENST00000438571 TFCP2Q12800 502 aa22.56■■□□□ 1.2
GTF3A-204ENST00000438571 SNAPC2Q13487 334 aa22.56■■□□□ 1.2
GTF3A-204ENST00000438571 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.56■■□□□ 1.2
GTF3A-204ENST00000438571 ARMC5Q96C12 935 aa22.56■■□□□ 1.2
GTF3A-204ENST00000438571 HOOK2Q96ED9 719 aa22.56■■□□□ 1.2
GTF3A-204ENST00000438571 ZNF112Q9UJU3 913 aa22.56■■□□□ 1.2
GTF3A-204ENST00000438571 FOCADQ5VW36 1801 aa22.56■■□□□ 1.2
GTF3A-204ENST00000438571 GAKO14976 1311 aa22.56■■□□□ 1.2
GTF3A-204ENST00000438571 SEMA3EO15041 775 aa22.55■■□□□ 1.2
GTF3A-204ENST00000438571 TRIM27P14373 513 aa22.55■■□□□ 1.2
GTF3A-204ENST00000438571 PPATQ06203 517 aa22.55■■□□□ 1.2
GTF3A-204ENST00000438571 ARHGAP45Q92619 1136 aa22.55■■□□□ 1.2
GTF3A-204ENST00000438571 DOCK3Q8IZD9 2030 aa22.55■■□□□ 1.2
GTF3A-204ENST00000438571 TLR2O60603 784 aa22.54■■□□□ 1.2
GTF3A-204ENST00000438571 RGS3P49796 1198 aa22.54■■□□□ 1.2
GTF3A-204ENST00000438571 MTX1Q13505 466 aa22.54■■□□□ 1.2
GTF3A-204ENST00000438571 SH3BP5LQ7L8J4 393 aa22.54■■□□□ 1.2
GTF3A-204ENST00000438571 XAGE2Q96GT9 111 aa22.54■■□□□ 1.2
GTF3A-204ENST00000438571 ABCF2Q9UG63 623 aa22.54■■□□□ 1.2
GTF3A-204ENST00000438571 EN2P19622 333 aaPredicted RBP22.53■■□□□ 1.2
GTF3A-204ENST00000438571 CTGFP29279 349 aa22.53■■□□□ 1.2
GTF3A-204ENST00000438571 MOGSQ13724 837 aa22.53■■□□□ 1.2
GTF3A-204ENST00000438571 PI16Q6UXB8 463 aa22.53■■□□□ 1.2
GTF3A-204ENST00000438571 ZNF384Q8TF68 577 aa22.53■■□□□ 1.2
GTF3A-204ENST00000438571 CLUAP1Q96AJ1 413 aa22.53■■□□□ 1.2
GTF3A-204ENST00000438571 DDX4Q9NQI0 724 aaKnown RBP22.53■■□□□ 1.2
GTF3A-204ENST00000438571 PNMA6EA0A0J9YXQ4 647 aa22.52■■□□□ 1.2
GTF3A-204ENST00000438571 ZBTB22O15209 634 aa22.52■■□□□ 1.2
GTF3A-204ENST00000438571 GNAI3P08754 354 aa22.52■■□□□ 1.2
GTF3A-204ENST00000438571 NOL9Q5SY16 702 aaKnown RBP22.52■■□□□ 1.2
GTF3A-204ENST00000438571 DZIP1Q86YF9 867 aaKnown RBP22.52■■□□□ 1.2
GTF3A-204ENST00000438571 FRAT1Q92837 279 aaPredicted RBP22.52■■□□□ 1.2
GTF3A-204ENST00000438571 ZNF333Q96JL9 665 aa22.52■■□□□ 1.2
GTF3A-204ENST00000438571 CPA4Q9UI42 421 aa22.52■■□□□ 1.2
GTF3A-204ENST00000438571 KCNH4Q9UQ05 1017 aa22.52■■□□□ 1.2
GTF3A-204ENST00000438571 HDAC5Q9UQL6 1122 aa22.52■■□□□ 1.2
GTF3A-204ENST00000438571 ADGRA2Q96PE1 1338 aa22.52■■□□□ 1.2
GTF3A-204ENST00000438571 LACTBP83111 547 aaPredicted RBP22.51■■□□□ 1.19
GTF3A-204ENST00000438571 IDI2Q9BXS1 227 aa22.51■■□□□ 1.19
GTF3A-204ENST00000438571 ZCCHC17Q9NP64 241 aaKnown RBP22.51■■□□□ 1.19
GTF3A-204ENST00000438571 PDS5AQ29RF7 1337 aaKnown RBP22.51■■□□□ 1.19
GTF3A-204ENST00000438571 LOC285556D6RIA3 1793 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms