RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 GBP3Q9H0R5 595 aa8.47□□□□□ -1.05
SYNPO2-203ENST00000434046 RCOR1Q9UKL0 485 aa8.47□□□□□ -1.05
SYNPO2-203ENST00000434046 C1orf167Q5SNV9 1468 aa8.47□□□□□ -1.05
SYNPO2-203ENST00000434046 IDH1O75874 414 aaKnown RBP8.47□□□□□ -1.05
SYNPO2-203ENST00000434046 RDXP35241 583 aaKnown RBP8.47□□□□□ -1.05
SYNPO2-203ENST00000434046 TXLNAP40222 546 aa8.47□□□□□ -1.05
SYNPO2-203ENST00000434046 MAGEA9P43362 315 aa8.47□□□□□ -1.05
SYNPO2-203ENST00000434046 MYL5Q02045 173 aa8.47□□□□□ -1.05
SYNPO2-203ENST00000434046 BRINP3Q76B58 766 aa8.47□□□□□ -1.05
SYNPO2-203ENST00000434046 CCDC91Q7Z6B0 441 aa8.47□□□□□ -1.05
SYNPO2-203ENST00000434046 CNNM3Q8NE01 707 aa8.47□□□□□ -1.05
SYNPO2-203ENST00000434046 SPATA31A3Q5VYP0 1347 aa8.47□□□□□ -1.05
SYNPO2-203ENST00000434046 H3BQF6 201 aa8.46□□□□□ -1.05
SYNPO2-203ENST00000434046 IL15P40933 162 aaPredicted RBP8.46□□□□□ -1.05
SYNPO2-203ENST00000434046 NLRP12P59046 1061 aa8.46□□□□□ -1.05
SYNPO2-203ENST00000434046 SCRN1Q12765 414 aa8.46□□□□□ -1.05
SYNPO2-203ENST00000434046 FOXR1Q6PIV2 292 aa8.46□□□□□ -1.05
SYNPO2-203ENST00000434046 ZNF589Q86UQ0 364 aaPredicted RBP8.46□□□□□ -1.05
SYNPO2-203ENST00000434046 CAGE1Q8TC20 777 aa8.46□□□□□ -1.05
SYNPO2-203ENST00000434046 NRKQ7Z2Y5 1582 aa8.46□□□□□ -1.05
SYNPO2-203ENST00000434046 KNDC1Q76NI1 1749 aa8.46□□□□□ -1.05
SYNPO2-203ENST00000434046 ANKRD18BA2A2Z9 1011 aa8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 CYP27B1O15528 508 aa8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 CCDC175P0C221 793 aa8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 DNAJC21Q5F1R6 531 aaKnown RBP8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 NFXL1Q6ZNB6 911 aa8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 ANKRD20A12PQ8NF67 263 aa8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 U3KPZ7 1027 aaPredicted RBP8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 CTAGE15A4D2H0 777 aa8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 TMEM232C9JQI7 657 aa8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 N4BP1O75113 896 aaKnown RBP8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 CTAGE8P0CG41 777 aa8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 USP8P40818 1118 aa8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 BRD3Q15059 726 aa8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 CTAGE6Q86UF2 777 aa8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 TEX2Q8IWB9 1127 aa8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 CTAGE4Q8IX94 777 aa8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 BANK1Q8NDB2 785 aa8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 KCNG4Q8TDN1 519 aa8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 EAF2Q96CJ1 260 aaPredicted RBP8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 ACSBG1Q96GR2 724 aa8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 IRX2Q9BZI1 471 aaPredicted RBP8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 FAM204AQ9H8W3 233 aa8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 SUGCTQ9HAC7 445 aa8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 FANCLQ9NW38 375 aa8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 PARP3Q9Y6F1 533 aa8.46□□□□□ -1.06
SYNPO2-203ENST00000434046 WDR17Q8IZU2 1322 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 CCDC151A5D8V7 595 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 ERVV-2B6SEH9 535 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 POTEB2H3BUK9 544 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 DNAJC10Q8IXB1 793 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 CEP112Q8N8E3 955 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 DPF2Q92785 391 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 FAM53CQ9NYF3 392 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 CLIC4Q9Y696 253 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 ANKRD26Q9UPS8 1709 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 KIAA0754O94854 1291 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 HAND2P61296 217 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 TIMM10P62072 90 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 DDB1Q16531 1140 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 CCDC93Q567U6 631 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 BICDL1Q6ZP65 573 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 TTLL7Q6ZT98 887 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 PACS2Q86VP3 889 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 GIMAP7Q8NHV1 300 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 NCAPGQ9BPX3 1015 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 DBNDD2Q9BQY9 259 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 FUT8Q9BYC5 575 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 TLR7Q9NYK1 1049 aaKnown RBP8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 MKRN1Q9UHC7 482 aaKnown RBP8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 NCAPD2Q15021 1401 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 MAP2K2P36507 400 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 NOP2P46087 812 aaKnown RBP8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 TRIM29Q14134 588 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 ADALQ6DHV7 355 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 NAA16Q6N069 864 aaPredicted RBP8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 AFAP1L1Q8TED9 768 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 FAM89AQ96GI7 184 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 NGLY1Q96IV0 654 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 RUFY1Q96T51 708 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 ABCB6Q9NP58 842 aa8.45□□□□□ -1.06
SYNPO2-203ENST00000434046 SHTN1A0MZ66 631 aa8.44□□□□□ -1.06
SYNPO2-203ENST00000434046 CTAGE9A4FU28 777 aa8.44□□□□□ -1.06
SYNPO2-203ENST00000434046 EBAG9O00559 213 aa8.44□□□□□ -1.06
SYNPO2-203ENST00000434046 ERLIN2O94905 339 aa8.44□□□□□ -1.06
SYNPO2-203ENST00000434046 GUCY2CP25092 1073 aa8.44□□□□□ -1.06
SYNPO2-203ENST00000434046 PNOCQ13519 176 aa8.44□□□□□ -1.06
SYNPO2-203ENST00000434046 TNNI3KQ59H18 835 aa8.44□□□□□ -1.06
SYNPO2-203ENST00000434046 CT47A1Q5JQC4 288 aaPredicted RBP8.44□□□□□ -1.06
SYNPO2-203ENST00000434046 TRMT44Q8IYL2 757 aaKnown RBP8.44□□□□□ -1.06
SYNPO2-203ENST00000434046 JMYQ8N9B5 988 aa8.44□□□□□ -1.06
SYNPO2-203ENST00000434046 BRMS1Q9HCU9 246 aa8.44□□□□□ -1.06
SYNPO2-203ENST00000434046 FPGT-TNNI3KV9GXZ4 949 aa8.44□□□□□ -1.06
SYNPO2-203ENST00000434046 IGHMBP2P38935 993 aaKnown RBP8.44□□□□□ -1.06
SYNPO2-203ENST00000434046 POLA2Q14181 598 aa8.44□□□□□ -1.06
SYNPO2-203ENST00000434046 TOGARAM2Q6ZUX3 1019 aa8.44□□□□□ -1.06
SYNPO2-203ENST00000434046 CARD10Q9BWT7 1032 aa8.44□□□□□ -1.06
SYNPO2-203ENST00000434046 GOLGA8BA8MQT2 603 aa8.43□□□□□ -1.06
SYNPO2-203ENST00000434046 PFKFB1P16118 471 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms