RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 SPDYE6P0CI01 402 aa18.5■□□□□ 0.55
CNOT9-205ENST00000433439 MMP14P50281 582 aa18.5■□□□□ 0.55
CNOT9-205ENST00000433439 HIRAP54198 1017 aaPredicted RBP18.5■□□□□ 0.55
CNOT9-205ENST00000433439 UBE3CQ15386 1083 aa18.5■□□□□ 0.55
CNOT9-205ENST00000433439 APPBP2Q92624 585 aa18.5■□□□□ 0.55
CNOT9-205ENST00000433439 SEC62Q99442 399 aaKnown RBP18.5■□□□□ 0.55
CNOT9-205ENST00000433439 MRIQ9BWK5 157 aa18.5■□□□□ 0.55
CNOT9-205ENST00000433439 USP40Q9NVE5 1235 aa18.5■□□□□ 0.55
CNOT9-205ENST00000433439 ASTN2O75129 1339 aaPredicted RBP18.49■□□□□ 0.55
CNOT9-205ENST00000433439 MAGEB6P1A0A0J9YX57 407 aa18.49■□□□□ 0.55
CNOT9-205ENST00000433439 MYO1BO43795 1136 aa18.49■□□□□ 0.55
CNOT9-205ENST00000433439 IGSF3O75054 1194 aa18.49■□□□□ 0.55
CNOT9-205ENST00000433439 APLP1P51693 650 aa18.49■□□□□ 0.55
CNOT9-205ENST00000433439 NMIQ13287 307 aaPredicted RBP18.49■□□□□ 0.55
CNOT9-205ENST00000433439 APOBEC3HQ6NTF7 200 aaKnown RBP18.49■□□□□ 0.55
CNOT9-205ENST00000433439 FAM163AQ96GL9 167 aaPredicted RBP18.49■□□□□ 0.55
CNOT9-205ENST00000433439 FAM227BQ96M60 508 aa18.49■□□□□ 0.55
CNOT9-205ENST00000433439 VEZTQ9HBM0 779 aa18.49■□□□□ 0.55
CNOT9-205ENST00000433439 GPR75-ASB3A0A0A6YYF3 556 aa18.48■□□□□ 0.55
CNOT9-205ENST00000433439 M0R2C6 588 aa18.48■□□□□ 0.55
CNOT9-205ENST00000433439 HIP1O00291 1037 aa18.48■□□□□ 0.55
CNOT9-205ENST00000433439 MBD4O95243 580 aa18.48■□□□□ 0.55
CNOT9-205ENST00000433439 CACNB3P54284 484 aa18.48■□□□□ 0.55
CNOT9-205ENST00000433439 ZMYM1Q5SVZ6 1142 aa18.48■□□□□ 0.55
CNOT9-205ENST00000433439 CDC42EP5Q6NZY7 148 aa18.48■□□□□ 0.55
CNOT9-205ENST00000433439 CWC27Q6UX04 472 aaKnown RBP18.48■□□□□ 0.55
CNOT9-205ENST00000433439 USP50Q70EL3 339 aaPredicted RBP18.48■□□□□ 0.55
CNOT9-205ENST00000433439 DNAJC5GQ8N7S2 189 aa18.48■□□□□ 0.55
CNOT9-205ENST00000433439 MTMR14Q8NCE2 650 aa18.48■□□□□ 0.55
CNOT9-205ENST00000433439 OSBP2Q969R2 916 aa18.48■□□□□ 0.55
CNOT9-205ENST00000433439 AIDAQ96BJ3 306 aa18.48■□□□□ 0.55
CNOT9-205ENST00000433439 PUS7LQ9H0K6 701 aaKnown RBP18.48■□□□□ 0.55
CNOT9-205ENST00000433439 ARMT1Q9H993 441 aa18.48■□□□□ 0.55
CNOT9-205ENST00000433439 SCAF8Q9UPN6 1271 aaKnown RBP18.48■□□□□ 0.55
CNOT9-205ENST00000433439 A0A0D9SFI3 127 aa18.47■□□□□ 0.55
CNOT9-205ENST00000433439 CCDC129Q6ZRS4 1044 aa18.47■□□□□ 0.55
CNOT9-205ENST00000433439 PNMA8AQ86V59 439 aaPredicted RBP18.47■□□□□ 0.55
CNOT9-205ENST00000433439 LCORLQ8N3X6 602 aa18.47■□□□□ 0.55
CNOT9-205ENST00000433439 SH3RF3Q8TEJ3 882 aaPredicted RBP18.47■□□□□ 0.55
CNOT9-205ENST00000433439 ZBED3Q96IU2 234 aaPredicted RBP18.47■□□□□ 0.55
CNOT9-205ENST00000433439 GGA3Q9NZ52 723 aa18.47■□□□□ 0.55
CNOT9-205ENST00000433439 TMOD2Q9NZR1 351 aa18.47■□□□□ 0.55
CNOT9-205ENST00000433439 ZNF70Q9UC06 446 aaPredicted RBP18.47■□□□□ 0.55
CNOT9-205ENST00000433439 RFX7Q2KHR2 1363 aa18.46■□□□□ 0.55
CNOT9-205ENST00000433439 TCP10L2B9ZVM9 353 aa18.46■□□□□ 0.55
CNOT9-205ENST00000433439 SLC34A2O95436 690 aa18.46■□□□□ 0.55
CNOT9-205ENST00000433439 POTEIP0CG38 1075 aa18.46■□□□□ 0.55
CNOT9-205ENST00000433439 POTEJP0CG39 1038 aa18.46■□□□□ 0.55
CNOT9-205ENST00000433439 CHMLP26374 656 aa18.46■□□□□ 0.55
CNOT9-205ENST00000433439 ANGEL2Q5VTE6 544 aaKnown RBP18.46■□□□□ 0.55
CNOT9-205ENST00000433439 TMED8Q6PL24 325 aaPredicted RBP18.46■□□□□ 0.55
CNOT9-205ENST00000433439 TEX11Q8IYF3 940 aa18.46■□□□□ 0.55
CNOT9-205ENST00000433439 GPAA1O43292 621 aa18.45■□□□□ 0.54
CNOT9-205ENST00000433439 CDC45O75419 566 aa18.45■□□□□ 0.54
CNOT9-205ENST00000433439 PLCG2P16885 1265 aa18.45■□□□□ 0.54
CNOT9-205ENST00000433439 PICALMQ13492 652 aa18.45■□□□□ 0.54
CNOT9-205ENST00000433439 SPDYE2Q495Y8 402 aa18.45■□□□□ 0.54
CNOT9-205ENST00000433439 DCPSQ96C86 337 aaKnown RBP18.45■□□□□ 0.54
CNOT9-205ENST00000433439 RIOK1Q9BRS2 568 aaKnown RBP18.45■□□□□ 0.54
CNOT9-205ENST00000433439 USP5P45974 858 aa18.44■□□□□ 0.54
CNOT9-205ENST00000433439 RHBDL3P58872 404 aa18.44■□□□□ 0.54
CNOT9-205ENST00000433439 PPP4CP60510 307 aa18.44■□□□□ 0.54
CNOT9-205ENST00000433439 TCP10Q12799 353 aa18.44■□□□□ 0.54
CNOT9-205ENST00000433439 MCMDC2Q4G0Z9 681 aa18.44■□□□□ 0.54
CNOT9-205ENST00000433439 CASC1Q6TDU7 716 aa18.44■□□□□ 0.54
CNOT9-205ENST00000433439 TNS4Q8IZW8 715 aa18.44■□□□□ 0.54
CNOT9-205ENST00000433439 TGFBRAP1Q8WUH2 860 aa18.44■□□□□ 0.54
CNOT9-205ENST00000433439 RUFY2Q8WXA3 655 aa18.44■□□□□ 0.54
CNOT9-205ENST00000433439 HELLSQ9NRZ9 838 aa18.44■□□□□ 0.54
CNOT9-205ENST00000433439 PRKAB2O43741 272 aa18.43■□□□□ 0.54
CNOT9-205ENST00000433439 MAPKAPK5Q8IW41 473 aa18.43■□□□□ 0.54
CNOT9-205ENST00000433439 CRNKL1Q9BZJ0 848 aaKnown RBP18.43■□□□□ 0.54
CNOT9-205ENST00000433439 SLC4A4Q9Y6R1 1079 aa18.43■□□□□ 0.54
CNOT9-205ENST00000433439 KIF3CO14782 793 aa18.42■□□□□ 0.54
CNOT9-205ENST00000433439 NFIAQ12857 509 aa18.42■□□□□ 0.54
CNOT9-205ENST00000433439 MAP1SQ66K74 1059 aaPredicted RBP18.42■□□□□ 0.54
CNOT9-205ENST00000433439 ZNF589Q86UQ0 364 aaPredicted RBP18.42■□□□□ 0.54
CNOT9-205ENST00000433439 LDHDQ86WU2 507 aa18.42■□□□□ 0.54
CNOT9-205ENST00000433439 TICAM2Q86XR7 235 aa18.42■□□□□ 0.54
CNOT9-205ENST00000433439 SDR42E1Q8WUS8 393 aa18.42■□□□□ 0.54
CNOT9-205ENST00000433439 WDHD1O75717 1129 aaPredicted RBP18.41■□□□□ 0.54
CNOT9-205ENST00000433439 APPP05067 770 aa18.41■□□□□ 0.54
CNOT9-205ENST00000433439 CERS3Q8IU89 383 aa18.41■□□□□ 0.54
CNOT9-205ENST00000433439 APOBEC3FQ8IUX4 373 aaKnown RBP18.41■□□□□ 0.54
CNOT9-205ENST00000433439 SULF1Q8IWU6 871 aa18.41■□□□□ 0.54
CNOT9-205ENST00000433439 STRBPQ96SI9 672 aaKnown RBP18.41■□□□□ 0.54
CNOT9-205ENST00000433439 ECM29Q5VYK3 1845 aa18.41■□□□□ 0.54
CNOT9-205ENST00000433439 ADM5C9JUS6 153 aa18.4■□□□□ 0.54
CNOT9-205ENST00000433439 TNNI2P48788 182 aa18.4■□□□□ 0.54
CNOT9-205ENST00000433439 SLC4A8Q2Y0W8 1093 aa18.4■□□□□ 0.54
CNOT9-205ENST00000433439 KRT26Q7Z3Y9 468 aa18.4■□□□□ 0.54
CNOT9-205ENST00000433439 USP48Q86UV5 1035 aa18.4■□□□□ 0.54
CNOT9-205ENST00000433439 ZSCAN29Q8IWY8 852 aaPredicted RBP18.4■□□□□ 0.54
CNOT9-205ENST00000433439 ZC3H15Q8WU90 426 aaKnown RBP18.4■□□□□ 0.54
CNOT9-205ENST00000433439 GLIS2Q9BZE0 524 aaPredicted RBP18.4■□□□□ 0.54
CNOT9-205ENST00000433439 IL25Q9H293 177 aa18.4■□□□□ 0.54
CNOT9-205ENST00000433439 DDX4Q9NQI0 724 aaKnown RBP18.4■□□□□ 0.54
CNOT9-205ENST00000433439 SAP30BPQ9UHR5 308 aaKnown RBP18.4■□□□□ 0.54
CNOT9-205ENST00000433439 CCDC171Q6TFL3 1326 aa18.4■□□□□ 0.54
CNOT9-205ENST00000433439 POLR2AP24928 1970 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms