RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 PSME4Q14997 1843 aa21.77■■□□□ 1.08
HMGN1-206ENST00000431390 MBD4O95243 580 aa21.77■■□□□ 1.08
HMGN1-206ENST00000431390 ZKSCAN1P17029 563 aaPredicted RBP21.77■■□□□ 1.08
HMGN1-206ENST00000431390 EAPPQ56P03 285 aaPredicted RBP21.77■■□□□ 1.08
HMGN1-206ENST00000431390 TTLL5Q6EMB2 1281 aa21.77■■□□□ 1.08
HMGN1-206ENST00000431390 ADGRA1Q86SQ6 560 aa21.77■■□□□ 1.08
HMGN1-206ENST00000431390 MYH2Q9UKX2 1941 aa21.76■■□□□ 1.07
HMGN1-206ENST00000431390 RPAP1Q9BWH6 1393 aaPredicted RBP21.76■■□□□ 1.07
HMGN1-206ENST00000431390 SCN9AQ15858 1988 aa21.76■■□□□ 1.07
HMGN1-206ENST00000431390 MAGEB6P1A0A0J9YX57 407 aa21.76■■□□□ 1.07
HMGN1-206ENST00000431390 SLC27A2O14975 620 aa21.76■■□□□ 1.07
HMGN1-206ENST00000431390 FOXP2O15409 715 aa21.76■■□□□ 1.07
HMGN1-206ENST00000431390 FKBP1AP62942 108 aaKnown RBP21.76■■□□□ 1.07
HMGN1-206ENST00000431390 TSGA10IPQ3SY00 556 aa21.76■■□□□ 1.07
HMGN1-206ENST00000431390 CTNNA3Q9UI47 895 aa21.76■■□□□ 1.07
HMGN1-206ENST00000431390 LDHCP07864 332 aa21.75■■□□□ 1.07
HMGN1-206ENST00000431390 RASEFQ8IZ41 740 aa21.75■■□□□ 1.07
HMGN1-206ENST00000431390 RIOK1Q9BRS2 568 aaKnown RBP21.75■■□□□ 1.07
HMGN1-206ENST00000431390 ZMYM6O95789 1325 aa21.75■■□□□ 1.07
HMGN1-206ENST00000431390 ITGBL1O95965 494 aaPredicted RBP21.74■■□□□ 1.07
HMGN1-206ENST00000431390 STRIP1Q5VSL9 837 aa21.74■■□□□ 1.07
HMGN1-206ENST00000431390 LCORLQ8N3X6 602 aa21.74■■□□□ 1.07
HMGN1-206ENST00000431390 MIGA1Q8NAN2 632 aa21.74■■□□□ 1.07
HMGN1-206ENST00000431390 SNX21Q969T3 373 aa21.74■■□□□ 1.07
HMGN1-206ENST00000431390 ARMT1Q9H993 441 aa21.74■■□□□ 1.07
HMGN1-206ENST00000431390 TMEM88BA6NKF7 163 aa21.74■■□□□ 1.07
HMGN1-206ENST00000431390 PATL2C9JE40 543 aaKnown RBP21.74■■□□□ 1.07
HMGN1-206ENST00000431390 BECN1Q14457 450 aa21.74■■□□□ 1.07
HMGN1-206ENST00000431390 ALX1Q15699 326 aa21.74■■□□□ 1.07
HMGN1-206ENST00000431390 GRIK5Q16478 980 aa21.74■■□□□ 1.07
HMGN1-206ENST00000431390 SLF2Q8IX21 1173 aa21.74■■□□□ 1.07
HMGN1-206ENST00000431390 HACL1Q9UJ83 578 aa21.74■■□□□ 1.07
HMGN1-206ENST00000431390 LAMA4Q16363 1823 aa21.73■■□□□ 1.07
HMGN1-206ENST00000431390 VEGFBP49765 207 aa21.73■■□□□ 1.07
HMGN1-206ENST00000431390 KRT32Q14532 448 aa21.73■■□□□ 1.07
HMGN1-206ENST00000431390 FBXW7Q969H0 707 aa21.73■■□□□ 1.07
HMGN1-206ENST00000431390 TM6SF1Q9BZW5 370 aa21.73■■□□□ 1.07
HMGN1-206ENST00000431390 CLEC11AQ9Y240 323 aa21.73■■□□□ 1.07
HMGN1-206ENST00000431390 FGAP02671 866 aa21.72■■□□□ 1.07
HMGN1-206ENST00000431390 CYP21A2P08686 494 aa21.72■■□□□ 1.07
HMGN1-206ENST00000431390 EPHX2P34913 555 aa21.72■■□□□ 1.07
HMGN1-206ENST00000431390 CERS3Q8IU89 383 aa21.72■■□□□ 1.07
HMGN1-206ENST00000431390 LARGE2Q8N3Y3 721 aa21.72■■□□□ 1.07
HMGN1-206ENST00000431390 FAM163AQ96GL9 167 aaPredicted RBP21.72■■□□□ 1.07
HMGN1-206ENST00000431390 MROH7-TTC4A0A0A0MT08 1334 aa21.72■■□□□ 1.07
HMGN1-206ENST00000431390 USP17L3A6NCW0 530 aa21.71■■□□□ 1.07
HMGN1-206ENST00000431390 USP17L4A6NCW7 530 aa21.71■■□□□ 1.07
HMGN1-206ENST00000431390 IARSP41252 1262 aaKnown RBP21.71■■□□□ 1.07
HMGN1-206ENST00000431390 USP17L1Q7RTZ2 530 aa21.71■■□□□ 1.07
HMGN1-206ENST00000431390 CERS5Q8N5B7 392 aa21.71■■□□□ 1.07
HMGN1-206ENST00000431390 SLC4A4Q9Y6R1 1079 aa21.71■■□□□ 1.07
HMGN1-206ENST00000431390 ST18O60284 1047 aa21.7■■□□□ 1.06
HMGN1-206ENST00000431390 APPP05067 770 aa21.7■■□□□ 1.06
HMGN1-206ENST00000431390 PSMA5P28066 241 aa21.7■■□□□ 1.06
HMGN1-206ENST00000431390 DACT2Q5SW24 774 aa21.7■■□□□ 1.06
HMGN1-206ENST00000431390 NACAP1Q9BZK3 213 aa21.7■■□□□ 1.06
HMGN1-206ENST00000431390 COL4A5P29400 1685 aa21.7■■□□□ 1.06
HMGN1-206ENST00000431390 GSG1L2A8MUP6 293 aa21.7■■□□□ 1.06
HMGN1-206ENST00000431390 BAG3O95817 575 aa21.7■■□□□ 1.06
HMGN1-206ENST00000431390 PPP4CP60510 307 aa21.7■■□□□ 1.06
HMGN1-206ENST00000431390 DYNLL1P63167 89 aaKnown RBP21.7■■□□□ 1.06
HMGN1-206ENST00000431390 IMMTQ16891 758 aaKnown RBP21.7■■□□□ 1.06
HMGN1-206ENST00000431390 IFNL3Q8IZI9 196 aa21.7■■□□□ 1.06
HMGN1-206ENST00000431390 NOL10Q9BSC4 688 aaKnown RBP21.7■■□□□ 1.06
HMGN1-206ENST00000431390 PRDM10Q9NQV6 1147 aa21.7■■□□□ 1.06
HMGN1-206ENST00000431390 AATFQ9NY61 560 aaKnown RBP eCLIP21.7■■□□□ 1.06
HMGN1-206ENST00000431390 GAKO14976 1311 aa21.69■■□□□ 1.06
HMGN1-206ENST00000431390 YDJCA8MPS7 323 aa21.69■■□□□ 1.06
HMGN1-206ENST00000431390 FZD9O00144 591 aa21.69■■□□□ 1.06
HMGN1-206ENST00000431390 NEK4P51957 841 aa21.69■■□□□ 1.06
HMGN1-206ENST00000431390 DIXDC1Q155Q3 683 aa21.69■■□□□ 1.06
HMGN1-206ENST00000431390 MAP1SQ66K74 1059 aaPredicted RBP21.69■■□□□ 1.06
HMGN1-206ENST00000431390 HSCBQ8IWL3 235 aa21.69■■□□□ 1.06
HMGN1-206ENST00000431390 TBC1D2Q9BYX2 928 aa21.69■■□□□ 1.06
HMGN1-206ENST00000431390 CRNKL1Q9BZJ0 848 aaKnown RBP21.69■■□□□ 1.06
HMGN1-206ENST00000431390 EPB41L4AQ9HCS5 686 aaPredicted RBP21.69■■□□□ 1.06
HMGN1-206ENST00000431390 KCNQ5Q9NR82 932 aa21.69■■□□□ 1.06
HMGN1-206ENST00000431390 CTCFP49711 727 aaPredicted RBP21.68■■□□□ 1.06
HMGN1-206ENST00000431390 ADCK5Q3MIX3 580 aa21.68■■□□□ 1.06
HMGN1-206ENST00000431390 GIMAP6Q6P9H5 292 aa21.68■■□□□ 1.06
HMGN1-206ENST00000431390 NIM1KQ8IY84 436 aa21.68■■□□□ 1.06
HMGN1-206ENST00000431390 JAKMIP1Q96N16 626 aaKnown RBP21.68■■□□□ 1.06
HMGN1-206ENST00000431390 NAPBQ9H115 298 aa21.68■■□□□ 1.06
HMGN1-206ENST00000431390 ZSWIM6Q9HCJ5 1215 aa21.68■■□□□ 1.06
HMGN1-206ENST00000431390 GPR75-ASB3A0A0A6YYF3 556 aa21.67■■□□□ 1.06
HMGN1-206ENST00000431390 PRKAB2O43741 272 aa21.67■■□□□ 1.06
HMGN1-206ENST00000431390 PNMA8AQ86V59 439 aaPredicted RBP21.67■■□□□ 1.06
HMGN1-206ENST00000431390 MRIQ9BWK5 157 aa21.67■■□□□ 1.06
HMGN1-206ENST00000431390 TTF2Q9UNY4 1162 aaKnown RBP21.67■■□□□ 1.06
HMGN1-206ENST00000431390 MYO3BQ8WXR4 1341 aa21.66■■□□□ 1.06
HMGN1-206ENST00000431390 ZNF213O14771 459 aa21.66■■□□□ 1.06
HMGN1-206ENST00000431390 PLCG2P16885 1265 aa21.66■■□□□ 1.06
HMGN1-206ENST00000431390 CASTP20810 708 aaKnown RBP21.66■■□□□ 1.06
HMGN1-206ENST00000431390 GPC2Q8N158 579 aa21.66■■□□□ 1.06
HMGN1-206ENST00000431390 MXD3Q9BW11 206 aa21.66■■□□□ 1.06
HMGN1-206ENST00000431390 UPF3BQ9BZI7 483 aaKnown RBP21.66■■□□□ 1.06
HMGN1-206ENST00000431390 DAXXQ9UER7 740 aaPredicted RBP21.66■■□□□ 1.06
HMGN1-206ENST00000431390 ZNRF3Q9ULT6 936 aa21.66■■□□□ 1.06
HMGN1-206ENST00000431390 TAF6LQ9Y6J9 622 aa21.66■■□□□ 1.06
HMGN1-206ENST00000431390 CDK5RAP2Q96SN8 1893 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms