RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 MAP3K12Q12852 859 aa30.53■■■□□ 2.48
CPNE1-212ENST00000430570 MAGEB6Q8N7X4 407 aa30.53■■■□□ 2.48
CPNE1-212ENST00000430570 GPR75-ASB3A0A0A6YYF3 556 aa30.52■■■□□ 2.48
CPNE1-212ENST00000430570 BTDP43251 543 aa30.52■■■□□ 2.48
CPNE1-212ENST00000430570 APOBEC3FQ8IUX4 373 aaKnown RBP30.52■■■□□ 2.48
CPNE1-212ENST00000430570 CCDC136Q96JN2 1154 aa30.52■■■□□ 2.48
CPNE1-212ENST00000430570 MAST2Q6P0Q8 1798 aa30.52■■■□□ 2.48
CPNE1-212ENST00000430570 IGSF3O75054 1194 aa30.51■■■□□ 2.48
CPNE1-212ENST00000430570 CYP7A1P22680 504 aa30.51■■■□□ 2.48
CPNE1-212ENST00000430570 PRAMEF18Q5VWM3 479 aa30.51■■■□□ 2.48
CPNE1-212ENST00000430570 USP40Q9NVE5 1235 aa30.51■■■□□ 2.48
CPNE1-212ENST00000430570 TCP10L2B9ZVM9 353 aa30.5■■■□□ 2.47
CPNE1-212ENST00000430570 CENPQQ7L2Z9 268 aaPredicted RBP30.5■■■□□ 2.47
CPNE1-212ENST00000430570 CHGBP05060 677 aa30.49■■■□□ 2.47
CPNE1-212ENST00000430570 SLFNL1Q499Z3 407 aa30.49■■■□□ 2.47
CPNE1-212ENST00000430570 ERICH6BQ5W0A0 696 aa30.49■■■□□ 2.47
CPNE1-212ENST00000430570 DEFB129Q9H1M3 183 aa30.49■■■□□ 2.47
CPNE1-212ENST00000430570 PDE6AP16499 860 aa30.48■■■□□ 2.47
CPNE1-212ENST00000430570 SLC9C2Q5TAH2 1124 aa30.48■■■□□ 2.47
CPNE1-212ENST00000430570 CDCA5Q96FF9 252 aa30.48■■■□□ 2.47
CPNE1-212ENST00000430570 OSBPL3Q9H4L5 887 aa30.48■■■□□ 2.47
CPNE1-212ENST00000430570 RHBDL3P58872 404 aa30.47■■■□□ 2.47
CPNE1-212ENST00000430570 RASA3Q14644 834 aa30.47■■■□□ 2.47
CPNE1-212ENST00000430570 AATFQ9NY61 560 aaKnown RBP eCLIP30.47■■■□□ 2.47
CPNE1-212ENST00000430570 TCRBV5S4A2TA0A5A2 114 aa30.47■■■□□ 2.47
CPNE1-212ENST00000430570 NFIAQ12857 509 aa30.47■■■□□ 2.47
CPNE1-212ENST00000430570 CST9Q5W186 159 aa30.47■■■□□ 2.47
CPNE1-212ENST00000430570 KBTBD3Q8NAB2 608 aa30.47■■■□□ 2.47
CPNE1-212ENST00000430570 ADD2P35612 726 aa30.46■■■□□ 2.47
CPNE1-212ENST00000430570 DYNLL1P63167 89 aaKnown RBP30.46■■■□□ 2.47
CPNE1-212ENST00000430570 ZNF408Q9H9D4 720 aa30.46■■■□□ 2.47
CPNE1-212ENST00000430570 TMOD2Q9NZR1 351 aa30.46■■■□□ 2.47
CPNE1-212ENST00000430570 ZNF532Q9HCE3 1301 aa30.45■■■□□ 2.47
CPNE1-212ENST00000430570 CNTNAP1P78357 1384 aa30.45■■■□□ 2.47
CPNE1-212ENST00000430570 APLP1P51693 650 aa30.45■■■□□ 2.46
CPNE1-212ENST00000430570 PPP4CP60510 307 aa30.45■■■□□ 2.46
CPNE1-212ENST00000430570 MIGA1Q8NAN2 632 aa30.45■■■□□ 2.46
CPNE1-212ENST00000430570 PPP4R2Q9NY27 417 aa30.45■■■□□ 2.46
CPNE1-212ENST00000430570 CELF2O95319 508 aaKnown RBP30.44■■■□□ 2.46
CPNE1-212ENST00000430570 HSPA6P17066 643 aa30.44■■■□□ 2.46
CPNE1-212ENST00000430570 FKBP1CQ5VVH2 108 aa30.44■■■□□ 2.46
CPNE1-212ENST00000430570 SH3RF3Q8TEJ3 882 aaPredicted RBP30.44■■■□□ 2.46
CPNE1-212ENST00000430570 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.44■■■□□ 2.463e-7■■■■□ 26.3
CPNE1-212ENST00000430570 FAM198AQ9UFP1 575 aa30.44■■■□□ 2.46
CPNE1-212ENST00000430570 WDHD1O75717 1129 aaPredicted RBP30.43■■■□□ 2.46
CPNE1-212ENST00000430570 TNFAIP1Q13829 316 aa30.43■■■□□ 2.46
CPNE1-212ENST00000430570 SKAP1Q86WV1 359 aa30.43■■■□□ 2.46
CPNE1-212ENST00000430570 CDAN1Q8IWY9 1227 aa30.43■■■□□ 2.46
CPNE1-212ENST00000430570 TRPM7Q96QT4 1865 aa30.43■■■□□ 2.46
CPNE1-212ENST00000430570 TMEM39BQ9GZU3 492 aa30.43■■■□□ 2.46
CPNE1-212ENST00000430570 BAG3O95817 575 aa30.42■■■□□ 2.46
CPNE1-212ENST00000430570 TCP10Q12799 353 aa30.42■■■□□ 2.46
CPNE1-212ENST00000430570 TMED8Q6PL24 325 aaPredicted RBP30.42■■■□□ 2.46
CPNE1-212ENST00000430570 ZFPM1Q8IX07 1006 aa30.42■■■□□ 2.46
CPNE1-212ENST00000430570 TEPSINQ96N21 525 aa30.42■■■□□ 2.46
CPNE1-212ENST00000430570 NOL10Q9BSC4 688 aaKnown RBP30.42■■■□□ 2.46
CPNE1-212ENST00000430570 IDI2Q9BXS1 227 aa30.42■■■□□ 2.46
CPNE1-212ENST00000430570 PPP2R3BQ9Y5P8 575 aa30.42■■■□□ 2.46
CPNE1-212ENST00000430570 MYH7P12883 1935 aa30.41■■■□□ 2.46
CPNE1-212ENST00000430570 TNNI2P48788 182 aa30.41■■■□□ 2.46
CPNE1-212ENST00000430570 HTRA3P83110 453 aa30.41■■■□□ 2.46
CPNE1-212ENST00000430570 NBPF12Q5TAG4 269 aaPredicted RBP30.41■■■□□ 2.46
CPNE1-212ENST00000430570 FAM83AQ86UY5 434 aa30.41■■■□□ 2.46
CPNE1-212ENST00000430570 DDX4Q9NQI0 724 aaKnown RBP30.41■■■□□ 2.46
CPNE1-212ENST00000430570 RFX7Q2KHR2 1363 aa30.4■■■□□ 2.46
CPNE1-212ENST00000430570 RGS3P49796 1198 aa30.4■■■□□ 2.46
CPNE1-212ENST00000430570 UBE3CQ15386 1083 aa30.4■■■□□ 2.46
CPNE1-212ENST00000430570 TMEM88BA6NKF7 163 aa30.39■■■□□ 2.46
CPNE1-212ENST00000430570 ZSCAN25Q6NSZ9 544 aa30.39■■■□□ 2.46
CPNE1-212ENST00000430570 TEX11Q8IYF3 940 aa30.39■■■□□ 2.46
CPNE1-212ENST00000430570 FAM151AQ8WW52 585 aa30.39■■■□□ 2.46
CPNE1-212ENST00000430570 EVI5LQ96CN4 794 aa30.39■■■□□ 2.46
CPNE1-212ENST00000430570 RIOK1Q9BRS2 568 aaKnown RBP30.39■■■□□ 2.46
CPNE1-212ENST00000430570 FSD1Q9BTV5 496 aa30.39■■■□□ 2.46
CPNE1-212ENST00000430570 PICALMQ13492 652 aa30.38■■■□□ 2.45
CPNE1-212ENST00000430570 MAGEB6P1A0A0J9YX57 407 aa30.37■■■□□ 2.45
CPNE1-212ENST00000430570 RNF113AO15541 343 aaKnown RBP30.37■■■□□ 2.45
CPNE1-212ENST00000430570 PLCG2P16885 1265 aa30.37■■■□□ 2.45
CPNE1-212ENST00000430570 TRIM6-TRIM34B2RNG4 842 aa30.36■■■□□ 2.45
CPNE1-212ENST00000430570 TGFBRAP1Q8WUH2 860 aa30.36■■■□□ 2.45
CPNE1-212ENST00000430570 PUS7LQ9H0K6 701 aaKnown RBP30.36■■■□□ 2.45
CPNE1-212ENST00000430570 FZD1Q9UP38 647 aa30.36■■■□□ 2.45
CPNE1-212ENST00000430570 SSC5DA1L4H1 1573 aa30.36■■■□□ 2.45
CPNE1-212ENST00000430570 ENTPD3O75355 529 aa30.35■■■□□ 2.45
CPNE1-212ENST00000430570 MOB2Q70IA6 237 aa30.35■■■□□ 2.45
CPNE1-212ENST00000430570 SH3BP5LQ7L8J4 393 aa30.35■■■□□ 2.45
CPNE1-212ENST00000430570 LCORLQ8N3X6 602 aa30.35■■■□□ 2.45
CPNE1-212ENST00000430570 RILPL2Q969X0 211 aa30.35■■■□□ 2.45
CPNE1-212ENST00000430570 GBA2Q9HCG7 927 aaPredicted RBP30.35■■■□□ 2.45
CPNE1-212ENST00000430570 CREBZFQ9NS37 354 aa30.35■■■□□ 2.45
CPNE1-212ENST00000430570 GSPT1P15170 499 aaKnown RBP30.34■■■□□ 2.45
CPNE1-212ENST00000430570 PRKG1Q13976 671 aa30.34■■■□□ 2.45
CPNE1-212ENST00000430570 TTC22Q5TAA0 569 aa30.34■■■□□ 2.45
CPNE1-212ENST00000430570 OSBP2Q969R2 916 aa30.34■■■□□ 2.45
CPNE1-212ENST00000430570 ARMT1Q9H993 441 aa30.34■■■□□ 2.45
CPNE1-212ENST00000430570 NPM3O75607 178 aaKnown RBP30.33■■■□□ 2.45
CPNE1-212ENST00000430570 ZFYP08048 801 aaPredicted RBP30.33■■■□□ 2.45
CPNE1-212ENST00000430570 SUPT20HL1Q3ZLR7 823 aa30.33■■■□□ 2.45
CPNE1-212ENST00000430570 CDK5RAP2Q96SN8 1893 aa30.33■■■□□ 2.45
CPNE1-212ENST00000430570 MBD4O95243 580 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms