RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 PPP2R3AQ06190 1150 aa5.9□□□□□ -1.47
RIF1-203ENST00000428287 LRRC31Q6UY01 552 aa5.9□□□□□ -1.47
RIF1-203ENST00000428287 DHX32Q7L7V1 743 aaKnown RBP5.9□□□□□ -1.47
RIF1-203ENST00000428287 NME9Q86XW9 330 aa5.9□□□□□ -1.47
RIF1-203ENST00000428287 CCAR1Q8IX12 1150 aaKnown RBP5.9□□□□□ -1.47
RIF1-203ENST00000428287 PDE11AQ9HCR9 933 aa5.9□□□□□ -1.47
RIF1-203ENST00000428287 MST1RQ04912 1400 aa5.9□□□□□ -1.47
RIF1-203ENST00000428287 A0A0D9SFI3 127 aa5.9□□□□□ -1.47
RIF1-203ENST00000428287 GOLIM4O00461 696 aa5.9□□□□□ -1.47
RIF1-203ENST00000428287 SCRN1Q12765 414 aa5.9□□□□□ -1.47
RIF1-203ENST00000428287 ERC1Q8IUD2 1116 aa5.9□□□□□ -1.47
RIF1-203ENST00000428287 RPGRIP1Q96KN7 1286 aa5.9□□□□□ -1.47
RIF1-203ENST00000428287 ADGRG1Q9Y653 693 aa5.9□□□□□ -1.47
RIF1-203ENST00000428287 ANKRD33BA6NCL7 494 aa5.9□□□□□ -1.47
RIF1-203ENST00000428287 PRPF40BQ6NWY9 871 aaKnown RBP5.9□□□□□ -1.47
RIF1-203ENST00000428287 KAT2BQ92831 832 aa5.9□□□□□ -1.47
RIF1-203ENST00000428287 FAM227BQ96M60 508 aa5.9□□□□□ -1.47
RIF1-203ENST00000428287 WDR17Q8IZU2 1322 aa5.9□□□□□ -1.47
RIF1-203ENST00000428287 RTN2O75298 545 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 SASH1O94885 1247 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 GNG11P61952 73 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 NR1I3Q14994 352 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 C11orf91Q3C1V1 193 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 PAXIP1Q6ZW49 1069 aaPredicted RBP5.89□□□□□ -1.47
RIF1-203ENST00000428287 FSIP1Q8NA03 581 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 ANKRD20A12PQ8NF67 263 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 MED15Q96RN5 788 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 PKD1L3Q7Z443 1732 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 SBF2Q86WG5 1849 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 PBX1P40424 430 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 NLRP12P59046 1061 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 BRAPQ7Z569 592 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 DHX58Q96C10 678 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 NUTM1Q86Y26 1132 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 ENOX1Q8TC92 643 aaKnown RBP5.89□□□□□ -1.47
RIF1-203ENST00000428287 MYLKQ15746 1914 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 CHUKO15111 745 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 SARSP49591 514 aaKnown RBP5.89□□□□□ -1.47
RIF1-203ENST00000428287 SATB1Q01826 763 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 SLC39A14Q15043 492 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 ZNF572Q7Z3I7 529 aaPredicted RBP5.89□□□□□ -1.47
RIF1-203ENST00000428287 TMC6Q7Z403 805 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 CEP112Q8N8E3 955 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 BAG1Q99933 345 aaPredicted RBP5.89□□□□□ -1.47
RIF1-203ENST00000428287 ARAP2Q8WZ64 1704 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 TARSL2A2RTX5 802 aaKnown RBP5.89□□□□□ -1.47
RIF1-203ENST00000428287 IL17REQ8NFR9 667 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 PNKPQ96T60 521 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 TSPYL4Q9UJ04 414 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 KIF1AQ12756 1690 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 FSBPO95073 299 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 PIP4K2BP78356 416 aa5.89□□□□□ -1.47
RIF1-203ENST00000428287 NUTM2DQ5VT03 806 aaPredicted RBP5.89□□□□□ -1.47
RIF1-203ENST00000428287 NUTM2AQ8IVF1 878 aaPredicted RBP5.89□□□□□ -1.47
RIF1-203ENST00000428287 PPP1R12AO14974 1030 aaPredicted RBP5.88□□□□□ -1.47
RIF1-203ENST00000428287 ATP5JP18859 108 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 CNNM3Q8NE01 707 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 SYTL4Q96C24 671 aaPredicted RBP5.88□□□□□ -1.47
RIF1-203ENST00000428287 ZNF396Q96N95 335 aaPredicted RBP5.88□□□□□ -1.47
RIF1-203ENST00000428287 NEK1Q96PY6 1258 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 NAA15Q9BXJ9 866 aaKnown RBP5.88□□□□□ -1.47
RIF1-203ENST00000428287 FAN1Q9Y2M0 1017 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 WDHD1O75717 1129 aaPredicted RBP5.88□□□□□ -1.47
RIF1-203ENST00000428287 SYF2O95926 243 aaKnown RBP5.88□□□□□ -1.47
RIF1-203ENST00000428287 TAF7Q15545 349 aaPredicted RBP5.88□□□□□ -1.47
RIF1-203ENST00000428287 FOXR1Q6PIV2 292 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 IQCKQ8N0W5 287 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 MAGEC3Q8TD91 643 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 COPRSQ9NQ92 184 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 TANC1Q9C0D5 1861 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 MGAMO43451 1857 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 ALS2Q96Q42 1657 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 AGPSO00116 658 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 ERLIN1O75477 346 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 PRR29P0C7W0 189 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 VSNL1P62760 191 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 RRS1Q15050 365 aaKnown RBP5.88□□□□□ -1.47
RIF1-203ENST00000428287 MYSM1Q5VVJ2 828 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 TRIML1Q8N9V2 468 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 SH2B2O14492 632 aaPredicted RBP5.88□□□□□ -1.47
RIF1-203ENST00000428287 EPB41P11171 864 aaKnown RBP5.88□□□□□ -1.47
RIF1-203ENST00000428287 MAP2K2P36507 400 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 ME1P48163 572 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 UBE3BQ7Z3V4 1068 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 GPATCH3Q96I76 525 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 EPC1Q9H2F5 836 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 SUGCTQ9HAC7 445 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 ZNF609O15014 1411 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 A0A1B0GTH6 734 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 SEMA3EO15041 775 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 SEC31AO94979 1220 aaKnown RBP5.88□□□□□ -1.47
RIF1-203ENST00000428287 E2F4Q16254 413 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 GBP6Q6ZN66 633 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 CTCFLQ8NI51 663 aaPredicted RBP5.88□□□□□ -1.47
RIF1-203ENST00000428287 RUBCNQ92622 972 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 NUDT16Q96DE0 195 aaKnown RBP5.88□□□□□ -1.47
RIF1-203ENST00000428287 IRX2Q9BZI1 471 aaPredicted RBP5.88□□□□□ -1.47
RIF1-203ENST00000428287 A0A087WWV3 80 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 A0A1B0GVL5 298 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 EBAG9O00559 213 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms