RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 STOX1Q6ZVD7 989 aa14.39□□□□□ -0.11
RFC4-206ENST00000427785 IPO9Q96P70 1041 aaKnown RBP14.39□□□□□ -0.11
RFC4-206ENST00000427785 NOL10Q9BSC4 688 aaKnown RBP14.39□□□□□ -0.11
RFC4-206ENST00000427785 SYT17Q9BSW7 474 aa14.39□□□□□ -0.11
RFC4-206ENST00000427785 NAPBQ9H115 298 aa14.39□□□□□ -0.11
RFC4-206ENST00000427785 DAGLAQ9Y4D2 1042 aa14.39□□□□□ -0.11
RFC4-206ENST00000427785 ZMYM6O95789 1325 aa14.39□□□□□ -0.11
RFC4-206ENST00000427785 PSMD14O00487 310 aa14.38□□□□□ -0.11
RFC4-206ENST00000427785 FGAP02671 866 aa14.38□□□□□ -0.11
RFC4-206ENST00000427785 LDHCP07864 332 aa14.38□□□□□ -0.11
RFC4-206ENST00000427785 CPA1P15085 419 aa14.38□□□□□ -0.11
RFC4-206ENST00000427785 CASTP20810 708 aaKnown RBP14.38□□□□□ -0.11
RFC4-206ENST00000427785 SLC4A3P48751 1232 aa14.38□□□□□ -0.11
RFC4-206ENST00000427785 FKBP1AP62942 108 aaKnown RBP14.38□□□□□ -0.11
RFC4-206ENST00000427785 COL9A3Q14050 684 aaPredicted RBP14.38□□□□□ -0.11
RFC4-206ENST00000427785 TMED8Q6PL24 325 aaPredicted RBP14.38□□□□□ -0.11
RFC4-206ENST00000427785 KIAA0825Q8IV33 1275 aa14.38□□□□□ -0.11
RFC4-206ENST00000427785 HSCBQ8IWL3 235 aa14.38□□□□□ -0.11
RFC4-206ENST00000427785 IFNL3Q8IZI9 196 aa14.38□□□□□ -0.11
RFC4-206ENST00000427785 SH3RF3Q8TEJ3 882 aaPredicted RBP14.38□□□□□ -0.11
RFC4-206ENST00000427785 TBC1D2Q9BYX2 928 aa14.38□□□□□ -0.11
RFC4-206ENST00000427785 CRNKL1Q9BZJ0 848 aaKnown RBP14.38□□□□□ -0.11
RFC4-206ENST00000427785 SUGT1Q9Y2Z0 365 aa14.38□□□□□ -0.11
RFC4-206ENST00000427785 PATL2C9JE40 543 aaKnown RBP14.37□□□□□ -0.11
RFC4-206ENST00000427785 IGSF3O75054 1194 aa14.37□□□□□ -0.11
RFC4-206ENST00000427785 IMMTQ16891 758 aaKnown RBP14.37□□□□□ -0.11
RFC4-206ENST00000427785 TBC1D10CQ8IV04 446 aa14.37□□□□□ -0.11
RFC4-206ENST00000427785 SLF2Q8IX21 1173 aa14.37□□□□□ -0.11
RFC4-206ENST00000427785 NBPF3Q9H094 633 aa14.37□□□□□ -0.11
RFC4-206ENST00000427785 VPS33BQ9H267 617 aa14.37□□□□□ -0.11
RFC4-206ENST00000427785 CTNNA3Q9UI47 895 aa14.37□□□□□ -0.11
RFC4-206ENST00000427785 ZNRF3Q9ULT6 936 aa14.37□□□□□ -0.11
RFC4-206ENST00000427785 NEK4P51957 841 aa14.36□□□□□ -0.11
RFC4-206ENST00000427785 BECN1Q14457 450 aa14.36□□□□□ -0.11
RFC4-206ENST00000427785 ALX1Q15699 326 aa14.36□□□□□ -0.11
RFC4-206ENST00000427785 NOL8Q76FK4 1167 aaKnown RBP14.36□□□□□ -0.11
RFC4-206ENST00000427785 NACAP1Q9BZK3 213 aa14.36□□□□□ -0.11
RFC4-206ENST00000427785 GPR75-ASB3A0A0A6YYF3 556 aa14.35□□□□□ -0.11
RFC4-206ENST00000427785 ST18O60284 1047 aa14.35□□□□□ -0.11
RFC4-206ENST00000427785 BAG3O95817 575 aa14.35□□□□□ -0.11
RFC4-206ENST00000427785 YBX3P16989 372 aaKnown RBP eCLIP14.35□□□□□ -0.117e-7■□□□□ 10.4
RFC4-206ENST00000427785 CRKP46108 304 aa14.35□□□□□ -0.11
RFC4-206ENST00000427785 KRT32Q14532 448 aa14.35□□□□□ -0.11
RFC4-206ENST00000427785 RSBN1LQ6PCB5 846 aaPredicted RBP14.35□□□□□ -0.11
RFC4-206ENST00000427785 ARHGAP27Q6ZUM4 889 aa14.35□□□□□ -0.11
RFC4-206ENST00000427785 TEX11Q8IYF3 940 aa14.35□□□□□ -0.11
RFC4-206ENST00000427785 JDP2Q8WYK2 163 aa14.35□□□□□ -0.11
RFC4-206ENST00000427785 SNX21Q969T3 373 aa14.35□□□□□ -0.11
RFC4-206ENST00000427785 TEKT1Q969V4 418 aa14.35□□□□□ -0.11
RFC4-206ENST00000427785 TCEANC2Q96MN5 208 aa14.35□□□□□ -0.11
RFC4-206ENST00000427785 PCDHAC2Q9Y5I4 1007 aa14.35□□□□□ -0.11
RFC4-206ENST00000427785 NEDD4P46934 1319 aa14.35□□□□□ -0.11
RFC4-206ENST00000427785 CYP2D7A0A087X1C5 515 aa14.34□□□□□ -0.11
RFC4-206ENST00000427785 E7EWF7 191 aa14.34□□□□□ -0.11
RFC4-206ENST00000427785 ZNF213O14771 459 aa14.34□□□□□ -0.11
RFC4-206ENST00000427785 PSMA5P28066 241 aa14.34□□□□□ -0.11
RFC4-206ENST00000427785 USP5P45974 858 aa14.34□□□□□ -0.11
RFC4-206ENST00000427785 RHBDL3P58872 404 aa14.34□□□□□ -0.11
RFC4-206ENST00000427785 PPP4CP60510 307 aa14.34□□□□□ -0.11
RFC4-206ENST00000427785 CTDSPL2Q05D32 466 aa14.34□□□□□ -0.11
RFC4-206ENST00000427785 CXCL9Q07325 125 aa14.34□□□□□ -0.11
RFC4-206ENST00000427785 SLC4A8Q2Y0W8 1093 aa14.34□□□□□ -0.11
RFC4-206ENST00000427785 TSGA10IPQ3SY00 556 aa14.34□□□□□ -0.11
RFC4-206ENST00000427785 CIAPIN1Q6FI81 312 aa14.34□□□□□ -0.11
RFC4-206ENST00000427785 BLOC1S2Q6QNY1 142 aa14.34□□□□□ -0.11
RFC4-206ENST00000427785 DCP1AQ9NPI6 582 aaPredicted RBP14.34□□□□□ -0.11
RFC4-206ENST00000427785 ZBTB12Q9Y330 459 aaPredicted RBP14.34□□□□□ -0.11
RFC4-206ENST00000427785 CYP46A1Q9Y6A2 500 aa14.34□□□□□ -0.11
RFC4-206ENST00000427785 MYO3BQ8WXR4 1341 aa14.34□□□□□ -0.11
RFC4-206ENST00000427785 ZNF541Q9H0D2 1346 aa14.34□□□□□ -0.11
RFC4-206ENST00000427785 SMIM22K7EJ46 135 aa14.33□□□□□ -0.12
RFC4-206ENST00000427785 SOCS7O14512 581 aa14.33□□□□□ -0.12
RFC4-206ENST00000427785 VIL1P09327 827 aaKnown RBP14.33□□□□□ -0.12
RFC4-206ENST00000427785 CYP2D6P10635 497 aa14.33□□□□□ -0.12
RFC4-206ENST00000427785 PLCG2P16885 1265 aa14.33□□□□□ -0.12
RFC4-206ENST00000427785 RPS6KB1P23443 525 aa14.33□□□□□ -0.12
RFC4-206ENST00000427785 RBM5P52756 815 aaKnown RBP eCLIP14.33□□□□□ -0.12
RFC4-206ENST00000427785 EVX2Q03828 476 aa14.33□□□□□ -0.12
RFC4-206ENST00000427785 PPARAQ07869 468 aa14.33□□□□□ -0.12
RFC4-206ENST00000427785 MAPKAPK5Q8IW41 473 aa14.33□□□□□ -0.12
RFC4-206ENST00000427785 STK11IPQ8N1F8 1099 aa14.33□□□□□ -0.12
RFC4-206ENST00000427785 TGFBRAP1Q8WUH2 860 aa14.33□□□□□ -0.12
RFC4-206ENST00000427785 FAM163AQ96GL9 167 aaPredicted RBP14.33□□□□□ -0.12
RFC4-206ENST00000427785 TTC14Q96N46 770 aa14.33□□□□□ -0.12
RFC4-206ENST00000427785 NEK1Q96PY6 1258 aa14.33□□□□□ -0.12
RFC4-206ENST00000427785 TM6SF1Q9BZW5 370 aa14.33□□□□□ -0.12
RFC4-206ENST00000427785 ZSWIM6Q9HCJ5 1215 aa14.33□□□□□ -0.12
RFC4-206ENST00000427785 TACC3Q9Y6A5 838 aa14.33□□□□□ -0.12
RFC4-206ENST00000427785 MINDY4BA8MYZ0 360 aa14.32□□□□□ -0.12
RFC4-206ENST00000427785 K7ELQ4 463 aaPredicted RBP14.32□□□□□ -0.12
RFC4-206ENST00000427785 AK2P54819 239 aa14.32□□□□□ -0.12
RFC4-206ENST00000427785 HHIPL2Q6UWX4 724 aa14.32□□□□□ -0.12
RFC4-206ENST00000427785 RUFY3Q7L099 469 aa14.32□□□□□ -0.12
RFC4-206ENST00000427785 CERS3Q8IU89 383 aa14.32□□□□□ -0.12
RFC4-206ENST00000427785 GMLQ99445 158 aa14.32□□□□□ -0.12
RFC4-206ENST00000427785 PDRG1Q9NUG6 133 aa14.32□□□□□ -0.12
RFC4-206ENST00000427785 DAXXQ9UER7 740 aaPredicted RBP14.32□□□□□ -0.12
RFC4-206ENST00000427785 SAP30BPQ9UHR5 308 aaKnown RBP14.32□□□□□ -0.12
RFC4-206ENST00000427785 FLT1P17948 1338 aa14.32□□□□□ -0.12
RFC4-206ENST00000427785 USP17L12C9JPN9 530 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms