RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 FZD1Q9UP38 647 aa27.34■■□□□ 1.97
PTCHD3P2-201ENST00000424937 GAKO14976 1311 aa27.34■■□□□ 1.97
PTCHD3P2-201ENST00000424937 ANGEL1Q9UNK9 670 aaKnown RBP27.33■■□□□ 1.97
PTCHD3P2-201ENST00000424937 CDC42EP5Q6NZY7 148 aa27.32■■□□□ 1.96
PTCHD3P2-201ENST00000424937 CDAN1Q8IWY9 1227 aa27.32■■□□□ 1.96
PTCHD3P2-201ENST00000424937 LRP2BPQ9P2M1 347 aa27.32■■□□□ 1.96
PTCHD3P2-201ENST00000424937 MROH7-TTC4A0A0A0MT08 1334 aa27.32■■□□□ 1.96
PTCHD3P2-201ENST00000424937 IFIT2P09913 472 aaKnown RBP27.31■■□□□ 1.96
PTCHD3P2-201ENST00000424937 ZAP70P43403 619 aa27.31■■□□□ 1.96
PTCHD3P2-201ENST00000424937 FKBP1CQ5VVH2 108 aa27.31■■□□□ 1.96
PTCHD3P2-201ENST00000424937 CCDC102AQ96A19 550 aa27.31■■□□□ 1.96
PTCHD3P2-201ENST00000424937 TEPSINQ96N21 525 aa27.31■■□□□ 1.96
PTCHD3P2-201ENST00000424937 FAM155AB1AL88 458 aaPredicted RBP27.3■■□□□ 1.96
PTCHD3P2-201ENST00000424937 PPP1R12BO60237 982 aaPredicted RBP27.3■■□□□ 1.96
PTCHD3P2-201ENST00000424937 CYP2E1P05181 493 aaPredicted RBP27.3■■□□□ 1.96
PTCHD3P2-201ENST00000424937 SLC10A3P09131 477 aa27.3■■□□□ 1.96
PTCHD3P2-201ENST00000424937 MAP2K2P36507 400 aa27.3■■□□□ 1.96
PTCHD3P2-201ENST00000424937 NOGQ13253 232 aa27.3■■□□□ 1.96
PTCHD3P2-201ENST00000424937 RASAL3Q86YV0 1011 aa27.3■■□□□ 1.96
PTCHD3P2-201ENST00000424937 ZNF384Q8TF68 577 aa27.3■■□□□ 1.96
PTCHD3P2-201ENST00000424937 NSUN4Q96CB9 384 aaKnown RBP27.3■■□□□ 1.96
PTCHD3P2-201ENST00000424937 USP40Q9NVE5 1235 aa27.3■■□□□ 1.96
PTCHD3P2-201ENST00000424937 PCDHB15Q9Y5E8 787 aa27.3■■□□□ 1.96
PTCHD3P2-201ENST00000424937 BTDP43251 543 aa27.29■■□□□ 1.96
PTCHD3P2-201ENST00000424937 GSTO1P78417 241 aa27.29■■□□□ 1.96
PTCHD3P2-201ENST00000424937 MAP2K1Q02750 393 aaPredicted RBP27.29■■□□□ 1.96
PTCHD3P2-201ENST00000424937 FAM83AQ86UY5 434 aa27.29■■□□□ 1.96
PTCHD3P2-201ENST00000424937 LRRCC1Q9C099 1032 aa27.29■■□□□ 1.96
PTCHD3P2-201ENST00000424937 CDK5RAP2Q96SN8 1893 aa27.29■■□□□ 1.96
PTCHD3P2-201ENST00000424937 RPAP1Q9BWH6 1393 aaPredicted RBP27.28■■□□□ 1.96
PTCHD3P2-201ENST00000424937 AIDAQ96BJ3 306 aa27.28■■□□□ 1.96
PTCHD3P2-201ENST00000424937 FAM163AQ96GL9 167 aaPredicted RBP27.28■■□□□ 1.96
PTCHD3P2-201ENST00000424937 WBP1LQ9NX94 342 aa27.28■■□□□ 1.96
PTCHD3P2-201ENST00000424937 NDUFB9Q9Y6M9 179 aa27.28■■□□□ 1.96
PTCHD3P2-201ENST00000424937 NFIAQ12857 509 aa27.27■■□□□ 1.96
PTCHD3P2-201ENST00000424937 ZIC5Q96T25 663 aa27.27■■□□□ 1.96
PTCHD3P2-201ENST00000424937 PIH1D3Q9NQM4 214 aaKnown RBP27.27■■□□□ 1.96
PTCHD3P2-201ENST00000424937 SMARCA5O60264 1052 aaPredicted RBP27.26■■□□□ 1.95
PTCHD3P2-201ENST00000424937 LDHCP07864 332 aa27.26■■□□□ 1.95
PTCHD3P2-201ENST00000424937 TCP10Q12799 353 aa27.26■■□□□ 1.95
PTCHD3P2-201ENST00000424937 MAP3K11Q16584 847 aa27.26■■□□□ 1.95
PTCHD3P2-201ENST00000424937 DCTPP1Q9H773 170 aa27.26■■□□□ 1.95
PTCHD3P2-201ENST00000424937 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.26■■□□□ 1.95
PTCHD3P2-201ENST00000424937 FOCADQ5VW36 1801 aa27.25■■□□□ 1.95
PTCHD3P2-201ENST00000424937 RFX7Q2KHR2 1363 aa27.25■■□□□ 1.95
PTCHD3P2-201ENST00000424937 IREB2P48200 963 aaKnown RBP27.25■■□□□ 1.95
PTCHD3P2-201ENST00000424937 LDLRAD1Q5T700 205 aa27.25■■□□□ 1.95
PTCHD3P2-201ENST00000424937 FAM151AQ8WW52 585 aa27.25■■□□□ 1.95
PTCHD3P2-201ENST00000424937 MYH7P12883 1935 aa27.24■■□□□ 1.95
PTCHD3P2-201ENST00000424937 GPR75-ASB3A0A0A6YYF3 556 aa27.24■■□□□ 1.95
PTCHD3P2-201ENST00000424937 FOXN1O15353 648 aa27.24■■□□□ 1.95
PTCHD3P2-201ENST00000424937 NAA16Q6N069 864 aaPredicted RBP27.24■■□□□ 1.95
PTCHD3P2-201ENST00000424937 FAM198AQ9UFP1 575 aa27.24■■□□□ 1.95
PTCHD3P2-201ENST00000424937 LAMB1P07942 1786 aa27.23■■□□□ 1.95
PTCHD3P2-201ENST00000424937 USP2O75604 605 aaPredicted RBP27.23■■□□□ 1.95
PTCHD3P2-201ENST00000424937 BEGAINQ9BUH8 593 aa27.23■■□□□ 1.95
PTCHD3P2-201ENST00000424937 SUPT16HQ9Y5B9 1047 aaKnown RBP27.23■■□□□ 1.95
PTCHD3P2-201ENST00000424937 IDH1O75874 414 aaKnown RBP27.22■■□□□ 1.95
PTCHD3P2-201ENST00000424937 RGS3P49796 1198 aa27.22■■□□□ 1.95
PTCHD3P2-201ENST00000424937 KIF23Q02241 960 aaPredicted RBP27.22■■□□□ 1.95
PTCHD3P2-201ENST00000424937 CLMNQ96JQ2 1002 aa27.22■■□□□ 1.95
PTCHD3P2-201ENST00000424937 NOL10Q9BSC4 688 aaKnown RBP27.22■■□□□ 1.95
PTCHD3P2-201ENST00000424937 ANTXR1Q9H6X2 564 aa27.22■■□□□ 1.95
PTCHD3P2-201ENST00000424937 MKRN3Q13064 507 aaKnown RBP27.21■■□□□ 1.95
PTCHD3P2-201ENST00000424937 HOOK2Q96ED9 719 aa27.21■■□□□ 1.95
PTCHD3P2-201ENST00000424937 IDI2Q9BXS1 227 aa27.21■■□□□ 1.95
PTCHD3P2-201ENST00000424937 WDHD1O75717 1129 aaPredicted RBP27.2■■□□□ 1.94
PTCHD3P2-201ENST00000424937 RHBDL3P58872 404 aa27.2■■□□□ 1.94
PTCHD3P2-201ENST00000424937 PICALMQ13492 652 aa27.2■■□□□ 1.94
PTCHD3P2-201ENST00000424937 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.2■■□□□ 1.94
PTCHD3P2-201ENST00000424937 DNAJC2Q99543 621 aaKnown RBP27.2■■□□□ 1.94
PTCHD3P2-201ENST00000424937 ZFPM1Q8IX07 1006 aa27.19■■□□□ 1.94
PTCHD3P2-201ENST00000424937 ANKRD13AQ8IZ07 590 aa27.19■■□□□ 1.94
PTCHD3P2-201ENST00000424937 SLC10A4Q96EP9 437 aa27.19■■□□□ 1.94
PTCHD3P2-201ENST00000424937 DDX4Q9NQI0 724 aaKnown RBP27.19■■□□□ 1.94
PTCHD3P2-201ENST00000424937 UNCXA6NJT0 531 aa27.18■■□□□ 1.94
PTCHD3P2-201ENST00000424937 ENTPD3O75355 529 aa27.18■■□□□ 1.94
PTCHD3P2-201ENST00000424937 DCAF15Q66K64 600 aa27.18■■□□□ 1.94
PTCHD3P2-201ENST00000424937 ADGRA1Q86SQ6 560 aa27.18■■□□□ 1.94
PTCHD3P2-201ENST00000424937 AATFQ9NY61 560 aaKnown RBP eCLIP27.18■■□□□ 1.94
PTCHD3P2-201ENST00000424937 GOLIM4O00461 696 aa27.17■■□□□ 1.94
PTCHD3P2-201ENST00000424937 IGSF3O75054 1194 aa27.17■■□□□ 1.94
PTCHD3P2-201ENST00000424937 CTCFP49711 727 aaPredicted RBP27.17■■□□□ 1.94
PTCHD3P2-201ENST00000424937 MAP3K12Q12852 859 aa27.17■■□□□ 1.94
PTCHD3P2-201ENST00000424937 TTF1Q15361 905 aaPredicted RBP27.17■■□□□ 1.94
PTCHD3P2-201ENST00000424937 ZSCAN29Q8IWY8 852 aaPredicted RBP27.17■■□□□ 1.94
PTCHD3P2-201ENST00000424937 TEX11Q8IYF3 940 aa27.17■■□□□ 1.94
PTCHD3P2-201ENST00000424937 BOLA2Q9H3K6 86 aa27.17■■□□□ 1.94
PTCHD3P2-201ENST00000424937 BAG3O95817 575 aa27.16■■□□□ 1.94
PTCHD3P2-201ENST00000424937 MAP4K4O95819 1239 aaPredicted RBP27.16■■□□□ 1.94
PTCHD3P2-201ENST00000424937 ATP5JP18859 108 aa27.16■■□□□ 1.94
PTCHD3P2-201ENST00000424937 CYP7A1P22680 504 aa27.16■■□□□ 1.94
PTCHD3P2-201ENST00000424937 AAMPQ13685 434 aa27.16■■□□□ 1.94
PTCHD3P2-201ENST00000424937 SPRYD7Q5W111 196 aa27.16■■□□□ 1.94
PTCHD3P2-201ENST00000424937 MIGA2Q7L4E1 593 aa27.16■■□□□ 1.94
PTCHD3P2-201ENST00000424937 MAGEB6Q8N7X4 407 aa27.16■■□□□ 1.94
PTCHD3P2-201ENST00000424937 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.16■■□□□ 1.94
PTCHD3P2-201ENST00000424937 EXOC6Q8TAG9 804 aa27.16■■□□□ 1.94
PTCHD3P2-201ENST00000424937 SH3RF3Q8TEJ3 882 aaPredicted RBP27.16■■□□□ 1.94
PTCHD3P2-201ENST00000424937 MAP3K9P80192 1104 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms