RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 WRNIP1Q96S55 665 aa19.27■□□□□ 0.68
ACTB-202ENST00000414620 PTPN18Q99952 460 aa19.27■□□□□ 0.68
ACTB-202ENST00000414620 RPAP1Q9BWH6 1393 aaPredicted RBP19.27■□□□□ 0.68
ACTB-202ENST00000414620 ZSWIM8A7E2V4 1837 aa19.26■□□□□ 0.67
ACTB-202ENST00000414620 PNMA6EA0A0J9YXQ4 647 aa19.26■□□□□ 0.67
ACTB-202ENST00000414620 SEMA3EO15041 775 aa19.26■□□□□ 0.67
ACTB-202ENST00000414620 GNAI2P04899 355 aa19.26■□□□□ 0.67
ACTB-202ENST00000414620 CRHR2Q13324 411 aa19.26■□□□□ 0.67
ACTB-202ENST00000414620 MTX1Q13505 466 aa19.26■□□□□ 0.67
ACTB-202ENST00000414620 RASGRF1Q13972 1273 aa19.26■□□□□ 0.67
ACTB-202ENST00000414620 ZKSCAN2Q63HK3 967 aa19.26■□□□□ 0.67
ACTB-202ENST00000414620 MIGA2Q7L4E1 593 aa19.26■□□□□ 0.67
ACTB-202ENST00000414620 XAGE2Q96GT9 111 aa19.26■□□□□ 0.67
ACTB-202ENST00000414620 SNCAIPQ9Y6H5 919 aa19.26■□□□□ 0.67
ACTB-202ENST00000414620 SALL1Q9NSC2 1324 aa19.25■□□□□ 0.67
ACTB-202ENST00000414620 MYO5AQ9Y4I1 1855 aaKnown RBP19.25■□□□□ 0.67
ACTB-202ENST00000414620 NFIAQ12857 509 aa19.25■□□□□ 0.67
ACTB-202ENST00000414620 PKN2Q16513 984 aaKnown RBP19.25■□□□□ 0.67
ACTB-202ENST00000414620 FKBP1CQ5VVH2 108 aa19.25■□□□□ 0.67
ACTB-202ENST00000414620 OTUD7BQ6GQQ9 843 aa19.25■□□□□ 0.67
ACTB-202ENST00000414620 ZKSCAN4Q969J2 545 aaPredicted RBP19.25■□□□□ 0.67
ACTB-202ENST00000414620 MS4A4AQ96JQ5 239 aa19.25■□□□□ 0.67
ACTB-202ENST00000414620 NEUROD6Q96NK8 337 aa19.25■□□□□ 0.67
ACTB-202ENST00000414620 USP40Q9NVE5 1235 aa19.25■□□□□ 0.67
ACTB-202ENST00000414620 ABCF2Q9UG63 623 aa19.25■□□□□ 0.67
ACTB-202ENST00000414620 CCL15-CCL14A0A0B4J2E2 113 aa19.24■□□□□ 0.67
ACTB-202ENST00000414620 TESPA1A2RU30 521 aaPredicted RBP19.24■□□□□ 0.67
ACTB-202ENST00000414620 CCL15Q16663 113 aa19.24■□□□□ 0.67
ACTB-202ENST00000414620 DCAF15Q66K64 600 aa19.24■□□□□ 0.67
ACTB-202ENST00000414620 FBXO46Q6PJ61 603 aaPredicted RBP19.24■□□□□ 0.67
ACTB-202ENST00000414620 DZIP1Q86YF9 867 aaKnown RBP19.24■□□□□ 0.67
ACTB-202ENST00000414620 FAM151AQ8WW52 585 aa19.24■□□□□ 0.67
ACTB-202ENST00000414620 BRI3BPQ8WY22 251 aa19.24■□□□□ 0.67
ACTB-202ENST00000414620 AKAP2Q9Y2D5 859 aa19.24■□□□□ 0.67
ACTB-202ENST00000414620 TRIM17Q9Y577 477 aa19.24■□□□□ 0.67
ACTB-202ENST00000414620 SPDYE5A6NIY4 337 aa19.23■□□□□ 0.67
ACTB-202ENST00000414620 ZGPATQ8N5A5 531 aaKnown RBP19.23■□□□□ 0.67
ACTB-202ENST00000414620 CD99L2Q8TCZ2 262 aa19.23■□□□□ 0.67
ACTB-202ENST00000414620 HOOK2Q96ED9 719 aa19.23■□□□□ 0.67
ACTB-202ENST00000414620 ZNF341Q9BYN7 854 aa19.23■□□□□ 0.67
ACTB-202ENST00000414620 C1orf115Q9H7X2 142 aa19.23■□□□□ 0.67
ACTB-202ENST00000414620 FAM198AQ9UFP1 575 aa19.23■□□□□ 0.67
ACTB-202ENST00000414620 MAST2Q6P0Q8 1798 aa19.22■□□□□ 0.67
ACTB-202ENST00000414620 INPP5BP32019 993 aa19.22■□□□□ 0.67
ACTB-202ENST00000414620 GTF2A2P52657 109 aa19.22■□□□□ 0.67
ACTB-202ENST00000414620 MVPQ14764 893 aaKnown RBP19.22■□□□□ 0.67
ACTB-202ENST00000414620 DOCK1Q14185 1865 aa19.22■□□□□ 0.67
ACTB-202ENST00000414620 G3BP1Q13283 466 aaKnown RBP eCLIP19.21■□□□□ 0.671e-28■■□□□ 12.2
ACTB-202ENST00000414620 TAF1CQ15572 869 aaPredicted RBP19.21■□□□□ 0.67
ACTB-202ENST00000414620 ZFPM1Q8IX07 1006 aa19.21■□□□□ 0.67
ACTB-202ENST00000414620 FAM43AQ8N2R8 423 aa19.21■□□□□ 0.67
ACTB-202ENST00000414620 CDK5RAP2Q96SN8 1893 aa19.2■□□□□ 0.66
ACTB-202ENST00000414620 GORABQ5T7V8 394 aa19.2■□□□□ 0.66
ACTB-202ENST00000414620 PI16Q6UXB8 463 aa19.2■□□□□ 0.66
ACTB-202ENST00000414620 OTOP1Q7RTM1 612 aa19.2■□□□□ 0.66
ACTB-202ENST00000414620 ERO1BQ86YB8 467 aa19.2■□□□□ 0.66
ACTB-202ENST00000414620 FTSJ3Q8IY81 847 aaKnown RBP19.2■□□□□ 0.66
ACTB-202ENST00000414620 ERO1AQ96HE7 468 aa19.2■□□□□ 0.66
ACTB-202ENST00000414620 ATAD5Q96QE3 1844 aa19.2■□□□□ 0.66
ACTB-202ENST00000414620 GAKO14976 1311 aa19.2■□□□□ 0.66
ACTB-202ENST00000414620 IRF6O14896 467 aa19.19■□□□□ 0.66
ACTB-202ENST00000414620 BTDP43251 543 aa19.19■□□□□ 0.66
ACTB-202ENST00000414620 RGS3P49796 1198 aa19.19■□□□□ 0.66
ACTB-202ENST00000414620 ERICH6Q7L0X2 663 aa19.19■□□□□ 0.66
ACTB-202ENST00000414620 ITPRIPQ8IWB1 547 aa19.19■□□□□ 0.66
ACTB-202ENST00000414620 HMG20BQ9P0W2 317 aa19.19■□□□□ 0.66
ACTB-202ENST00000414620 PTPRFP10586 1907 aa19.19■□□□□ 0.66
ACTB-202ENST00000414620 PDS5AQ29RF7 1337 aaKnown RBP19.19■□□□□ 0.66
ACTB-202ENST00000414620 RFX7Q2KHR2 1363 aa19.19■□□□□ 0.66
ACTB-202ENST00000414620 PHIPQ8WWQ0 1821 aa19.18■□□□□ 0.66
ACTB-202ENST00000414620 RLBP1P12271 317 aa19.18■□□□□ 0.66
ACTB-202ENST00000414620 CAP1Q01518 475 aa19.18■□□□□ 0.66
ACTB-202ENST00000414620 SP3Q02447 781 aa19.18■□□□□ 0.66
ACTB-202ENST00000414620 PPIL2Q13356 520 aa19.18■□□□□ 0.66
ACTB-202ENST00000414620 PICALMQ13492 652 aa19.18■□□□□ 0.66
ACTB-202ENST00000414620 ZFYVE28Q9HCC9 887 aa19.18■□□□□ 0.66
ACTB-202ENST00000414620 MROH7-TTC4A0A0A0MT08 1334 aa19.18■□□□□ 0.66
ACTB-202ENST00000414620 ZBTB22O15209 634 aa19.17■□□□□ 0.66
ACTB-202ENST00000414620 CETPP11597 493 aa19.17■□□□□ 0.66
ACTB-202ENST00000414620 MECOMQ03112 1051 aa19.17■□□□□ 0.66
ACTB-202ENST00000414620 OS9Q13438 667 aaPredicted RBP19.17■□□□□ 0.66
ACTB-202ENST00000414620 SNAPC2Q13487 334 aa19.17■□□□□ 0.66
ACTB-202ENST00000414620 SPTY2D1Q68D10 685 aaPredicted RBP19.17■□□□□ 0.66
ACTB-202ENST00000414620 TBC1D9Q6ZT07 1266 aa19.17■□□□□ 0.66
ACTB-202ENST00000414620 ZSCAN29Q8IWY8 852 aaPredicted RBP19.17■□□□□ 0.66
ACTB-202ENST00000414620 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.17■□□□□ 0.66
ACTB-202ENST00000414620 RBBP6Q7Z6E9 1792 aaKnown RBP19.16■□□□□ 0.66
ACTB-202ENST00000414620 BTBD19C9JJ37 291 aa19.16■□□□□ 0.66
ACTB-202ENST00000414620 SLURP2P0DP57 97 aa19.16■□□□□ 0.66
ACTB-202ENST00000414620 POLA2Q14181 598 aa19.16■□□□□ 0.66
ACTB-202ENST00000414620 SLF2Q8IX21 1173 aa19.16■□□□□ 0.66
ACTB-202ENST00000414620 SPATA5Q8NB90 893 aa19.16■□□□□ 0.66
ACTB-202ENST00000414620 EFCC1Q9HA90 598 aa19.16■□□□□ 0.66
ACTB-202ENST00000414620 DDX4Q9NQI0 724 aaKnown RBP19.16■□□□□ 0.66
ACTB-202ENST00000414620 ZNF112Q9UJU3 913 aa19.16■□□□□ 0.66
ACTB-202ENST00000414620 ZBED9Q6R2W3 1325 aa19.16■□□□□ 0.66
ACTB-202ENST00000414620 FOCADQ5VW36 1801 aa19.16■□□□□ 0.66
ACTB-202ENST00000414620 ECM2O94769 699 aaPredicted RBP19.15■□□□□ 0.66
ACTB-202ENST00000414620 ARID4AP29374 1257 aaPredicted RBP19.15■□□□□ 0.66
ACTB-202ENST00000414620 MCAMP43121 646 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms