RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 TTF2Q9UNY4 1162 aaKnown RBP11.92□□□□□ -0.5
DDB1-202ENST00000414411 MYH2Q9UKX2 1941 aa11.92□□□□□ -0.5
DDB1-202ENST00000414411 ZNF532Q9HCE3 1301 aa11.92□□□□□ -0.5
DDB1-202ENST00000414411 HIP1O00291 1037 aa11.92□□□□□ -0.5
DDB1-202ENST00000414411 MMP14P50281 582 aa11.92□□□□□ -0.5
DDB1-202ENST00000414411 HDLBPQ00341 1268 aaKnown RBP11.92□□□□□ -0.5
DDB1-202ENST00000414411 DIXDC1Q155Q3 683 aa11.92□□□□□ -0.5
DDB1-202ENST00000414411 ZMYM1Q5SVZ6 1142 aa11.92□□□□□ -0.5
DDB1-202ENST00000414411 NAA16Q6N069 864 aaPredicted RBP11.92□□□□□ -0.5
DDB1-202ENST00000414411 F8W031 263 aaPredicted RBP11.91□□□□□ -0.5
DDB1-202ENST00000414411 DDNO94850 711 aaPredicted RBP11.91□□□□□ -0.5
DDB1-202ENST00000414411 REC8O95072 547 aa11.91□□□□□ -0.5
DDB1-202ENST00000414411 USP17L8P0C7I0 530 aa11.91□□□□□ -0.5
DDB1-202ENST00000414411 GMPSP49915 693 aaPredicted RBP11.91□□□□□ -0.5
DDB1-202ENST00000414411 HHIPL2Q6UWX4 724 aa11.91□□□□□ -0.5
DDB1-202ENST00000414411 DZIP1Q86YF9 867 aaKnown RBP11.91□□□□□ -0.5
DDB1-202ENST00000414411 OSBP2Q969R2 916 aa11.91□□□□□ -0.5
DDB1-202ENST00000414411 FAM227BQ96M60 508 aa11.91□□□□□ -0.5
DDB1-202ENST00000414411 GJA3Q9Y6H8 435 aa11.91□□□□□ -0.5
DDB1-202ENST00000414411 GAKO14976 1311 aa11.91□□□□□ -0.5
DDB1-202ENST00000414411 MAST3O60307 1309 aa11.91□□□□□ -0.5
DDB1-202ENST00000414411 A0A0D9SFI3 127 aa11.9□□□□□ -0.5
DDB1-202ENST00000414411 ECM2O94769 699 aaPredicted RBP11.9□□□□□ -0.5
DDB1-202ENST00000414411 LDHCP07864 332 aa11.9□□□□□ -0.5
DDB1-202ENST00000414411 CYP7A1P22680 504 aa11.9□□□□□ -0.5
DDB1-202ENST00000414411 SCNN1DP51172 638 aa11.9□□□□□ -0.5
DDB1-202ENST00000414411 ZNF280AP59817 542 aaPredicted RBP11.9□□□□□ -0.5
DDB1-202ENST00000414411 GSTO1P78417 241 aa11.9□□□□□ -0.5
DDB1-202ENST00000414411 NMIQ13287 307 aaPredicted RBP11.9□□□□□ -0.5
DDB1-202ENST00000414411 APPBP2Q92624 585 aa11.9□□□□□ -0.5
DDB1-202ENST00000414411 PUS7LQ9H0K6 701 aaKnown RBP11.9□□□□□ -0.5
DDB1-202ENST00000414411 HELLSQ9NRZ9 838 aa11.9□□□□□ -0.5
DDB1-202ENST00000414411 SERPINA10Q9UK55 444 aa11.9□□□□□ -0.5
DDB1-202ENST00000414411 MAST2Q6P0Q8 1798 aa11.9□□□□□ -0.5
DDB1-202ENST00000414411 GPR75-ASB3A0A0A6YYF3 556 aa11.9□□□□□ -0.51
DDB1-202ENST00000414411 GLTPD2A6NH11 291 aa11.9□□□□□ -0.51
DDB1-202ENST00000414411 HSP90AA1P07900 732 aaKnown RBP11.9□□□□□ -0.51
DDB1-202ENST00000414411 DPY19L2Q6NUT2 758 aa11.9□□□□□ -0.51
DDB1-202ENST00000414411 CWC27Q6UX04 472 aaKnown RBP11.9□□□□□ -0.51
DDB1-202ENST00000414411 SLF2Q8IX21 1173 aa11.9□□□□□ -0.51
DDB1-202ENST00000414411 SEC62Q99442 399 aaKnown RBP11.9□□□□□ -0.51
DDB1-202ENST00000414411 IL25Q9H293 177 aa11.9□□□□□ -0.51
DDB1-202ENST00000414411 DIAPH3Q9NSV4 1193 aa11.9□□□□□ -0.51
DDB1-202ENST00000414411 SHTN1A0MZ66 631 aa11.89□□□□□ -0.51
DDB1-202ENST00000414411 CRKP46108 304 aa11.89□□□□□ -0.51
DDB1-202ENST00000414411 PPP4CP60510 307 aa11.89□□□□□ -0.51
DDB1-202ENST00000414411 RAB3GAP1Q15042 981 aa11.89□□□□□ -0.51
DDB1-202ENST00000414411 MCMDC2Q4G0Z9 681 aa11.89□□□□□ -0.51
DDB1-202ENST00000414411 APOBEC3HQ6NTF7 200 aaKnown RBP11.89□□□□□ -0.51
DDB1-202ENST00000414411 OGFOD1Q8N543 542 aa11.89□□□□□ -0.51
DDB1-202ENST00000414411 TEKT1Q969V4 418 aa11.89□□□□□ -0.51
DDB1-202ENST00000414411 ZBED3Q96IU2 234 aaPredicted RBP11.89□□□□□ -0.51
DDB1-202ENST00000414411 L3MBTL3Q96JM7 780 aaPredicted RBP11.89□□□□□ -0.51
DDB1-202ENST00000414411 ZDHHC15Q96MV8 337 aa11.89□□□□□ -0.51
DDB1-202ENST00000414411 RIOK1Q9BRS2 568 aaKnown RBP11.89□□□□□ -0.51
DDB1-202ENST00000414411 GPRC5DQ9NZD1 345 aa11.89□□□□□ -0.51
DDB1-202ENST00000414411 CNOT7Q9UIV1 285 aaKnown RBP11.89□□□□□ -0.51
DDB1-202ENST00000414411 DAGLAQ9Y4D2 1042 aa11.89□□□□□ -0.51
DDB1-202ENST00000414411 MROH7-TTC4A0A0A0MT08 1334 aa11.89□□□□□ -0.51
DDB1-202ENST00000414411 DDX11L8A8MPP1 907 aa11.88□□□□□ -0.51
DDB1-202ENST00000414411 SGSM2O43147 1006 aa11.88□□□□□ -0.51
DDB1-202ENST00000414411 MTMR14Q8NCE2 650 aa11.88□□□□□ -0.51
DDB1-202ENST00000414411 PCDHAC2Q9Y5I4 1007 aa11.88□□□□□ -0.51
DDB1-202ENST00000414411 M0R2C6 588 aa11.88□□□□□ -0.51
DDB1-202ENST00000414411 MICALL2Q8IY33 904 aa11.88□□□□□ -0.51
DDB1-202ENST00000414411 MIGA1Q8NAN2 632 aa11.88□□□□□ -0.51
DDB1-202ENST00000414411 STRBPQ96SI9 672 aaKnown RBP11.88□□□□□ -0.51
DDB1-202ENST00000414411 ESYT1Q9BSJ8 1104 aa11.88□□□□□ -0.51
DDB1-202ENST00000414411 HDAC9Q9UKV0 1011 aa11.88□□□□□ -0.51
DDB1-202ENST00000414411 EPS15P42566 896 aa11.87□□□□□ -0.51
DDB1-202ENST00000414411 RHBDL3P58872 404 aa11.87□□□□□ -0.51
DDB1-202ENST00000414411 CFAP100Q494V2 611 aa11.87□□□□□ -0.51
DDB1-202ENST00000414411 ZNF589Q86UQ0 364 aaPredicted RBP11.87□□□□□ -0.51
DDB1-202ENST00000414411 RUFY2Q8WXA3 655 aa11.87□□□□□ -0.51
DDB1-202ENST00000414411 TNPO1Q92973 898 aaKnown RBP11.87□□□□□ -0.51
DDB1-202ENST00000414411 PRMT6Q96LA8 375 aaPredicted RBP11.87□□□□□ -0.51
DDB1-202ENST00000414411 MYOZ2Q9NPC6 264 aa11.87□□□□□ -0.51
DDB1-202ENST00000414411 AATFQ9NY61 560 aaKnown RBP eCLIP11.87□□□□□ -0.51
DDB1-202ENST00000414411 RAD50Q92878 1312 aa11.87□□□□□ -0.51
DDB1-202ENST00000414411 ADAMTSL1Q8N6G6 1762 aa11.87□□□□□ -0.51
DDB1-202ENST00000414411 MAGEB6P1A0A0J9YX57 407 aa11.86□□□□□ -0.51
DDB1-202ENST00000414411 POTECB2RU33 542 aa11.86□□□□□ -0.51
DDB1-202ENST00000414411 EGFRP00533 1210 aa11.86□□□□□ -0.51
DDB1-202ENST00000414411 BTDP43251 543 aa11.86□□□□□ -0.51
DDB1-202ENST00000414411 DYNLL1P63167 89 aaKnown RBP11.86□□□□□ -0.51
DDB1-202ENST00000414411 H7C1D1 291 aa11.86□□□□□ -0.51
DDB1-202ENST00000414411 FOXP2O15409 715 aa11.86□□□□□ -0.51
DDB1-202ENST00000414411 GPAA1O43292 621 aa11.86□□□□□ -0.51
DDB1-202ENST00000414411 MBD4O95243 580 aa11.86□□□□□ -0.51
DDB1-202ENST00000414411 BAG3O95817 575 aa11.86□□□□□ -0.51
DDB1-202ENST00000414411 DLGAP5Q15398 846 aa11.86□□□□□ -0.51
DDB1-202ENST00000414411 CCDC129Q6ZRS4 1044 aa11.86□□□□□ -0.51
DDB1-202ENST00000414411 SAMD7Q7Z3H4 446 aa11.86□□□□□ -0.51
DDB1-202ENST00000414411 LCORLQ8N3X6 602 aa11.86□□□□□ -0.51
DDB1-202ENST00000414411 AIDAQ96BJ3 306 aa11.86□□□□□ -0.51
DDB1-202ENST00000414411 ARMT1Q9H993 441 aa11.86□□□□□ -0.51
DDB1-202ENST00000414411 WNT10BO00744 389 aa11.85□□□□□ -0.51
DDB1-202ENST00000414411 ST18O60284 1047 aa11.85□□□□□ -0.51
DDB1-202ENST00000414411 TRAK2O60296 914 aa11.85□□□□□ -0.51
DDB1-202ENST00000414411 CDC42EP5Q6NZY7 148 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms