RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 POLA2Q14181 598 aa15.74■□□□□ 0.11
CLTCL1-201ENST00000412649 ZNF274Q96GC6 653 aaPredicted RBP15.74■□□□□ 0.11
CLTCL1-201ENST00000412649 NCAPGQ9BPX3 1015 aa15.74■□□□□ 0.11
CLTCL1-201ENST00000412649 CCT6AP40227 531 aaKnown RBP15.74■□□□□ 0.11
CLTCL1-201ENST00000412649 EPS15P42566 896 aa15.74■□□□□ 0.11
CLTCL1-201ENST00000412649 SCLT1Q96NL6 688 aa15.74■□□□□ 0.11
CLTCL1-201ENST00000412649 LOC102724159A0A0B4J2E5 919 aa15.74■□□□□ 0.11
CLTCL1-201ENST00000412649 KIF5AQ12840 1032 aa15.74■□□□□ 0.11
CLTCL1-201ENST00000412649 PWP2Q15269 919 aaKnown RBP15.74■□□□□ 0.11
CLTCL1-201ENST00000412649 CCDC96Q2M329 555 aa15.74■□□□□ 0.11
CLTCL1-201ENST00000412649 TACC1O75410 805 aa15.74■□□□□ 0.11
CLTCL1-201ENST00000412649 GNGT1P63211 74 aa15.74■□□□□ 0.11
CLTCL1-201ENST00000412649 POSTNQ15063 836 aa15.74■□□□□ 0.11
CLTCL1-201ENST00000412649 BPIFA3Q9BQP9 254 aa15.74■□□□□ 0.11
CLTCL1-201ENST00000412649 PSD3Q9NYI0 1048 aa15.74■□□□□ 0.11
CLTCL1-201ENST00000412649 POGZQ7Z3K3 1410 aa15.73■□□□□ 0.11
CLTCL1-201ENST00000412649 VAV2P52735 878 aa15.73■□□□□ 0.11
CLTCL1-201ENST00000412649 ANKRD18AQ8IVF6 992 aa15.73■□□□□ 0.11
CLTCL1-201ENST00000412649 LINC00301Q8NCQ3 95 aa15.73■□□□□ 0.11
CLTCL1-201ENST00000412649 KLHDC4Q8TBB5 520 aa15.73■□□□□ 0.11
CLTCL1-201ENST00000412649 AIDAQ96BJ3 306 aa15.73■□□□□ 0.11
CLTCL1-201ENST00000412649 CEP89Q96ST8 783 aa15.73■□□□□ 0.11
CLTCL1-201ENST00000412649 AKAP2Q9Y2D5 859 aa15.73■□□□□ 0.11
CLTCL1-201ENST00000412649 ADCY9O60503 1353 aa15.73■□□□□ 0.11
CLTCL1-201ENST00000412649 AMOTQ4VCS5 1084 aa15.73■□□□□ 0.11
CLTCL1-201ENST00000412649 CAPS2Q9BXY5 557 aa15.73■□□□□ 0.11
CLTCL1-201ENST00000412649 TANGO6Q9C0B7 1094 aa15.73■□□□□ 0.11
CLTCL1-201ENST00000412649 LUC7L2Q9Y383 392 aaKnown RBP15.73■□□□□ 0.11
CLTCL1-201ENST00000412649 ADGRB2O60241 1585 aa15.73■□□□□ 0.11
CLTCL1-201ENST00000412649 WWC3Q9ULE0 1092 aa15.73■□□□□ 0.11
CLTCL1-201ENST00000412649 KIAA1210Q9ULL0 1709 aa15.73■□□□□ 0.11
CLTCL1-201ENST00000412649 POLR2DO15514 142 aaKnown RBP15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 RNF113AO15541 343 aaKnown RBP15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 HOXB7P09629 217 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 UBXN1Q04323 297 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 CFAP58Q5T655 872 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 ZNF589Q86UQ0 364 aaPredicted RBP15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 SLF1Q9BQI6 1058 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 POLR3EQ9NVU0 708 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 NDUFB9Q9Y6M9 179 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 SYNRGQ9UMZ2 1314 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 TRIM14Q14142 442 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 BEND3Q5T5X7 828 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 RPGRIP1Q96KN7 1286 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 SETBP1Q9Y6X0 1596 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 ZFYP08048 801 aaPredicted RBP15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 LONRF3Q496Y0 759 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 TNNI3KQ59H18 835 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 RBM43Q6ZSC3 357 aaKnown RBP15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 SND1Q7KZF4 910 aaKnown RBP eCLIP15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 ARFGAP2Q8N6H7 521 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 CCDC51Q96ER9 411 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 NLRP2Q9NX02 1062 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 MRFAP1Q9Y605 127 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 FPGT-TNNI3KV9GXZ4 949 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 MYOM1P52179 1685 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 E7EWF7 191 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 IDEP14735 1019 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 SPECC1Q5M775 1068 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 SLC35F6Q8N357 371 aa15.72■□□□□ 0.11
CLTCL1-201ENST00000412649 FMR1NBQ8N0W7 255 aaPredicted RBP15.71■□□□□ 0.11
CLTCL1-201ENST00000412649 SUCLG2Q96I99 432 aa15.71■□□□□ 0.11
CLTCL1-201ENST00000412649 MTIF2P46199 727 aaKnown RBP15.71■□□□□ 0.11
CLTCL1-201ENST00000412649 KBTBD3Q8NAB2 608 aa15.71■□□□□ 0.11
CLTCL1-201ENST00000412649 SEC62Q99442 399 aaKnown RBP15.71■□□□□ 0.11
CLTCL1-201ENST00000412649 DBNDD2Q9BQY9 259 aa15.71■□□□□ 0.11
CLTCL1-201ENST00000412649 NAPBQ9H115 298 aa15.71■□□□□ 0.11
CLTCL1-201ENST00000412649 ATP5JP18859 108 aa15.71■□□□□ 0.11
CLTCL1-201ENST00000412649 NAA25Q14CX7 972 aa15.71■□□□□ 0.11
CLTCL1-201ENST00000412649 CYB5RLQ6IPT4 315 aa15.71■□□□□ 0.11
CLTCL1-201ENST00000412649 ZNF446Q9NWS9 450 aa15.71■□□□□ 0.11
CLTCL1-201ENST00000412649 SAR1BQ9Y6B6 198 aa15.71■□□□□ 0.11
CLTCL1-201ENST00000412649 AKR1B10O60218 316 aa15.71■□□□□ 0.1
CLTCL1-201ENST00000412649 TBC1D8O95759 1140 aa15.71■□□□□ 0.1
CLTCL1-201ENST00000412649 SSBP05455 408 aaKnown RBP eCLIP15.71■□□□□ 0.1
CLTCL1-201ENST00000412649 CYP21A2P08686 494 aa15.71■□□□□ 0.1
CLTCL1-201ENST00000412649 KRT9P35527 623 aa15.71■□□□□ 0.1
CLTCL1-201ENST00000412649 IFFO1Q0D2I5 559 aa15.71■□□□□ 0.1
CLTCL1-201ENST00000412649 PYM1Q9BRP8 204 aaKnown RBP15.71■□□□□ 0.1
CLTCL1-201ENST00000412649 VPS16Q9H269 839 aa15.71■□□□□ 0.1
CLTCL1-201ENST00000412649 CNNM1Q9NRU3 951 aa15.71■□□□□ 0.1
CLTCL1-201ENST00000412649 RMND1Q9NWS8 449 aa15.71■□□□□ 0.1
CLTCL1-201ENST00000412649 PCDHA5Q9Y5H7 936 aa15.71■□□□□ 0.1
CLTCL1-201ENST00000412649 ATP7BP35670 1465 aa15.7■□□□□ 0.1
CLTCL1-201ENST00000412649 MSL1Q68DK7 614 aa15.7■□□□□ 0.1
CLTCL1-201ENST00000412649 TRIM47Q96LD4 638 aa15.7■□□□□ 0.1
CLTCL1-201ENST00000412649 CARMIL3Q8ND23 1372 aa15.7■□□□□ 0.1
CLTCL1-201ENST00000412649 PDIA3P30101 505 aaKnown RBP15.7■□□□□ 0.1
CLTCL1-201ENST00000412649 YY1AP1Q9H869 796 aa15.7■□□□□ 0.1
CLTCL1-201ENST00000412649 ATP5J2-PTCD1G3V325 749 aa15.7■□□□□ 0.1
CLTCL1-201ENST00000412649 PTCD1O75127 700 aaKnown RBP15.7■□□□□ 0.1
CLTCL1-201ENST00000412649 RXRAP19793 462 aa15.7■□□□□ 0.1
CLTCL1-201ENST00000412649 CLNS1AP54105 237 aaKnown RBP15.7■□□□□ 0.1
CLTCL1-201ENST00000412649 WWC2Q6AWC2 1192 aa15.7■□□□□ 0.1
CLTCL1-201ENST00000412649 TAX1BP1Q86VP1 789 aa15.7■□□□□ 0.1
CLTCL1-201ENST00000412649 KRT40Q6A162 431 aa15.69■□□□□ 0.1
CLTCL1-201ENST00000412649 VPS37DQ86XT2 251 aa15.69■□□□□ 0.1
CLTCL1-201ENST00000412649 WDR24Q96S15 920 aa15.69■□□□□ 0.1
CLTCL1-201ENST00000412649 CACNA2D4Q7Z3S7 1137 aa15.69■□□□□ 0.1
CLTCL1-201ENST00000412649 DSCC1Q9BVC3 393 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms