RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 CHD8Q9HCK8 2581 aa9.39□□□□□ -0.91
UBE2F-204ENST00000409953 XIRP2A4UGR9 3374 aa9.38□□□□□ -0.91
UBE2F-204ENST00000409953 SPDYE5A6NIY4 337 aa9.38□□□□□ -0.91
UBE2F-204ENST00000409953 U2AF1L5P0DN76 240 aaPredicted RBP9.38□□□□□ -0.91
UBE2F-204ENST00000409953 COL6A1P12109 1028 aa9.38□□□□□ -0.91
UBE2F-204ENST00000409953 DNAJB2P25686 324 aa9.38□□□□□ -0.91
UBE2F-204ENST00000409953 MMP14P50281 582 aa9.38□□□□□ -0.91
UBE2F-204ENST00000409953 U2AF1Q01081 240 aaKnown RBP eCLIP9.38□□□□□ -0.91
UBE2F-204ENST00000409953 ASTLQ6HA08 431 aaPredicted RBP9.38□□□□□ -0.91
UBE2F-204ENST00000409953 EFCAB3Q8N7B9 438 aa9.38□□□□□ -0.91
UBE2F-204ENST00000409953 PHOX2BQ99453 314 aa9.38□□□□□ -0.91
UBE2F-204ENST00000409953 ZNF576Q9H609 170 aa9.38□□□□□ -0.91
UBE2F-204ENST00000409953 VEZTQ9HBM0 779 aa9.38□□□□□ -0.91
UBE2F-204ENST00000409953 PRKAG2Q9UGJ0 569 aa9.38□□□□□ -0.91
UBE2F-204ENST00000409953 EPG5Q9HCE0 2579 aa9.37□□□□□ -0.91
UBE2F-204ENST00000409953 SH3TC1Q8TE82 1336 aa9.37□□□□□ -0.91
UBE2F-204ENST00000409953 USP34Q70CQ2 3546 aa9.37□□□□□ -0.91
UBE2F-204ENST00000409953 CLRN2A0PK11 232 aa9.37□□□□□ -0.91
UBE2F-204ENST00000409953 PDHXO00330 501 aa9.37□□□□□ -0.91
UBE2F-204ENST00000409953 BCRP11274 1271 aa9.37□□□□□ -0.91
UBE2F-204ENST00000409953 MAP3K9P80192 1104 aa9.37□□□□□ -0.91
UBE2F-204ENST00000409953 DLGAP5Q15398 846 aa9.37□□□□□ -0.91
UBE2F-204ENST00000409953 AAK1Q2M2I8 961 aa9.37□□□□□ -0.91
UBE2F-204ENST00000409953 GAS2L2Q8NHY3 880 aa9.37□□□□□ -0.91
UBE2F-204ENST00000409953 MFRPQ9BY79 579 aa9.37□□□□□ -0.91
UBE2F-204ENST00000409953 KCNH6Q9H252 994 aa9.37□□□□□ -0.91
UBE2F-204ENST00000409953 PRDM12Q9H4Q4 367 aa9.37□□□□□ -0.91
UBE2F-204ENST00000409953 HMX1Q9NP08 348 aaPredicted RBP9.37□□□□□ -0.91
UBE2F-204ENST00000409953 TRMT112Q9UI30 125 aaKnown RBP9.37□□□□□ -0.91
UBE2F-204ENST00000409953 MAST2Q6P0Q8 1798 aa9.37□□□□□ -0.91
UBE2F-204ENST00000409953 WDFY4Q6ZS81 3184 aa9.36□□□□□ -0.91
UBE2F-204ENST00000409953 PI4K2BG5E9Z4 385 aa9.36□□□□□ -0.91
UBE2F-204ENST00000409953 TNPO2O14787 897 aaKnown RBP9.36□□□□□ -0.91
UBE2F-204ENST00000409953 IRF6O14896 467 aa9.36□□□□□ -0.91
UBE2F-204ENST00000409953 RASA3Q14644 834 aa9.36□□□□□ -0.91
UBE2F-204ENST00000409953 STRIP1Q5VSL9 837 aa9.36□□□□□ -0.91
UBE2F-204ENST00000409953 ANKRD23Q86SG2 305 aa9.36□□□□□ -0.91
UBE2F-204ENST00000409953 ZFHX4Q86UP3 3567 aa9.35□□□□□ -0.91
UBE2F-204ENST00000409953 HMGCRP04035 888 aa9.35□□□□□ -0.91
UBE2F-204ENST00000409953 IGFBP4P22692 258 aa9.35□□□□□ -0.91
UBE2F-204ENST00000409953 RPS8P62241 208 aaKnown RBP9.35□□□□□ -0.91
UBE2F-204ENST00000409953 ADGRE1Q14246 886 aa9.35□□□□□ -0.91
UBE2F-204ENST00000409953 RIC3Q7Z5B4 369 aa9.35□□□□□ -0.91
UBE2F-204ENST00000409953 NLRP10Q86W26 655 aa9.35□□□□□ -0.91
UBE2F-204ENST00000409953 ERO1BQ86YB8 467 aa9.35□□□□□ -0.91
UBE2F-204ENST00000409953 FBXO22Q8NEZ5 403 aa9.35□□□□□ -0.91
UBE2F-204ENST00000409953 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.35□□□□□ -0.91
UBE2F-204ENST00000409953 SP7Q8TDD2 431 aaPredicted RBP9.35□□□□□ -0.91
UBE2F-204ENST00000409953 TIFAQ96CG3 184 aa9.35□□□□□ -0.91
UBE2F-204ENST00000409953 RNPC3Q96LT9 517 aaKnown RBP9.35□□□□□ -0.91
UBE2F-204ENST00000409953 PCDHAC2Q9Y5I4 1007 aa9.35□□□□□ -0.91
UBE2F-204ENST00000409953 SNCAIPQ9Y6H5 919 aa9.35□□□□□ -0.91
UBE2F-204ENST00000409953 ECM29Q5VYK3 1845 aa9.35□□□□□ -0.91
UBE2F-204ENST00000409953 ATMINO43313 823 aaPredicted RBP9.34□□□□□ -0.91
UBE2F-204ENST00000409953 MYO1BO43795 1136 aa9.34□□□□□ -0.91
UBE2F-204ENST00000409953 ITGB8P26012 769 aa9.34□□□□□ -0.91
UBE2F-204ENST00000409953 TRIM32Q13049 653 aa9.34□□□□□ -0.91
UBE2F-204ENST00000409953 ERMP1Q7Z2K6 904 aa9.34□□□□□ -0.91
UBE2F-204ENST00000409953 PARK7Q99497 189 aaKnown RBP9.34□□□□□ -0.91
UBE2F-204ENST00000409953 MYO9BQ13459 2157 aa9.33□□□□□ -0.92
UBE2F-204ENST00000409953 CYP2C8P10632 490 aa9.33□□□□□ -0.92
UBE2F-204ENST00000409953 PPIL2Q13356 520 aa9.33□□□□□ -0.92
UBE2F-204ENST00000409953 SF3B3Q15393 1217 aaKnown RBP9.33□□□□□ -0.92
UBE2F-204ENST00000409953 CDAN1Q8IWY9 1227 aa9.33□□□□□ -0.92
UBE2F-204ENST00000409953 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.33□□□□□ -0.92
UBE2F-204ENST00000409953 BADQ92934 168 aa9.33□□□□□ -0.92
UBE2F-204ENST00000409953 ZNF428Q96B54 188 aa9.33□□□□□ -0.92
UBE2F-204ENST00000409953 C5orf42Q9H799 3197 aa9.32□□□□□ -0.92
UBE2F-204ENST00000409953 XDHP47989 1333 aa9.32□□□□□ -0.92
UBE2F-204ENST00000409953 AOX1Q06278 1338 aa9.32□□□□□ -0.92
UBE2F-204ENST00000409953 LRRC37A2A6NM11 1700 aa9.32□□□□□ -0.92
UBE2F-204ENST00000409953 GOLGA2Q08379 1002 aa9.32□□□□□ -0.92
UBE2F-204ENST00000409953 CSPP1Q1MSJ5 1256 aa9.32□□□□□ -0.92
UBE2F-204ENST00000409953 COA7Q96BR5 231 aa9.32□□□□□ -0.92
UBE2F-204ENST00000409953 TRIM35Q9UPQ4 493 aa9.32□□□□□ -0.92
UBE2F-204ENST00000409953 ATRXP46100 2492 aa9.32□□□□□ -0.92
UBE2F-204ENST00000409953 KMT2BQ9UMN6 2715 aaPredicted RBP9.31□□□□□ -0.92
UBE2F-204ENST00000409953 ATN1P54259 1190 aaPredicted RBP9.31□□□□□ -0.92
UBE2F-204ENST00000409953 KCTD2Q14681 263 aa9.31□□□□□ -0.92
UBE2F-204ENST00000409953 TTLL5Q6EMB2 1281 aa9.31□□□□□ -0.92
UBE2F-204ENST00000409953 MORC1Q86VD1 984 aa9.31□□□□□ -0.92
UBE2F-204ENST00000409953 MICALL1Q8N3F8 863 aa9.31□□□□□ -0.92
UBE2F-204ENST00000409953 SENP6Q9GZR1 1112 aaPredicted RBP9.31□□□□□ -0.92
UBE2F-204ENST00000409953 PRDM5Q9NQX1 630 aaPredicted RBP9.31□□□□□ -0.92
UBE2F-204ENST00000409953 KCNH4Q9UQ05 1017 aa9.31□□□□□ -0.92
UBE2F-204ENST00000409953 MED23Q9ULK4 1368 aa9.31□□□□□ -0.92
UBE2F-204ENST00000409953 DNAH12Q6ZR08 3092 aa9.3□□□□□ -0.92
UBE2F-204ENST00000409953 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.3□□□□□ -0.92
UBE2F-204ENST00000409953 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.3□□□□□ -0.92
UBE2F-204ENST00000409953 ERC2O15083 957 aa9.3□□□□□ -0.92
UBE2F-204ENST00000409953 GFRA3O60609 400 aa9.3□□□□□ -0.92
UBE2F-204ENST00000409953 RGS20O76081 388 aa9.3□□□□□ -0.92
UBE2F-204ENST00000409953 ATP2B4P23634 1241 aa9.3□□□□□ -0.92
UBE2F-204ENST00000409953 RTP1P59025 263 aa9.3□□□□□ -0.92
UBE2F-204ENST00000409953 TNFAIP1Q13829 316 aa9.3□□□□□ -0.92
UBE2F-204ENST00000409953 SKIV2LQ15477 1246 aaKnown RBP9.3□□□□□ -0.92
UBE2F-204ENST00000409953 CFAP100Q494V2 611 aa9.3□□□□□ -0.92
UBE2F-204ENST00000409953 HSP90AB3PQ58FF7 597 aa9.3□□□□□ -0.92
UBE2F-204ENST00000409953 IER5LQ5T953 404 aa9.3□□□□□ -0.92
UBE2F-204ENST00000409953 PRMT6Q96LA8 375 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms