RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 BRAPQ7Z569 592 aa20.86■□□□□ 0.93
CHTOP-205ENST00000403433 FNBP4Q8N3X1 1017 aaPredicted RBP20.86■□□□□ 0.93
CHTOP-205ENST00000403433 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.86■□□□□ 0.93
CHTOP-205ENST00000403433 IQSEC3Q9UPP2 1182 aaPredicted RBP20.86■□□□□ 0.93
CHTOP-205ENST00000403433 PRKAB2O43741 272 aa20.86■□□□□ 0.93
CHTOP-205ENST00000403433 RPS6KA4O75676 772 aa20.86■□□□□ 0.93
CHTOP-205ENST00000403433 CYP7A1P22680 504 aa20.86■□□□□ 0.93
CHTOP-205ENST00000403433 GYG1P46976 350 aa20.86■□□□□ 0.93
CHTOP-205ENST00000403433 ME1P48163 572 aa20.86■□□□□ 0.93
CHTOP-205ENST00000403433 SGMS1Q86VZ5 419 aa20.86■□□□□ 0.93
CHTOP-205ENST00000403433 MICU3Q86XE3 530 aa20.86■□□□□ 0.93
CHTOP-205ENST00000403433 VPS37DQ86XT2 251 aa20.86■□□□□ 0.93
CHTOP-205ENST00000403433 MIGA1Q8NAN2 632 aa20.86■□□□□ 0.93
CHTOP-205ENST00000403433 IGDCC4Q8TDY8 1250 aa20.86■□□□□ 0.93
CHTOP-205ENST00000403433 BCL2L12Q9HB09 334 aa20.86■□□□□ 0.93
CHTOP-205ENST00000403433 LY9Q9HBG7 655 aa20.86■□□□□ 0.93
CHTOP-205ENST00000403433 RTEL1Q9NZ71 1219 aa20.86■□□□□ 0.93
CHTOP-205ENST00000403433 PTF1AQ7RTS3 328 aa20.85■□□□□ 0.93
CHTOP-205ENST00000403433 SETDB2Q96T68 719 aa20.85■□□□□ 0.93
CHTOP-205ENST00000403433 ABCF2Q9UG63 623 aa20.85■□□□□ 0.93
CHTOP-205ENST00000403433 GOLGA8AA7E2F4 631 aa20.84■□□□□ 0.93
CHTOP-205ENST00000403433 IFIT3O14879 490 aaKnown RBP20.84■□□□□ 0.93
CHTOP-205ENST00000403433 GNPATO15228 680 aa20.84■□□□□ 0.93
CHTOP-205ENST00000403433 ZNF500O60304 480 aaPredicted RBP20.84■□□□□ 0.93
CHTOP-205ENST00000403433 ZPR1O75312 459 aa20.84■□□□□ 0.93
CHTOP-205ENST00000403433 LIFRP42702 1097 aa20.84■□□□□ 0.93
CHTOP-205ENST00000403433 PLCB2Q00722 1185 aa20.84■□□□□ 0.93
CHTOP-205ENST00000403433 STAG1Q8WVM7 1258 aa20.84■□□□□ 0.93
CHTOP-205ENST00000403433 RAI14Q9P0K7 980 aa20.84■□□□□ 0.93
CHTOP-205ENST00000403433 MINPP1Q9UNW1 487 aa20.84■□□□□ 0.93
CHTOP-205ENST00000403433 COL1A1P02452 1464 aaPredicted RBP20.84■□□□□ 0.93
CHTOP-205ENST00000403433 MYH13Q9UKX3 1938 aa20.84■□□□□ 0.93
CHTOP-205ENST00000403433 CTAGE5O15320 804 aa20.84■□□□□ 0.93
CHTOP-205ENST00000403433 RXRAP19793 462 aa20.84■□□□□ 0.93
CHTOP-205ENST00000403433 ANO6Q4KMQ2 910 aa20.84■□□□□ 0.93
CHTOP-205ENST00000403433 NBPF5PQ86XG9 351 aaPredicted RBP20.84■□□□□ 0.93
CHTOP-205ENST00000403433 NAP1L5Q96NT1 182 aaPredicted RBP20.84■□□□□ 0.93
CHTOP-205ENST00000403433 SENP2Q9HC62 589 aa20.84■□□□□ 0.93
CHTOP-205ENST00000403433 INCENPQ9NQS7 918 aa20.84■□□□□ 0.93
CHTOP-205ENST00000403433 ZSWIM5Q9P217 1185 aa20.84■□□□□ 0.93
CHTOP-205ENST00000403433 SRP68Q9UHB9 627 aaKnown RBP20.84■□□□□ 0.93
CHTOP-205ENST00000403433 USP21Q9UK80 565 aa20.84■□□□□ 0.93
CHTOP-205ENST00000403433 CCDC69A6NI79 296 aa20.83■□□□□ 0.93
CHTOP-205ENST00000403433 SMIM5Q71RC9 77 aa20.83■□□□□ 0.93
CHTOP-205ENST00000403433 CELF1Q92879 486 aaKnown RBP20.83■□□□□ 0.93
CHTOP-205ENST00000403433 ALG1Q9BT22 464 aa20.83■□□□□ 0.93
CHTOP-205ENST00000403433 GOLPH3LQ9H4A5 285 aa20.83■□□□□ 0.93
CHTOP-205ENST00000403433 RNF41Q9H4P4 317 aaPredicted RBP20.83■□□□□ 0.93
CHTOP-205ENST00000403433 CCNL1Q9UK58 526 aaPredicted RBP20.83■□□□□ 0.93
CHTOP-205ENST00000403433 SLC12A7Q9Y666 1083 aa20.83■□□□□ 0.93
CHTOP-205ENST00000403433 MAGEB6P1A0A0J9YX57 407 aa20.82■□□□□ 0.92
CHTOP-205ENST00000403433 KINO60870 393 aaKnown RBP20.82■□□□□ 0.92
CHTOP-205ENST00000403433 POLR3DP05423 398 aaPredicted RBP20.82■□□□□ 0.92
CHTOP-205ENST00000403433 SART3Q15020 963 aaKnown RBP20.82■□□□□ 0.92
CHTOP-205ENST00000403433 STK38Q15208 465 aa20.82■□□□□ 0.92
CHTOP-205ENST00000403433 RRP12Q5JTH9 1297 aaKnown RBP20.82■□□□□ 0.92
CHTOP-205ENST00000403433 SYNE3Q6ZMZ3 975 aa20.82■□□□□ 0.92
CHTOP-205ENST00000403433 FSIP1Q8NA03 581 aa20.82■□□□□ 0.92
CHTOP-205ENST00000403433 NLRP3Q96P20 1036 aa20.82■□□□□ 0.92
CHTOP-205ENST00000403433 TOMM22Q9NS69 142 aa20.82■□□□□ 0.92
CHTOP-205ENST00000403433 CACNA1SQ13698 1873 aa20.82■□□□□ 0.92
CHTOP-205ENST00000403433 TAF1LQ8IZX4 1826 aa20.82■□□□□ 0.92
CHTOP-205ENST00000403433 YEATS4O95619 227 aa20.82■□□□□ 0.92
CHTOP-205ENST00000403433 CDC27P30260 824 aa20.82■□□□□ 0.92
CHTOP-205ENST00000403433 KIF23Q02241 960 aaPredicted RBP20.82■□□□□ 0.92
CHTOP-205ENST00000403433 FAM160A1Q05DH4 1040 aa20.82■□□□□ 0.92
CHTOP-205ENST00000403433 SF3A1Q15459 793 aaKnown RBP20.82■□□□□ 0.92
CHTOP-205ENST00000403433 MYSM1Q5VVJ2 828 aa20.82■□□□□ 0.92
CHTOP-205ENST00000403433 KCNG4Q8TDN1 519 aa20.82■□□□□ 0.92
CHTOP-205ENST00000403433 POLR3EQ9NVU0 708 aa20.82■□□□□ 0.92
CHTOP-205ENST00000403433 RTCBQ9Y3I0 505 aaKnown RBP20.82■□□□□ 0.92
CHTOP-205ENST00000403433 LY75O60449 1722 aa20.81■□□□□ 0.92
CHTOP-205ENST00000403433 CCDC144CPQ8IYA2 1237 aa20.81■□□□□ 0.92
CHTOP-205ENST00000403433 GJB4Q9NTQ9 266 aa20.81■□□□□ 0.92
CHTOP-205ENST00000403433 IARSP41252 1262 aaKnown RBP20.8■□□□□ 0.92
CHTOP-205ENST00000403433 ADGRA1Q86SQ6 560 aa20.8■□□□□ 0.92
CHTOP-205ENST00000403433 LINC00301Q8NCQ3 95 aa20.8■□□□□ 0.92
CHTOP-205ENST00000403433 MRPS27Q92552 414 aaKnown RBP20.8■□□□□ 0.92
CHTOP-205ENST00000403433 MYL10Q9BUA6 226 aa20.8■□□□□ 0.92
CHTOP-205ENST00000403433 CBX8Q9HC52 389 aa20.8■□□□□ 0.92
CHTOP-205ENST00000403433 PCDHA7Q9UN72 937 aa20.8■□□□□ 0.92
CHTOP-205ENST00000403433 CLIC4Q9Y696 253 aa20.8■□□□□ 0.92
CHTOP-205ENST00000403433 TACC3Q9Y6A5 838 aa20.8■□□□□ 0.92
CHTOP-205ENST00000403433 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.8■□□□□ 0.92
CHTOP-205ENST00000403433 SPATA31A6Q5VVP1 1343 aa20.8■□□□□ 0.92
CHTOP-205ENST00000403433 NID2Q14112 1375 aa20.8■□□□□ 0.92
CHTOP-205ENST00000403433 A0A1W2PQ27 194 aa20.8■□□□□ 0.92
CHTOP-205ENST00000403433 A0A1W2PQ64 194 aa20.8■□□□□ 0.92
CHTOP-205ENST00000403433 A0A1W2PQD8 194 aa20.8■□□□□ 0.92
CHTOP-205ENST00000403433 ERICH2A1L162 156 aa20.8■□□□□ 0.92
CHTOP-205ENST00000403433 KIF28PB7ZC32 967 aa20.8■□□□□ 0.92
CHTOP-205ENST00000403433 SEMA3EO15041 775 aa20.8■□□□□ 0.92
CHTOP-205ENST00000403433 CAVIN2O95810 425 aa20.8■□□□□ 0.92
CHTOP-205ENST00000403433 RPS8P62241 208 aaKnown RBP20.8■□□□□ 0.92
CHTOP-205ENST00000403433 PPARAQ07869 468 aa20.8■□□□□ 0.92
CHTOP-205ENST00000403433 TRIM29Q14134 588 aa20.8■□□□□ 0.92
CHTOP-205ENST00000403433 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.8■□□□□ 0.92
CHTOP-205ENST00000403433 LUZP1Q86V48 1076 aa20.8■□□□□ 0.92
CHTOP-205ENST00000403433 PHKBQ93100 1093 aa20.8■□□□□ 0.92
CHTOP-205ENST00000403433 STK36Q9NRP7 1315 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms