RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 GPR108Q9NPR9 543 aa18.93■□□□□ 0.62
SNX9-201ENST00000392185 MAST3O60307 1309 aa18.93■□□□□ 0.62
SNX9-201ENST00000392185 ZMYM1Q5SVZ6 1142 aa18.93■□□□□ 0.62
SNX9-201ENST00000392185 TTF2Q9UNY4 1162 aaKnown RBP18.93■□□□□ 0.62
SNX9-201ENST00000392185 SCNN1DP51172 638 aa18.93■□□□□ 0.62
SNX9-201ENST00000392185 MTX1Q13505 466 aa18.93■□□□□ 0.62
SNX9-201ENST00000392185 NOM1Q5C9Z4 860 aaKnown RBP18.93■□□□□ 0.62
SNX9-201ENST00000392185 CCDC70Q6NSX1 233 aa18.93■□□□□ 0.62
SNX9-201ENST00000392185 CALML4Q96GE6 196 aa18.93■□□□□ 0.62
SNX9-201ENST00000392185 UBE4AQ14139 1066 aa18.92■□□□□ 0.62
SNX9-201ENST00000392185 KIAA0825Q8IV33 1275 aa18.92■□□□□ 0.62
SNX9-201ENST00000392185 DIS3L2Q8IYB7 885 aaKnown RBP18.92■□□□□ 0.62
SNX9-201ENST00000392185 ZNF830Q96NB3 372 aaPredicted RBP18.92■□□□□ 0.62
SNX9-201ENST00000392185 PLIN2Q99541 437 aa18.92■□□□□ 0.62
SNX9-201ENST00000392185 NRKQ7Z2Y5 1582 aa18.92■□□□□ 0.62
SNX9-201ENST00000392185 ZFYVE27Q5T4F4 411 aa18.92■□□□□ 0.62
SNX9-201ENST00000392185 KCNJ14Q9UNX9 436 aa18.92■□□□□ 0.62
SNX9-201ENST00000392185 BAG6P46379 1132 aa18.92■□□□□ 0.62
SNX9-201ENST00000392185 PPARAQ07869 468 aa18.92■□□□□ 0.62
SNX9-201ENST00000392185 TOP1P11387 765 aaKnown RBP18.91■□□□□ 0.62
SNX9-201ENST00000392185 PUS7LQ9H0K6 701 aaKnown RBP18.91■□□□□ 0.62
SNX9-201ENST00000392185 ZNF174Q15697 407 aa18.91■□□□□ 0.62
SNX9-201ENST00000392185 NLGN1Q8N2Q7 840 aa18.91■□□□□ 0.62
SNX9-201ENST00000392185 TRMT1Q9NXH9 659 aaKnown RBP18.91■□□□□ 0.62
SNX9-201ENST00000392185 TYRO3Q06418 890 aa18.91■□□□□ 0.62
SNX9-201ENST00000392185 EPB41L2O43491 1005 aaKnown RBP18.9■□□□□ 0.62
SNX9-201ENST00000392185 BRD1O95696 1058 aa18.9■□□□□ 0.62
SNX9-201ENST00000392185 CALML3P27482 149 aa18.9■□□□□ 0.62
SNX9-201ENST00000392185 KRT2P35908 639 aa18.9■□□□□ 0.62
SNX9-201ENST00000392185 ZYXQ15942 572 aaKnown RBP18.9■□□□□ 0.62
SNX9-201ENST00000392185 ENOX2Q16206 610 aaKnown RBP18.9■□□□□ 0.62
SNX9-201ENST00000392185 BRAPQ7Z569 592 aa18.9■□□□□ 0.62
SNX9-201ENST00000392185 RRP36Q96EU6 259 aaKnown RBP18.9■□□□□ 0.62
SNX9-201ENST00000392185 GPR101Q96P66 508 aaPredicted RBP18.9■□□□□ 0.62
SNX9-201ENST00000392185 CD163L1Q9NR16 1453 aa18.9■□□□□ 0.62
SNX9-201ENST00000392185 PRKAB2O43741 272 aa18.9■□□□□ 0.62
SNX9-201ENST00000392185 TMC6Q7Z403 805 aa18.9■□□□□ 0.62
SNX9-201ENST00000392185 CAGE1Q8TC20 777 aa18.9■□□□□ 0.62
SNX9-201ENST00000392185 GTF3C6Q969F1 213 aa18.9■□□□□ 0.62
SNX9-201ENST00000392185 PPLO60437 1756 aa18.9■□□□□ 0.62
SNX9-201ENST00000392185 SPECC1Q5M775 1068 aa18.9■□□□□ 0.62
SNX9-201ENST00000392185 SSH2Q76I76 1423 aa18.9■□□□□ 0.62
SNX9-201ENST00000392185 SAMM50Q9Y512 469 aa18.9■□□□□ 0.62
SNX9-201ENST00000392185 PPIP5K2O43314 1243 aa18.89■□□□□ 0.62
SNX9-201ENST00000392185 LMOD1P29536 600 aaPredicted RBP18.89■□□□□ 0.62
SNX9-201ENST00000392185 ALDH1B1P30837 517 aa18.89■□□□□ 0.62
SNX9-201ENST00000392185 TNIP1Q15025 636 aa18.89■□□□□ 0.62
SNX9-201ENST00000392185 KRT40Q6A162 431 aa18.89■□□□□ 0.62
SNX9-201ENST00000392185 GOLGA6L1Q8N7Z2 621 aa18.89■□□□□ 0.62
SNX9-201ENST00000392185 FAM200AQ8TCP9 573 aa18.89■□□□□ 0.62
SNX9-201ENST00000392185 LLPHQ9BRT6 129 aaKnown RBP18.89■□□□□ 0.62
SNX9-201ENST00000392185 C6orf50Q9HD87 102 aa18.89■□□□□ 0.62
SNX9-201ENST00000392185 M0R2C6 588 aa18.89■□□□□ 0.61
SNX9-201ENST00000392185 PARP1P09874 1014 aaKnown RBP18.89■□□□□ 0.61
SNX9-201ENST00000392185 C2CD5Q86YS7 1000 aa18.89■□□□□ 0.61
SNX9-201ENST00000392185 RXRBP28702 533 aa18.89■□□□□ 0.61
SNX9-201ENST00000392185 AOPEPQ8N6M6 819 aa18.89■□□□□ 0.61
SNX9-201ENST00000392185 RPS6KA4O75676 772 aa18.89■□□□□ 0.61
SNX9-201ENST00000392185 DYNLL1P63167 89 aaKnown RBP18.89■□□□□ 0.61
SNX9-201ENST00000392185 UBE3CQ15386 1083 aa18.89■□□□□ 0.61
SNX9-201ENST00000392185 RASGRF1Q13972 1273 aa18.88■□□□□ 0.61
SNX9-201ENST00000392185 DEXIO95424 95 aa18.88■□□□□ 0.61
SNX9-201ENST00000392185 STAT6P42226 847 aa18.88■□□□□ 0.61
SNX9-201ENST00000392185 VWA3AA6NCI4 1184 aa18.88■□□□□ 0.61
SNX9-201ENST00000392185 RBM10P98175 930 aaKnown RBP18.88■□□□□ 0.61
SNX9-201ENST00000392185 ZNF654Q8IZM8 581 aa18.88■□□□□ 0.61
SNX9-201ENST00000392185 MARCH10Q8NA82 808 aaPredicted RBP18.88■□□□□ 0.61
SNX9-201ENST00000392185 ISCA1Q9BUE6 129 aa18.88■□□□□ 0.61
SNX9-201ENST00000392185 PDCL3Q9H2J4 239 aa18.88■□□□□ 0.61
SNX9-201ENST00000392185 LMBRD1Q9NUN5 540 aa18.87■□□□□ 0.61
SNX9-201ENST00000392185 BMP15O95972 392 aa18.87■□□□□ 0.61
SNX9-201ENST00000392185 LETM2Q2VYF4 491 aa18.87■□□□□ 0.61
SNX9-201ENST00000392185 CCDC112Q8NEF3 446 aa18.87■□□□□ 0.61
SNX9-201ENST00000392185 LEO1Q8WVC0 666 aaPredicted RBP18.87■□□□□ 0.61
SNX9-201ENST00000392185 USP40Q9NVE5 1235 aa18.87■□□□□ 0.61
SNX9-201ENST00000392185 VPS54Q9P1Q0 977 aa18.87■□□□□ 0.61
SNX9-201ENST00000392185 PRKCSHP14314 528 aaPredicted RBP18.87■□□□□ 0.61
SNX9-201ENST00000392185 PDE6BP35913 854 aa18.87■□□□□ 0.61
SNX9-201ENST00000392185 TBC1D22AQ8WUA7 517 aa18.87■□□□□ 0.61
SNX9-201ENST00000392185 SOS2Q07890 1332 aaPredicted RBP18.87■□□□□ 0.61
SNX9-201ENST00000392185 MCAMP43121 646 aa18.86■□□□□ 0.61
SNX9-201ENST00000392185 PIH1D3Q9NQM4 214 aaKnown RBP18.86■□□□□ 0.61
SNX9-201ENST00000392185 ATP2B4P23634 1241 aa18.86■□□□□ 0.61
SNX9-201ENST00000392185 STX17P56962 302 aa18.86■□□□□ 0.61
SNX9-201ENST00000392185 ANO1Q5XXA6 986 aa18.86■□□□□ 0.61
SNX9-201ENST00000392185 PIK3AP1Q6ZUJ8 805 aa18.86■□□□□ 0.61
SNX9-201ENST00000392185 SMARCC2Q8TAQ2 1214 aa18.86■□□□□ 0.61
SNX9-201ENST00000392185 UIMC1Q96RL1 719 aa18.86■□□□□ 0.61
SNX9-201ENST00000392185 RRAGBQ5VZM2 374 aa18.86■□□□□ 0.61
SNX9-201ENST00000392185 KANK3Q6NY19 840 aa18.86■□□□□ 0.61
SNX9-201ENST00000392185 ERCC4Q92889 916 aaPredicted RBP18.86■□□□□ 0.61
SNX9-201ENST00000392185 TNKSO95271 1327 aa18.86■□□□□ 0.61
SNX9-201ENST00000392185 ECM2O94769 699 aaPredicted RBP18.85■□□□□ 0.61
SNX9-201ENST00000392185 IBSPP21815 317 aaPredicted RBP18.85■□□□□ 0.61
SNX9-201ENST00000392185 ADD2P35612 726 aa18.85■□□□□ 0.61
SNX9-201ENST00000392185 MTIF2P46199 727 aaKnown RBP18.85■□□□□ 0.61
SNX9-201ENST00000392185 LUZP1Q86V48 1076 aa18.85■□□□□ 0.61
SNX9-201ENST00000392185 SEPT11Q9NVA2 429 aaKnown RBP18.85■□□□□ 0.61
SNX9-201ENST00000392185 MTMR6Q9Y217 621 aa18.85■□□□□ 0.61
SNX9-201ENST00000392185 LIG1P18858 919 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms