RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 IKBKBO14920 756 aa12.39□□□□□ -0.43
ABCF1-202ENST00000376545 U2AF2P26368 475 aaKnown RBP eCLIP12.39□□□□□ -0.433e-7■■■□□ 18.3
ABCF1-202ENST00000376545 TAF7LQ5H9L4 462 aa12.39□□□□□ -0.43
ABCF1-202ENST00000376545 PDCL2Q8N4E4 241 aa12.39□□□□□ -0.43
ABCF1-202ENST00000376545 MROH7-TTC4A0A0A0MT08 1334 aa12.39□□□□□ -0.43
ABCF1-202ENST00000376545 ANKRD18BA2A2Z9 1011 aa12.38□□□□□ -0.43
ABCF1-202ENST00000376545 CPLX1O14810 134 aa12.38□□□□□ -0.43
ABCF1-202ENST00000376545 PFKFB1P16118 471 aa12.38□□□□□ -0.43
ABCF1-202ENST00000376545 SLC9C2Q5TAH2 1124 aa12.38□□□□□ -0.43
ABCF1-202ENST00000376545 CEP135Q66GS9 1140 aa12.38□□□□□ -0.43
ABCF1-202ENST00000376545 APOA5Q6Q788 366 aa12.38□□□□□ -0.43
ABCF1-202ENST00000376545 CCAR2Q8N163 923 aaKnown RBP12.38□□□□□ -0.43
ABCF1-202ENST00000376545 ARID3AQ99856 593 aa12.38□□□□□ -0.43
ABCF1-202ENST00000376545 HSD3B7Q9H2F3 369 aa12.38□□□□□ -0.43
ABCF1-202ENST00000376545 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.38□□□□□ -0.43
ABCF1-202ENST00000376545 FAM217BQ9NTX9 383 aaPredicted RBP12.38□□□□□ -0.43
ABCF1-202ENST00000376545 COL22A1Q8NFW1 1626 aaPredicted RBP12.38□□□□□ -0.43
ABCF1-202ENST00000376545 SLC3A2P08195 630 aaKnown RBP12.38□□□□□ -0.43
ABCF1-202ENST00000376545 CYP19A1P11511 503 aaPredicted RBP12.38□□□□□ -0.43
ABCF1-202ENST00000376545 SF3A1Q15459 793 aaKnown RBP12.38□□□□□ -0.43
ABCF1-202ENST00000376545 PPP4R3BQ5MIZ7 849 aa12.38□□□□□ -0.43
ABCF1-202ENST00000376545 SYNE3Q6ZMZ3 975 aa12.38□□□□□ -0.43
ABCF1-202ENST00000376545 ELOA2Q8IYF1 753 aaPredicted RBP12.38□□□□□ -0.43
ABCF1-202ENST00000376545 SLC4A9Q96Q91 983 aa12.38□□□□□ -0.43
ABCF1-202ENST00000376545 RREB1Q92766 1687 aa12.38□□□□□ -0.43
ABCF1-202ENST00000376545 STK36Q9NRP7 1315 aa12.37□□□□□ -0.43
ABCF1-202ENST00000376545 CDKL5O76039 1030 aa12.37□□□□□ -0.43
ABCF1-202ENST00000376545 CDC27P30260 824 aa12.37□□□□□ -0.43
ABCF1-202ENST00000376545 DHX8Q14562 1220 aaKnown RBP12.37□□□□□ -0.43
ABCF1-202ENST00000376545 CCDC85AQ96PX6 553 aaPredicted RBP12.37□□□□□ -0.43
ABCF1-202ENST00000376545 STRBPQ96SI9 672 aaKnown RBP12.37□□□□□ -0.43
ABCF1-202ENST00000376545 LAMB2P55268 1798 aa12.37□□□□□ -0.43
ABCF1-202ENST00000376545 ZNF532Q9HCE3 1301 aa12.37□□□□□ -0.43
ABCF1-202ENST00000376545 ERVV-1B6SEH8 477 aa12.37□□□□□ -0.43
ABCF1-202ENST00000376545 UQCRFS1P1P0C7P4 283 aa12.37□□□□□ -0.43
ABCF1-202ENST00000376545 LIFRP42702 1097 aa12.37□□□□□ -0.43
ABCF1-202ENST00000376545 TRDNQ13061 729 aa12.37□□□□□ -0.43
ABCF1-202ENST00000376545 CCDC102BQ68D86 513 aa12.37□□□□□ -0.43
ABCF1-202ENST00000376545 LY9Q9HBG7 655 aa12.37□□□□□ -0.43
ABCF1-202ENST00000376545 PHLPP1O60346 1717 aa12.37□□□□□ -0.43
ABCF1-202ENST00000376545 PDE8AO60658 829 aa12.37□□□□□ -0.43
ABCF1-202ENST00000376545 PDE6AP16499 860 aa12.37□□□□□ -0.43
ABCF1-202ENST00000376545 METAP2P50579 478 aaKnown RBP eCLIP12.37□□□□□ -0.438e-6■■□□□ 13.7
ABCF1-202ENST00000376545 KRT40Q6A162 431 aa12.37□□□□□ -0.43
ABCF1-202ENST00000376545 VPS37DQ86XT2 251 aa12.37□□□□□ -0.43
ABCF1-202ENST00000376545 AK7Q96M32 723 aa12.37□□□□□ -0.43
ABCF1-202ENST00000376545 ALG1Q9BT22 464 aa12.37□□□□□ -0.43
ABCF1-202ENST00000376545 SLAIN2Q9P270 581 aa12.37□□□□□ -0.43
ABCF1-202ENST00000376545 CICQ96RK0 1608 aaPredicted RBP12.36□□□□□ -0.43
ABCF1-202ENST00000376545 IRS4O14654 1257 aaPredicted RBP12.36□□□□□ -0.43
ABCF1-202ENST00000376545 RESP18Q5W5W9 173 aa12.36□□□□□ -0.43
ABCF1-202ENST00000376545 SHC4Q6S5L8 630 aa12.36□□□□□ -0.43
ABCF1-202ENST00000376545 CCDC112Q8NEF3 446 aa12.36□□□□□ -0.43
ABCF1-202ENST00000376545 XPO4Q9C0E2 1151 aaKnown RBP12.36□□□□□ -0.43
ABCF1-202ENST00000376545 SENP2Q9HC62 589 aa12.36□□□□□ -0.43
ABCF1-202ENST00000376545 PRDM4Q9UKN5 801 aa12.36□□□□□ -0.43
ABCF1-202ENST00000376545 RANBP6O60518 1105 aaKnown RBP12.36□□□□□ -0.43
ABCF1-202ENST00000376545 ARMCX5Q6P1M9 558 aa12.36□□□□□ -0.43
ABCF1-202ENST00000376545 ZNF34Q8IZ26 560 aa12.36□□□□□ -0.43
ABCF1-202ENST00000376545 CCDC150Q8NCX0 1101 aa12.36□□□□□ -0.43
ABCF1-202ENST00000376545 AIFM3Q96NN9 605 aa12.36□□□□□ -0.43
ABCF1-202ENST00000376545 MROH5Q6ZUA9 1318 aa12.36□□□□□ -0.43
ABCF1-202ENST00000376545 PATL2C9JE40 543 aaKnown RBP12.35□□□□□ -0.43
ABCF1-202ENST00000376545 PHKA1P46020 1223 aa12.35□□□□□ -0.43
ABCF1-202ENST00000376545 PTPN14Q15678 1187 aa12.35□□□□□ -0.43
ABCF1-202ENST00000376545 FILIP1Q7Z7B0 1213 aa12.35□□□□□ -0.43
ABCF1-202ENST00000376545 RAB11FIP4Q86YS3 637 aa12.35□□□□□ -0.43
ABCF1-202ENST00000376545 LPIN2Q92539 896 aa12.35□□□□□ -0.43
ABCF1-202ENST00000376545 FEZ1Q99689 392 aa12.35□□□□□ -0.43
ABCF1-202ENST00000376545 CNNM1Q9NRU3 951 aa12.35□□□□□ -0.43
ABCF1-202ENST00000376545 WWC3Q9ULE0 1092 aa12.35□□□□□ -0.43
ABCF1-202ENST00000376545 TACC3Q9Y6A5 838 aa12.35□□□□□ -0.43
ABCF1-202ENST00000376545 KIF2AO00139 706 aaPredicted RBP12.35□□□□□ -0.43
ABCF1-202ENST00000376545 ZSCAN20P17040 1043 aaPredicted RBP12.35□□□□□ -0.43
ABCF1-202ENST00000376545 E4F1Q66K89 784 aaPredicted RBP12.35□□□□□ -0.43
ABCF1-202ENST00000376545 UBN2Q6ZU65 1347 aa12.35□□□□□ -0.43
ABCF1-202ENST00000376545 COL14A1Q05707 1796 aaKnown RBP12.35□□□□□ -0.43
ABCF1-202ENST00000376545 PSDA5PKW4 1024 aaPredicted RBP12.35□□□□□ -0.43
ABCF1-202ENST00000376545 PUM3Q15397 648 aaKnown RBP12.35□□□□□ -0.43
ABCF1-202ENST00000376545 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.35□□□□□ -0.43
ABCF1-202ENST00000376545 EPB41L4AQ9HCS5 686 aaPredicted RBP12.35□□□□□ -0.43
ABCF1-202ENST00000376545 B4E1Z4 1266 aa12.34□□□□□ -0.43
ABCF1-202ENST00000376545 MYO1BO43795 1136 aa12.34□□□□□ -0.43
ABCF1-202ENST00000376545 SYKP43405 635 aa12.34□□□□□ -0.43
ABCF1-202ENST00000376545 UTP14CQ5TAP6 766 aaKnown RBP12.34□□□□□ -0.43
ABCF1-202ENST00000376545 JMYQ8N9B5 988 aa12.34□□□□□ -0.43
ABCF1-202ENST00000376545 BBXQ8WY36 941 aaPredicted RBP12.34□□□□□ -0.43
ABCF1-202ENST00000376545 MTA3Q9BTC8 594 aa12.34□□□□□ -0.43
ABCF1-202ENST00000376545 STRN4Q9NRL3 753 aa12.34□□□□□ -0.43
ABCF1-202ENST00000376545 IFNKQ9P0W0 207 aa12.34□□□□□ -0.43
ABCF1-202ENST00000376545 A0A1B0GUL6 1792 aa12.34□□□□□ -0.43
ABCF1-202ENST00000376545 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.34□□□□□ -0.43
ABCF1-202ENST00000376545 ZBTB43O43298 467 aa12.34□□□□□ -0.43
ABCF1-202ENST00000376545 FMNL1O95466 1100 aaPredicted RBP12.34□□□□□ -0.43
ABCF1-202ENST00000376545 GPTP24298 496 aa12.34□□□□□ -0.43
ABCF1-202ENST00000376545 EVA1CP58658 441 aa12.34□□□□□ -0.43
ABCF1-202ENST00000376545 TBC1D2BQ9UPU7 963 aa12.34□□□□□ -0.43
ABCF1-202ENST00000376545 CUTAO60888 179 aa12.33□□□□□ -0.44
ABCF1-202ENST00000376545 MDM2Q00987 491 aaPredicted RBP12.33□□□□□ -0.44
ABCF1-202ENST00000376545 CPLX2Q6PUV4 134 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms