RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 PHKBQ93100 1093 aa16.84■□□□□ 0.29
MSH5-201ENST00000375703 TIGD1Q96MW7 591 aa16.84■□□□□ 0.29
MSH5-201ENST00000375703 KCND1Q9NSA2 647 aa16.84■□□□□ 0.29
MSH5-201ENST00000375703 TBC1D2BQ9UPU7 963 aa16.84■□□□□ 0.29
MSH5-201ENST00000375703 IRS4O14654 1257 aaPredicted RBP16.84■□□□□ 0.29
MSH5-201ENST00000375703 PDE8BO95263 885 aa16.84■□□□□ 0.29
MSH5-201ENST00000375703 CDC27P30260 824 aa16.84■□□□□ 0.29
MSH5-201ENST00000375703 APOA5Q6Q788 366 aa16.84■□□□□ 0.29
MSH5-201ENST00000375703 PPP6R2O75170 966 aa16.83■□□□□ 0.29
MSH5-201ENST00000375703 NCAPHQ15003 741 aa16.83■□□□□ 0.29
MSH5-201ENST00000375703 CCDC102BQ68D86 513 aa16.83■□□□□ 0.29
MSH5-201ENST00000375703 NFXL1Q6ZNB6 911 aa16.83■□□□□ 0.29
MSH5-201ENST00000375703 MICU3Q86XE3 530 aa16.83■□□□□ 0.29
MSH5-201ENST00000375703 VGLL2Q8N8G2 317 aa16.83■□□□□ 0.29
MSH5-201ENST00000375703 JMYQ8N9B5 988 aa16.83■□□□□ 0.29
MSH5-201ENST00000375703 TMEM87BQ96K49 555 aa16.83■□□□□ 0.29
MSH5-201ENST00000375703 SENP2Q9HC62 589 aa16.83■□□□□ 0.29
MSH5-201ENST00000375703 TRMT112Q9UI30 125 aaKnown RBP16.83■□□□□ 0.29
MSH5-201ENST00000375703 ZBTB43O43298 467 aa16.83■□□□□ 0.28
MSH5-201ENST00000375703 PDE6AP16499 860 aa16.83■□□□□ 0.28
MSH5-201ENST00000375703 KIF18AQ8NI77 898 aa16.83■□□□□ 0.28
MSH5-201ENST00000375703 IGDCC4Q8TDY8 1250 aa16.83■□□□□ 0.28
MSH5-201ENST00000375703 FEZ1Q99689 392 aa16.83■□□□□ 0.28
MSH5-201ENST00000375703 BCL11BQ9C0K0 894 aaPredicted RBP16.83■□□□□ 0.28
MSH5-201ENST00000375703 IARSP41252 1262 aaKnown RBP16.83■□□□□ 0.28
MSH5-201ENST00000375703 PHKA1P46020 1223 aa16.83■□□□□ 0.28
MSH5-201ENST00000375703 CCDC150Q8NCX0 1101 aa16.83■□□□□ 0.28
MSH5-201ENST00000375703 AIDAQ96BJ3 306 aa16.83■□□□□ 0.28
MSH5-201ENST00000375703 CGNQ9P2M7 1197 aaKnown RBP16.83■□□□□ 0.28
MSH5-201ENST00000375703 MROH7-TTC4A0A0A0MT08 1334 aa16.82■□□□□ 0.28
MSH5-201ENST00000375703 LMOD1P29536 600 aaPredicted RBP16.82■□□□□ 0.28
MSH5-201ENST00000375703 TRIM29Q14134 588 aa16.82■□□□□ 0.28
MSH5-201ENST00000375703 ARMCX5Q6P1M9 558 aa16.82■□□□□ 0.28
MSH5-201ENST00000375703 STRBPQ96SI9 672 aaKnown RBP16.82■□□□□ 0.28
MSH5-201ENST00000375703 WWC3Q9ULE0 1092 aa16.82■□□□□ 0.28
MSH5-201ENST00000375703 IKBKBO14920 756 aa16.82■□□□□ 0.28
MSH5-201ENST00000375703 UQCRFS1P1P0C7P4 283 aa16.82■□□□□ 0.28
MSH5-201ENST00000375703 ZSCAN20P17040 1043 aaPredicted RBP16.82■□□□□ 0.28
MSH5-201ENST00000375703 SFPQP23246 707 aaKnown RBP eCLIP16.82■□□□□ 0.28
MSH5-201ENST00000375703 PTPAQ15257 358 aa16.82■□□□□ 0.28
MSH5-201ENST00000375703 SHC4Q6S5L8 630 aa16.82■□□□□ 0.28
MSH5-201ENST00000375703 INCENPQ9NQS7 918 aa16.82■□□□□ 0.28
MSH5-201ENST00000375703 PRDM4Q9UKN5 801 aa16.82■□□□□ 0.28
MSH5-201ENST00000375703 HPSEQ9Y251 543 aa16.82■□□□□ 0.28
MSH5-201ENST00000375703 SOS2Q07890 1332 aaPredicted RBP16.81■□□□□ 0.28
MSH5-201ENST00000375703 KIF2AO00139 706 aaPredicted RBP16.81■□□□□ 0.28
MSH5-201ENST00000375703 FANCCQ00597 558 aa16.81■□□□□ 0.28
MSH5-201ENST00000375703 TMEM67Q5HYA8 995 aa16.81■□□□□ 0.28
MSH5-201ENST00000375703 TUBE1Q9UJT0 475 aa16.81■□□□□ 0.28
MSH5-201ENST00000375703 TCRBV5S4A2TA0A5A2 114 aa16.81■□□□□ 0.28
MSH5-201ENST00000375703 GOLGA8AA7E2F4 631 aa16.81■□□□□ 0.28
MSH5-201ENST00000375703 PDE8AO60658 829 aa16.81■□□□□ 0.28
MSH5-201ENST00000375703 ARID4AP29374 1257 aaPredicted RBP16.81■□□□□ 0.28
MSH5-201ENST00000375703 DHX8Q14562 1220 aaKnown RBP16.81■□□□□ 0.28
MSH5-201ENST00000375703 NTRK3Q16288 839 aa16.81■□□□□ 0.28
MSH5-201ENST00000375703 MAP3K14Q99558 947 aa16.81■□□□□ 0.28
MSH5-201ENST00000375703 ZNF215Q9UL58 517 aaPredicted RBP16.81■□□□□ 0.28
MSH5-201ENST00000375703 PATL2C9JE40 543 aaKnown RBP16.8■□□□□ 0.28
MSH5-201ENST00000375703 NRDCO43847 1150 aa16.8■□□□□ 0.28
MSH5-201ENST00000375703 E4F1Q66K89 784 aaPredicted RBP16.8■□□□□ 0.28
MSH5-201ENST00000375703 HELBQ8NG08 1087 aaPredicted RBP16.8■□□□□ 0.28
MSH5-201ENST00000375703 CLIC6Q96NY7 704 aa16.8■□□□□ 0.28
MSH5-201ENST00000375703 MYL10Q9BUA6 226 aa16.8■□□□□ 0.28
MSH5-201ENST00000375703 LY9Q9HBG7 655 aa16.8■□□□□ 0.28
MSH5-201ENST00000375703 ATRNO75882 1429 aa16.8■□□□□ 0.28
MSH5-201ENST00000375703 ALX1Q15699 326 aa16.8■□□□□ 0.28
MSH5-201ENST00000375703 SGMS1Q86VZ5 419 aa16.8■□□□□ 0.28
MSH5-201ENST00000375703 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.8■□□□□ 0.28
MSH5-201ENST00000375703 FAM217BQ9NTX9 383 aaPredicted RBP16.8■□□□□ 0.28
MSH5-201ENST00000375703 SSRP1Q08945 709 aaKnown RBP16.79■□□□□ 0.28
MSH5-201ENST00000375703 PNOCQ13519 176 aa16.79■□□□□ 0.28
MSH5-201ENST00000375703 LPIN2Q92539 896 aa16.79■□□□□ 0.28
MSH5-201ENST00000375703 OGFRQ9NZT2 677 aa16.79■□□□□ 0.28
MSH5-201ENST00000375703 ZSWIM5Q9P217 1185 aa16.79■□□□□ 0.28
MSH5-201ENST00000375703 SLAIN2Q9P270 581 aa16.79■□□□□ 0.28
MSH5-201ENST00000375703 SLC12A7Q9Y666 1083 aa16.79■□□□□ 0.28
MSH5-201ENST00000375703 IFIT3O14879 490 aaKnown RBP16.79■□□□□ 0.28
MSH5-201ENST00000375703 RANBP6O60518 1105 aaKnown RBP16.79■□□□□ 0.28
MSH5-201ENST00000375703 ATP1A3P13637 1013 aa16.79■□□□□ 0.28
MSH5-201ENST00000375703 DMTNQ08495 405 aa16.79■□□□□ 0.28
MSH5-201ENST00000375703 RESP18Q5W5W9 173 aa16.79■□□□□ 0.28
MSH5-201ENST00000375703 IFNL3Q8IZI9 196 aa16.79■□□□□ 0.28
MSH5-201ENST00000375703 SLC26A6Q9BXS9 759 aa16.79■□□□□ 0.28
MSH5-201ENST00000375703 NAPBQ9H115 298 aa16.79■□□□□ 0.28
MSH5-201ENST00000375703 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.79■□□□□ 0.28
MSH5-201ENST00000375703 FAM237AA0A1B0GTK4 181 aa16.78■□□□□ 0.28
MSH5-201ENST00000375703 PSDA5PKW4 1024 aaPredicted RBP16.78■□□□□ 0.28
MSH5-201ENST00000375703 CUTAO60888 179 aa16.78■□□□□ 0.28
MSH5-201ENST00000375703 C4AP0C0L4 1744 aa16.78■□□□□ 0.28
MSH5-201ENST00000375703 C4BP0C0L5 1744 aa16.78■□□□□ 0.28
MSH5-201ENST00000375703 CYP19A1P11511 503 aaPredicted RBP16.78■□□□□ 0.28
MSH5-201ENST00000375703 LIFRP42702 1097 aa16.78■□□□□ 0.28
MSH5-201ENST00000375703 CTDSPL2Q05D32 466 aa16.78■□□□□ 0.28
MSH5-201ENST00000375703 PUM3Q15397 648 aaKnown RBP16.78■□□□□ 0.28
MSH5-201ENST00000375703 AKAP11Q9UKA4 1901 aa16.78■□□□□ 0.28
MSH5-201ENST00000375703 UBASH3AP57075 661 aa16.78■□□□□ 0.28
MSH5-201ENST00000375703 ERO1AQ96HE7 468 aa16.78■□□□□ 0.28
MSH5-201ENST00000375703 PPP1R13BQ96KQ4 1090 aa16.78■□□□□ 0.28
MSH5-201ENST00000375703 HSD3B7Q9H2F3 369 aa16.78■□□□□ 0.28
MSH5-201ENST00000375703 UBN2Q6ZU65 1347 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms