RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 MS4A4AQ96JQ5 239 aa17.64■□□□□ 0.41
NELFE-201ENST00000375425 HPS5Q9UPZ3 1129 aa17.64■□□□□ 0.41
NELFE-201ENST00000375425 ZBTB22O15209 634 aa17.63■□□□□ 0.41
NELFE-201ENST00000375425 MIGA2Q7L4E1 593 aa17.63■□□□□ 0.41
NELFE-201ENST00000375425 TMEM57Q8N5G2 664 aa17.63■□□□□ 0.41
NELFE-201ENST00000375425 FAM151AQ8WW52 585 aa17.63■□□□□ 0.41
NELFE-201ENST00000375425 HOOK2Q96ED9 719 aa17.63■□□□□ 0.41
NELFE-201ENST00000375425 USP40Q9NVE5 1235 aa17.63■□□□□ 0.41
NELFE-201ENST00000375425 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.63■□□□□ 0.41
NELFE-201ENST00000375425 CENPFP49454 3210 aa17.62■□□□□ 0.41
NELFE-201ENST00000375425 PNMA6EA0A0J9YXQ4 647 aa17.62■□□□□ 0.41
NELFE-201ENST00000375425 TCP10Q12799 353 aa17.62■□□□□ 0.41
NELFE-201ENST00000375425 RASGRF1Q13972 1273 aa17.62■□□□□ 0.41
NELFE-201ENST00000375425 ZGPATQ8N5A5 531 aaKnown RBP17.62■□□□□ 0.41
NELFE-201ENST00000375425 ZKSCAN4Q969J2 545 aaPredicted RBP17.62■□□□□ 0.41
NELFE-201ENST00000375425 OTUD5Q96G74 571 aa17.62■□□□□ 0.41
NELFE-201ENST00000375425 NEUROD6Q96NK8 337 aa17.62■□□□□ 0.41
NELFE-201ENST00000375425 WRNIP1Q96S55 665 aa17.62■□□□□ 0.41
NELFE-201ENST00000375425 ABCF2Q9UG63 623 aa17.62■□□□□ 0.41
NELFE-201ENST00000375425 NFIAQ12857 509 aa17.61■□□□□ 0.41
NELFE-201ENST00000375425 G3BP1Q13283 466 aaKnown RBP eCLIP17.61■□□□□ 0.418e-8■■■□□ 18.4
NELFE-201ENST00000375425 CRHR2Q13324 411 aa17.61■□□□□ 0.41
NELFE-201ENST00000375425 DCAF15Q66K64 600 aa17.61■□□□□ 0.41
NELFE-201ENST00000375425 SNCAIPQ9Y6H5 919 aa17.61■□□□□ 0.41
NELFE-201ENST00000375425 CCL15-CCL14A0A0B4J2E2 113 aa17.6■□□□□ 0.41
NELFE-201ENST00000375425 GTF2A2P52657 109 aa17.6■□□□□ 0.41
NELFE-201ENST00000375425 SOX10P56693 466 aa17.6■□□□□ 0.41
NELFE-201ENST00000375425 MVPQ14764 893 aaKnown RBP17.6■□□□□ 0.41
NELFE-201ENST00000375425 CCL15Q16663 113 aa17.6■□□□□ 0.41
NELFE-201ENST00000375425 FBXO46Q6PJ61 603 aaPredicted RBP17.6■□□□□ 0.41
NELFE-201ENST00000375425 BRI3BPQ8WY22 251 aa17.6■□□□□ 0.41
NELFE-201ENST00000375425 ZNF341Q9BYN7 854 aa17.6■□□□□ 0.41
NELFE-201ENST00000375425 FAM198AQ9UFP1 575 aa17.6■□□□□ 0.41
NELFE-201ENST00000375425 HTTP42858 3142 aa17.6■□□□□ 0.41
NELFE-201ENST00000375425 SPDYE5A6NIY4 337 aa17.59■□□□□ 0.41
NELFE-201ENST00000375425 ERO1BQ86YB8 467 aa17.59■□□□□ 0.41
NELFE-201ENST00000375425 GORABQ5T7V8 394 aa17.58■□□□□ 0.41
NELFE-201ENST00000375425 SPTY2D1Q68D10 685 aaPredicted RBP17.58■□□□□ 0.41
NELFE-201ENST00000375425 DZIP1Q86YF9 867 aaKnown RBP17.58■□□□□ 0.41
NELFE-201ENST00000375425 ZFPM1Q8IX07 1006 aa17.58■□□□□ 0.41
NELFE-201ENST00000375425 FAM163AQ96GL9 167 aaPredicted RBP17.58■□□□□ 0.41
NELFE-201ENST00000375425 TRIM17Q9Y577 477 aa17.58■□□□□ 0.41
NELFE-201ENST00000375425 PDS5AQ29RF7 1337 aaKnown RBP17.58■□□□□ 0.4
NELFE-201ENST00000375425 RPAP1Q9BWH6 1393 aaPredicted RBP17.58■□□□□ 0.4
NELFE-201ENST00000375425 IRF6O14896 467 aa17.57■□□□□ 0.4
NELFE-201ENST00000375425 INPP5BP32019 993 aa17.57■□□□□ 0.4
NELFE-201ENST00000375425 FTSJ3Q8IY81 847 aaKnown RBP17.57■□□□□ 0.4
NELFE-201ENST00000375425 TNRC18O15417 2968 aaPredicted RBP17.57■□□□□ 0.4
NELFE-201ENST00000375425 GAKO14976 1311 aa17.56■□□□□ 0.4
NELFE-201ENST00000375425 ATP8B2P98198 1209 aa17.56■□□□□ 0.4
NELFE-201ENST00000375425 SP3Q02447 781 aa17.56■□□□□ 0.4
NELFE-201ENST00000375425 ERICH6Q7L0X2 663 aa17.56■□□□□ 0.4
NELFE-201ENST00000375425 OTOP1Q7RTM1 612 aa17.56■□□□□ 0.4
NELFE-201ENST00000375425 SLF2Q8IX21 1173 aa17.56■□□□□ 0.4
NELFE-201ENST00000375425 FAM43AQ8N2R8 423 aa17.56■□□□□ 0.4
NELFE-201ENST00000375425 CD99L2Q8TCZ2 262 aa17.56■□□□□ 0.4
NELFE-201ENST00000375425 ERO1AQ96HE7 468 aa17.56■□□□□ 0.4
NELFE-201ENST00000375425 IDI2Q9BXS1 227 aa17.56■□□□□ 0.4
NELFE-201ENST00000375425 HMG20BQ9P0W2 317 aa17.56■□□□□ 0.4
NELFE-201ENST00000375425 ZNF112Q9UJU3 913 aa17.56■□□□□ 0.4
NELFE-201ENST00000375425 CETPP11597 493 aa17.55■□□□□ 0.4
NELFE-201ENST00000375425 RGS3P49796 1198 aa17.55■□□□□ 0.4
NELFE-201ENST00000375425 PPATQ06203 517 aa17.55■□□□□ 0.4
NELFE-201ENST00000375425 PPIL2Q13356 520 aa17.55■□□□□ 0.4
NELFE-201ENST00000375425 POLA2Q14181 598 aa17.55■□□□□ 0.4
NELFE-201ENST00000375425 TAF1CQ15572 869 aaPredicted RBP17.55■□□□□ 0.4
NELFE-201ENST00000375425 SPATA5Q8NB90 893 aa17.55■□□□□ 0.4
NELFE-201ENST00000375425 C1orf115Q9H7X2 142 aa17.55■□□□□ 0.4
NELFE-201ENST00000375425 ZFYVE28Q9HCC9 887 aa17.55■□□□□ 0.4
NELFE-201ENST00000375425 OTOFQ9HC10 1997 aa17.55■□□□□ 0.4
NELFE-201ENST00000375425 MYH13Q9UKX3 1938 aa17.55■□□□□ 0.4
NELFE-201ENST00000375425 ZBTB7BO15156 539 aaPredicted RBP17.55■□□□□ 0.4
NELFE-201ENST00000375425 RLBP1P12271 317 aa17.55■□□□□ 0.4
NELFE-201ENST00000375425 MECOMQ03112 1051 aa17.55■□□□□ 0.4
NELFE-201ENST00000375425 SNAPC2Q13487 334 aa17.55■□□□□ 0.4
NELFE-201ENST00000375425 PI16Q6UXB8 463 aa17.55■□□□□ 0.4
NELFE-201ENST00000375425 TBC1D9Q6ZT07 1266 aa17.55■□□□□ 0.4
NELFE-201ENST00000375425 ITPRIPQ8IWB1 547 aa17.55■□□□□ 0.4
NELFE-201ENST00000375425 SSH3Q8TE77 659 aa17.55■□□□□ 0.4
NELFE-201ENST00000375425 BRCA2P51587 3418 aa17.54■□□□□ 0.4
NELFE-201ENST00000375425 BTBD19C9JJ37 291 aa17.54■□□□□ 0.4
NELFE-201ENST00000375425 ENTPD3O75355 529 aa17.54■□□□□ 0.4
NELFE-201ENST00000375425 ARID4AP29374 1257 aaPredicted RBP17.54■□□□□ 0.4
NELFE-201ENST00000375425 BTDP43251 543 aa17.54■□□□□ 0.4
NELFE-201ENST00000375425 ZSCAN29Q8IWY8 852 aaPredicted RBP17.54■□□□□ 0.4
NELFE-201ENST00000375425 ZNF384Q8TF68 577 aa17.54■□□□□ 0.4
NELFE-201ENST00000375425 EFCC1Q9HA90 598 aa17.54■□□□□ 0.4
NELFE-201ENST00000375425 MROH7-TTC4A0A0A0MT08 1334 aa17.53■□□□□ 0.4
NELFE-201ENST00000375425 ZBED9Q6R2W3 1325 aa17.53■□□□□ 0.4
NELFE-201ENST00000375425 GPR75-ASB3A0A0A6YYF3 556 aa17.53■□□□□ 0.4
NELFE-201ENST00000375425 SURF6O75683 361 aaKnown RBP17.53■□□□□ 0.4
NELFE-201ENST00000375425 WDHD1O75717 1129 aaPredicted RBP17.53■□□□□ 0.4
NELFE-201ENST00000375425 CAP1Q01518 475 aa17.53■□□□□ 0.4
NELFE-201ENST00000375425 OS9Q13438 667 aaPredicted RBP17.53■□□□□ 0.4
NELFE-201ENST00000375425 SH3BP5LQ7L8J4 393 aa17.53■□□□□ 0.4
NELFE-201ENST00000375425 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.53■□□□□ 0.4
NELFE-201ENST00000375425 GPR108Q9NPR9 543 aa17.53■□□□□ 0.4
NELFE-201ENST00000375425 MKI67P46013 3256 aaKnown RBP17.52■□□□□ 0.4
NELFE-201ENST00000375425 LAMB1P07942 1786 aa17.52■□□□□ 0.4
NELFE-201ENST00000375425 UQCRFS1P1P0C7P4 283 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms