RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 TTC22Q5TAA0 569 aa18.18■□□□□ 0.5
HSPG2-201ENST00000374673 ZSCAN25Q6NSZ9 544 aa18.18■□□□□ 0.5
HSPG2-201ENST00000374673 ADGRA1Q86SQ6 560 aa18.18■□□□□ 0.5
HSPG2-201ENST00000374673 DCPSQ96C86 337 aaKnown RBP18.18■□□□□ 0.5
HSPG2-201ENST00000374673 ZNF70Q9UC06 446 aaPredicted RBP18.18■□□□□ 0.5
HSPG2-201ENST00000374673 TCRBV5S4A2TA0A5A2 114 aa18.17■□□□□ 0.5
HSPG2-201ENST00000374673 UBE3CQ15386 1083 aa18.17■□□□□ 0.5
HSPG2-201ENST00000374673 LRRFIP1Q32MZ4 808 aaKnown RBP18.17■□□□□ 0.5
HSPG2-201ENST00000374673 MAP1SQ66K74 1059 aaPredicted RBP18.17■□□□□ 0.5
HSPG2-201ENST00000374673 APOBEC3FQ8IUX4 373 aaKnown RBP18.17■□□□□ 0.5
HSPG2-201ENST00000374673 CNTROBQ8N137 903 aa18.17■□□□□ 0.5
HSPG2-201ENST00000374673 ZNF532Q9HCE3 1301 aa18.17■□□□□ 0.5
HSPG2-201ENST00000374673 RFX7Q2KHR2 1363 aa18.17■□□□□ 0.5
HSPG2-201ENST00000374673 CLRN2A0PK11 232 aa18.16■□□□□ 0.5
HSPG2-201ENST00000374673 BAG3O95817 575 aa18.16■□□□□ 0.5
HSPG2-201ENST00000374673 ZFYP08048 801 aaPredicted RBP18.16■□□□□ 0.5
HSPG2-201ENST00000374673 PPP4CP60510 307 aa18.16■□□□□ 0.5
HSPG2-201ENST00000374673 FSTL1Q12841 308 aa18.16■□□□□ 0.5
HSPG2-201ENST00000374673 CDC42EP5Q6NZY7 148 aa18.16■□□□□ 0.5
HSPG2-201ENST00000374673 CDC37L1Q7L3B6 337 aa18.16■□□□□ 0.5
HSPG2-201ENST00000374673 TICAM2Q86XR7 235 aa18.16■□□□□ 0.5
HSPG2-201ENST00000374673 NOL10Q9BSC4 688 aaKnown RBP18.16■□□□□ 0.5
HSPG2-201ENST00000374673 FSD1Q9BTV5 496 aa18.16■□□□□ 0.5
HSPG2-201ENST00000374673 TRIM6-TRIM34B2RNG4 842 aa18.15■□□□□ 0.5
HSPG2-201ENST00000374673 GSPT1P15170 499 aaKnown RBP18.15■□□□□ 0.5
HSPG2-201ENST00000374673 RHBDL3P58872 404 aa18.15■□□□□ 0.5
HSPG2-201ENST00000374673 SKAP1Q86WV1 359 aa18.15■□□□□ 0.5
HSPG2-201ENST00000374673 CERS3Q8IU89 383 aa18.15■□□□□ 0.5
HSPG2-201ENST00000374673 SULF1Q8IWU6 871 aa18.15■□□□□ 0.5
HSPG2-201ENST00000374673 VEZTQ9HBM0 779 aa18.15■□□□□ 0.5
HSPG2-201ENST00000374673 USP40Q9NVE5 1235 aa18.15■□□□□ 0.5
HSPG2-201ENST00000374673 AATFQ9NY61 560 aaKnown RBP eCLIP18.15■□□□□ 0.5
HSPG2-201ENST00000374673 TMOD2Q9NZR1 351 aa18.15■□□□□ 0.5
HSPG2-201ENST00000374673 TRPM7Q96QT4 1865 aa18.15■□□□□ 0.5
HSPG2-201ENST00000374673 RNF113AO15541 343 aaKnown RBP18.14■□□□□ 0.49
HSPG2-201ENST00000374673 PLCG2P16885 1265 aa18.14■□□□□ 0.49
HSPG2-201ENST00000374673 TNFAIP1Q13829 316 aa18.14■□□□□ 0.49
HSPG2-201ENST00000374673 FKBP1CQ5VVH2 108 aa18.14■□□□□ 0.49
HSPG2-201ENST00000374673 KRT26Q7Z3Y9 468 aa18.14■□□□□ 0.49
HSPG2-201ENST00000374673 GLIS2Q9BZE0 524 aaPredicted RBP18.14■□□□□ 0.49
HSPG2-201ENST00000374673 ITGBL1O95965 494 aaPredicted RBP18.13■□□□□ 0.49
HSPG2-201ENST00000374673 CHGBP05060 677 aa18.13■□□□□ 0.49
HSPG2-201ENST00000374673 APPBP2Q92624 585 aa18.13■□□□□ 0.49
HSPG2-201ENST00000374673 RILPL2Q969X0 211 aa18.13■□□□□ 0.49
HSPG2-201ENST00000374673 RIOK1Q9BRS2 568 aaKnown RBP18.13■□□□□ 0.49
HSPG2-201ENST00000374673 IDI2Q9BXS1 227 aa18.13■□□□□ 0.49
HSPG2-201ENST00000374673 PPP2R3BQ9Y5P8 575 aa18.13■□□□□ 0.49
HSPG2-201ENST00000374673 ADM5C9JUS6 153 aa18.12■□□□□ 0.49
HSPG2-201ENST00000374673 TNNI2P48788 182 aa18.12■□□□□ 0.49
HSPG2-201ENST00000374673 RGS3P49796 1198 aa18.12■□□□□ 0.49
HSPG2-201ENST00000374673 CACNB3P54284 484 aa18.12■□□□□ 0.49
HSPG2-201ENST00000374673 DYNLL1P63167 89 aaKnown RBP18.12■□□□□ 0.49
HSPG2-201ENST00000374673 SLFNL1Q499Z3 407 aa18.12■□□□□ 0.49
HSPG2-201ENST00000374673 USP48Q86UV5 1035 aa18.12■□□□□ 0.49
HSPG2-201ENST00000374673 FAM83AQ86UY5 434 aa18.12■□□□□ 0.49
HSPG2-201ENST00000374673 MIGA1Q8NAN2 632 aa18.12■□□□□ 0.49
HSPG2-201ENST00000374673 PASKQ96RG2 1323 aa18.12■□□□□ 0.49
HSPG2-201ENST00000374673 MAGEB6P1A0A0J9YX57 407 aa18.11■□□□□ 0.49
HSPG2-201ENST00000374673 TCP10L2B9ZVM9 353 aa18.11■□□□□ 0.49
HSPG2-201ENST00000374673 NPM3O75607 178 aaKnown RBP18.11■□□□□ 0.49
HSPG2-201ENST00000374673 WDHD1O75717 1129 aaPredicted RBP18.11■□□□□ 0.49
HSPG2-201ENST00000374673 SDSP20132 328 aa18.11■□□□□ 0.49
HSPG2-201ENST00000374673 SH3RF3Q8TEJ3 882 aaPredicted RBP18.11■□□□□ 0.49
HSPG2-201ENST00000374673 DEFB129Q9H1M3 183 aa18.11■□□□□ 0.49
HSPG2-201ENST00000374673 SCAF8Q9UPN6 1271 aaKnown RBP18.11■□□□□ 0.49
HSPG2-201ENST00000374673 CNTNAP1P78357 1384 aa18.11■□□□□ 0.49
HSPG2-201ENST00000374673 RPAP1Q9BWH6 1393 aaPredicted RBP18.11■□□□□ 0.49
HSPG2-201ENST00000374673 NAV1Q8NEY1 1877 aa18.1■□□□□ 0.49
HSPG2-201ENST00000374673 ENTPD3O75355 529 aa18.1■□□□□ 0.49
HSPG2-201ENST00000374673 NFIAQ12857 509 aa18.1■□□□□ 0.49
HSPG2-201ENST00000374673 RASA3Q14644 834 aa18.1■□□□□ 0.49
HSPG2-201ENST00000374673 ZMYM1Q5SVZ6 1142 aa18.1■□□□□ 0.49
HSPG2-201ENST00000374673 TEX11Q8IYF3 940 aa18.1■□□□□ 0.49
HSPG2-201ENST00000374673 OSBP2Q969R2 916 aa18.1■□□□□ 0.49
HSPG2-201ENST00000374673 PUS7LQ9H0K6 701 aaKnown RBP18.1■□□□□ 0.49
HSPG2-201ENST00000374673 FAM198AQ9UFP1 575 aa18.1■□□□□ 0.49
HSPG2-201ENST00000374673 DDX60LQ5H9U9 1706 aaKnown RBP18.09■□□□□ 0.49
HSPG2-201ENST00000374673 COL2A1P02458 1487 aaPredicted RBP18.09■□□□□ 0.49
HSPG2-201ENST00000374673 TRAF5O00463 557 aa18.09■□□□□ 0.49
HSPG2-201ENST00000374673 BMP2KLQ5H9B9 411 aa18.09■□□□□ 0.49
HSPG2-201ENST00000374673 LCORLQ8N3X6 602 aa18.09■□□□□ 0.49
HSPG2-201ENST00000374673 FAM151AQ8WW52 585 aa18.09■□□□□ 0.49
HSPG2-201ENST00000374673 CDCA5Q96FF9 252 aa18.09■□□□□ 0.49
HSPG2-201ENST00000374673 DDX4Q9NQI0 724 aaKnown RBP18.09■□□□□ 0.49
HSPG2-201ENST00000374673 MYH1P12882 1939 aa18.09■□□□□ 0.49
HSPG2-201ENST00000374673 HIP1O00291 1037 aa18.08■□□□□ 0.48
HSPG2-201ENST00000374673 MBD4O95243 580 aa18.08■□□□□ 0.48
HSPG2-201ENST00000374673 AIDAQ96BJ3 306 aa18.08■□□□□ 0.48
HSPG2-201ENST00000374673 ARMT1Q9H993 441 aa18.08■□□□□ 0.48
HSPG2-201ENST00000374673 M0R2C6 588 aa18.07■□□□□ 0.48
HSPG2-201ENST00000374673 FMR1Q06787 632 aaKnown RBP eCLIP18.07■□□□□ 0.482e-6■□□□□ 10.3
HSPG2-201ENST00000374673 PICALMQ13492 652 aa18.07■□□□□ 0.48
HSPG2-201ENST00000374673 DLK2Q6UY11 383 aa18.07■□□□□ 0.48
HSPG2-201ENST00000374673 TGFBRAP1Q8WUH2 860 aa18.07■□□□□ 0.48
HSPG2-201ENST00000374673 TEPSINQ96N21 525 aa18.07■□□□□ 0.48
HSPG2-201ENST00000374673 CRNKL1Q9BZJ0 848 aaKnown RBP18.07■□□□□ 0.48
HSPG2-201ENST00000374673 TMEM39BQ9GZU3 492 aa18.07■□□□□ 0.48
HSPG2-201ENST00000374673 HELLSQ9NRZ9 838 aa18.07■□□□□ 0.48
HSPG2-201ENST00000374673 GTF3C3Q9Y5Q9 886 aa18.07■□□□□ 0.48
HSPG2-201ENST00000374673 ATRNL1Q5VV63 1379 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms