RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 ZNF532Q9HCE3 1301 aa18.77■□□□□ 0.6
PRPF38B-202ENST00000370022 TCRBV5S4A2TA0A5A2 114 aa18.77■□□□□ 0.6
PRPF38B-202ENST00000370022 POTEIP0CG38 1075 aa18.77■□□□□ 0.6
PRPF38B-202ENST00000370022 POTEJP0CG39 1038 aa18.77■□□□□ 0.6
PRPF38B-202ENST00000370022 PLCG2P16885 1265 aa18.77■□□□□ 0.6
PRPF38B-202ENST00000370022 PPP4CP60510 307 aa18.77■□□□□ 0.6
PRPF38B-202ENST00000370022 ANGEL2Q5VTE6 544 aaKnown RBP18.77■□□□□ 0.6
PRPF38B-202ENST00000370022 CHADLQ6NUI6 762 aa18.77■□□□□ 0.6
PRPF38B-202ENST00000370022 APOBEC3FQ8IUX4 373 aaKnown RBP18.77■□□□□ 0.6
PRPF38B-202ENST00000370022 TDRD3Q9H7E2 651 aaKnown RBP18.77■□□□□ 0.6
PRPF38B-202ENST00000370022 TMOD2Q9NZR1 351 aa18.77■□□□□ 0.6
PRPF38B-202ENST00000370022 MYH2Q9UKX2 1941 aa18.77■□□□□ 0.59
PRPF38B-202ENST00000370022 RNF113AO15541 343 aaKnown RBP18.76■□□□□ 0.59
PRPF38B-202ENST00000370022 TNFAIP1Q13829 316 aa18.76■□□□□ 0.59
PRPF38B-202ENST00000370022 FKBP1CQ5VVH2 108 aa18.76■□□□□ 0.59
PRPF38B-202ENST00000370022 ADGRA1Q86SQ6 560 aa18.76■□□□□ 0.59
PRPF38B-202ENST00000370022 SMC1BQ8NDV3 1235 aa18.76■□□□□ 0.59
PRPF38B-202ENST00000370022 RILPL2Q969X0 211 aa18.76■□□□□ 0.59
PRPF38B-202ENST00000370022 ZNF70Q9UC06 446 aaPredicted RBP18.76■□□□□ 0.59
PRPF38B-202ENST00000370022 GSPT1P15170 499 aaKnown RBP18.76■□□□□ 0.59
PRPF38B-202ENST00000370022 RGS3P49796 1198 aa18.76■□□□□ 0.59
PRPF38B-202ENST00000370022 CDC42EP5Q6NZY7 148 aa18.76■□□□□ 0.59
PRPF38B-202ENST00000370022 CDC37L1Q7L3B6 337 aa18.76■□□□□ 0.59
PRPF38B-202ENST00000370022 USP40Q9NVE5 1235 aa18.76■□□□□ 0.59
PRPF38B-202ENST00000370022 GTF3C3Q9Y5Q9 886 aa18.76■□□□□ 0.59
PRPF38B-202ENST00000370022 MYO5AQ9Y4I1 1855 aaKnown RBP18.75■□□□□ 0.59
PRPF38B-202ENST00000370022 ECM29Q5VYK3 1845 aa18.75■□□□□ 0.59
PRPF38B-202ENST00000370022 ASTN2O75129 1339 aaPredicted RBP18.75■□□□□ 0.59
PRPF38B-202ENST00000370022 SULF1Q8IWU6 871 aa18.75■□□□□ 0.59
PRPF38B-202ENST00000370022 AATFQ9NY61 560 aaKnown RBP eCLIP18.75■□□□□ 0.59
PRPF38B-202ENST00000370022 CLRN2A0PK11 232 aa18.74■□□□□ 0.59
PRPF38B-202ENST00000370022 TNNI2P48788 182 aa18.74■□□□□ 0.59
PRPF38B-202ENST00000370022 FSTL1Q12841 308 aa18.74■□□□□ 0.59
PRPF38B-202ENST00000370022 APPBP2Q92624 585 aa18.74■□□□□ 0.59
PRPF38B-202ENST00000370022 VEZTQ9HBM0 779 aa18.74■□□□□ 0.59
PRPF38B-202ENST00000370022 PPP2R3BQ9Y5P8 575 aa18.74■□□□□ 0.59
PRPF38B-202ENST00000370022 MAGEB6P1A0A0J9YX57 407 aa18.73■□□□□ 0.59
PRPF38B-202ENST00000370022 HIP1O00291 1037 aa18.73■□□□□ 0.59
PRPF38B-202ENST00000370022 SDSP20132 328 aa18.73■□□□□ 0.59
PRPF38B-202ENST00000370022 RHBDL3P58872 404 aa18.73■□□□□ 0.59
PRPF38B-202ENST00000370022 BMP2KLQ5H9B9 411 aa18.73■□□□□ 0.59
PRPF38B-202ENST00000370022 MAP1SQ66K74 1059 aaPredicted RBP18.73■□□□□ 0.59
PRPF38B-202ENST00000370022 KRT26Q7Z3Y9 468 aa18.73■□□□□ 0.59
PRPF38B-202ENST00000370022 IDI2Q9BXS1 227 aa18.73■□□□□ 0.59
PRPF38B-202ENST00000370022 MYH7P12883 1935 aa18.73■□□□□ 0.59
PRPF38B-202ENST00000370022 NPM3O75607 178 aaKnown RBP18.72■□□□□ 0.59
PRPF38B-202ENST00000370022 FAM83AQ86UY5 434 aa18.72■□□□□ 0.59
PRPF38B-202ENST00000370022 SKAP1Q86WV1 359 aa18.72■□□□□ 0.59
PRPF38B-202ENST00000370022 MIGA1Q8NAN2 632 aa18.72■□□□□ 0.59
PRPF38B-202ENST00000370022 RIOK1Q9BRS2 568 aaKnown RBP18.72■□□□□ 0.59
PRPF38B-202ENST00000370022 AIDAQ96BJ3 306 aa18.72■□□□□ 0.59
PRPF38B-202ENST00000370022 ZMYM1Q5SVZ6 1142 aa18.71■□□□□ 0.59
PRPF38B-202ENST00000370022 TEX11Q8IYF3 940 aa18.71■□□□□ 0.59
PRPF38B-202ENST00000370022 SH3RF3Q8TEJ3 882 aaPredicted RBP18.71■□□□□ 0.59
PRPF38B-202ENST00000370022 DEFB129Q9H1M3 183 aa18.71■□□□□ 0.59
PRPF38B-202ENST00000370022 HELLSQ9NRZ9 838 aa18.71■□□□□ 0.59
PRPF38B-202ENST00000370022 ENTPD3O75355 529 aa18.7■□□□□ 0.58
PRPF38B-202ENST00000370022 WDHD1O75717 1129 aaPredicted RBP18.7■□□□□ 0.58
PRPF38B-202ENST00000370022 CHGBP05060 677 aa18.7■□□□□ 0.58
PRPF38B-202ENST00000370022 DYNLL1P63167 89 aaKnown RBP18.7■□□□□ 0.58
PRPF38B-202ENST00000370022 USP48Q86UV5 1035 aa18.7■□□□□ 0.58
PRPF38B-202ENST00000370022 PUS7LQ9H0K6 701 aaKnown RBP18.7■□□□□ 0.58
PRPF38B-202ENST00000370022 TCP10L2B9ZVM9 353 aa18.69■□□□□ 0.58
PRPF38B-202ENST00000370022 MBD4O95243 580 aa18.69■□□□□ 0.58
PRPF38B-202ENST00000370022 ITGBL1O95965 494 aaPredicted RBP18.69■□□□□ 0.58
PRPF38B-202ENST00000370022 CACNB3P54284 484 aa18.69■□□□□ 0.58
PRPF38B-202ENST00000370022 SLFNL1Q499Z3 407 aa18.69■□□□□ 0.58
PRPF38B-202ENST00000370022 FAM151AQ8WW52 585 aa18.69■□□□□ 0.58
PRPF38B-202ENST00000370022 OSBP2Q969R2 916 aa18.69■□□□□ 0.58
PRPF38B-202ENST00000370022 GLIS2Q9BZE0 524 aaPredicted RBP18.69■□□□□ 0.58
PRPF38B-202ENST00000370022 CRNKL1Q9BZJ0 848 aaKnown RBP18.69■□□□□ 0.58
PRPF38B-202ENST00000370022 DIAPH3Q9NSV4 1193 aa18.69■□□□□ 0.58
PRPF38B-202ENST00000370022 ADM5C9JUS6 153 aa18.68■□□□□ 0.58
PRPF38B-202ENST00000370022 NFIAQ12857 509 aa18.68■□□□□ 0.58
PRPF38B-202ENST00000370022 RASA3Q14644 834 aa18.68■□□□□ 0.58
PRPF38B-202ENST00000370022 LCORLQ8N3X6 602 aa18.68■□□□□ 0.58
PRPF38B-202ENST00000370022 RPAP1Q9BWH6 1393 aaPredicted RBP18.68■□□□□ 0.58
PRPF38B-202ENST00000370022 CNTNAP1P78357 1384 aa18.68■□□□□ 0.58
PRPF38B-202ENST00000370022 GNAT2P19087 354 aa18.68■□□□□ 0.58
PRPF38B-202ENST00000370022 MCMDC2Q4G0Z9 681 aa18.68■□□□□ 0.58
PRPF38B-202ENST00000370022 ARMT1Q9H993 441 aa18.68■□□□□ 0.58
PRPF38B-202ENST00000370022 FAM198AQ9UFP1 575 aa18.68■□□□□ 0.58
PRPF38B-202ENST00000370022 AK9Q5TCS8 1911 aa18.67■□□□□ 0.58
PRPF38B-202ENST00000370022 COL2A1P02458 1487 aaPredicted RBP18.67■□□□□ 0.58
PRPF38B-202ENST00000370022 PICALMQ13492 652 aa18.67■□□□□ 0.58
PRPF38B-202ENST00000370022 STRBPQ96SI9 672 aaKnown RBP18.67■□□□□ 0.58
PRPF38B-202ENST00000370022 PASKQ96RG2 1323 aa18.66■□□□□ 0.58
PRPF38B-202ENST00000370022 GPAA1O43292 621 aa18.66■□□□□ 0.58
PRPF38B-202ENST00000370022 USP5P45974 858 aa18.66■□□□□ 0.58
PRPF38B-202ENST00000370022 MFAP1P55081 439 aaKnown RBP18.66■□□□□ 0.58
PRPF38B-202ENST00000370022 NMIQ13287 307 aaPredicted RBP18.66■□□□□ 0.58
PRPF38B-202ENST00000370022 SUPT20HL1Q3ZLR7 823 aa18.66■□□□□ 0.58
PRPF38B-202ENST00000370022 TGFBRAP1Q8WUH2 860 aa18.66■□□□□ 0.58
PRPF38B-202ENST00000370022 HOOK2Q96ED9 719 aa18.66■□□□□ 0.58
PRPF38B-202ENST00000370022 CDCA5Q96FF9 252 aa18.66■□□□□ 0.58
PRPF38B-202ENST00000370022 OSBPL5Q9H0X9 879 aaPredicted RBP18.66■□□□□ 0.58
PRPF38B-202ENST00000370022 FLT1P17948 1338 aa18.66■□□□□ 0.58
PRPF38B-202ENST00000370022 M0R2C6 588 aa18.65■□□□□ 0.58
PRPF38B-202ENST00000370022 NF2P35240 595 aa18.65■□□□□ 0.58
PRPF38B-202ENST00000370022 TCP10Q12799 353 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms