RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CCDC24Q8N4L8 307 aa26.4■■□□□ 1.82
LDB1-201ENST00000361198 USP28Q96RU2 1077 aa26.4■■□□□ 1.82
LDB1-201ENST00000361198 PDCL3Q9H2J4 239 aa26.4■■□□□ 1.82
LDB1-201ENST00000361198 RTCBQ9Y3I0 505 aaKnown RBP26.4■■□□□ 1.82
LDB1-201ENST00000361198 ADGRA1Q86SQ6 560 aa26.4■■□□□ 1.82
LDB1-201ENST00000361198 BICD2Q8TD16 824 aa26.4■■□□□ 1.82
LDB1-201ENST00000361198 IGDCC4Q8TDY8 1250 aa26.4■■□□□ 1.82
LDB1-201ENST00000361198 CHD4Q14839 1912 aa26.4■■□□□ 1.82
LDB1-201ENST00000361198 COL1A1P02452 1464 aaPredicted RBP26.39■■□□□ 1.82
LDB1-201ENST00000361198 UQCRHLA0A096LP55 91 aa26.39■■□□□ 1.82
LDB1-201ENST00000361198 UQCRHP07919 91 aa26.39■■□□□ 1.82
LDB1-201ENST00000361198 GNAT2P19087 354 aa26.39■■□□□ 1.82
LDB1-201ENST00000361198 MAP3K11Q16584 847 aa26.39■■□□□ 1.82
LDB1-201ENST00000361198 TMEM87BQ96K49 555 aa26.39■■□□□ 1.82
LDB1-201ENST00000361198 NLRP3Q96P20 1036 aa26.39■■□□□ 1.82
LDB1-201ENST00000361198 GNL3LQ9NVN8 582 aaKnown RBP26.39■■□□□ 1.82
LDB1-201ENST00000361198 RCOR1Q9UKL0 485 aa26.39■■□□□ 1.82
LDB1-201ENST00000361198 C4AP0C0L4 1744 aa26.39■■□□□ 1.81
LDB1-201ENST00000361198 C4BP0C0L5 1744 aa26.39■■□□□ 1.81
LDB1-201ENST00000361198 AP5Z1O43299 807 aa26.39■■□□□ 1.81
LDB1-201ENST00000361198 NR1I2O75469 434 aa26.39■■□□□ 1.81
LDB1-201ENST00000361198 ARHGEF1Q92888 912 aaKnown RBP26.39■■□□□ 1.81
LDB1-201ENST00000361198 C8orf76Q96K31 380 aa26.39■■□□□ 1.81
LDB1-201ENST00000361198 RXRAP19793 462 aa26.38■■□□□ 1.81
LDB1-201ENST00000361198 CYP7A1P22680 504 aa26.38■■□□□ 1.81
LDB1-201ENST00000361198 TDO2P48775 406 aa26.38■■□□□ 1.81
LDB1-201ENST00000361198 CAVIN4Q5BKX8 364 aa26.38■■□□□ 1.81
LDB1-201ENST00000361198 APOA5Q6Q788 366 aa26.38■■□□□ 1.81
LDB1-201ENST00000361198 FAM84BQ96KN1 310 aaPredicted RBP26.38■■□□□ 1.81
LDB1-201ENST00000361198 ZSWIM5Q9P217 1185 aa26.38■■□□□ 1.81
LDB1-201ENST00000361198 RPS8P62241 208 aaKnown RBP26.37■■□□□ 1.81
LDB1-201ENST00000361198 AKNAD1Q5T1N1 836 aa26.37■■□□□ 1.81
LDB1-201ENST00000361198 FBXO18Q8NFZ0 1043 aa26.37■■□□□ 1.81
LDB1-201ENST00000361198 ZNF830Q96NB3 372 aaPredicted RBP26.37■■□□□ 1.81
LDB1-201ENST00000361198 NACAP1Q9BZK3 213 aa26.37■■□□□ 1.81
LDB1-201ENST00000361198 DDX19AQ9NUU7 478 aaKnown RBP26.37■■□□□ 1.81
LDB1-201ENST00000361198 COL24A1Q17RW2 1714 aa26.37■■□□□ 1.81
LDB1-201ENST00000361198 METAP2P50579 478 aaKnown RBP eCLIP26.37■■□□□ 1.81
LDB1-201ENST00000361198 RBM43Q6ZSC3 357 aaKnown RBP26.37■■□□□ 1.81
LDB1-201ENST00000361198 FAM200AQ8TCP9 573 aa26.37■■□□□ 1.81
LDB1-201ENST00000361198 TNMDQ9H2S6 317 aa26.37■■□□□ 1.81
LDB1-201ENST00000361198 TTC12Q9H892 705 aaPredicted RBP26.37■■□□□ 1.81
LDB1-201ENST00000361198 LY9Q9HBG7 655 aa26.37■■□□□ 1.81
LDB1-201ENST00000361198 GJB4Q9NTQ9 266 aa26.37■■□□□ 1.81
LDB1-201ENST00000361198 RAI14Q9P0K7 980 aa26.37■■□□□ 1.81
LDB1-201ENST00000361198 ATL3Q6DD88 541 aa26.36■■□□□ 1.81
LDB1-201ENST00000361198 TPTE2Q6XPS3 522 aa26.36■■□□□ 1.81
LDB1-201ENST00000361198 VPS37DQ86XT2 251 aa26.36■■□□□ 1.81
LDB1-201ENST00000361198 GJD4Q96KN9 370 aaPredicted RBP26.36■■□□□ 1.81
LDB1-201ENST00000361198 ZNF396Q96N95 335 aaPredicted RBP26.36■■□□□ 1.81
LDB1-201ENST00000361198 DYNC1I1O14576 645 aa26.36■■□□□ 1.81
LDB1-201ENST00000361198 NOLC1Q14978 699 aaKnown RBP eCLIP26.36■■□□□ 1.81
LDB1-201ENST00000361198 SPTLC3Q9NUV7 552 aa26.36■■□□□ 1.81
LDB1-201ENST00000361198 TMEM67Q5HYA8 995 aa26.35■■□□□ 1.81
LDB1-201ENST00000361198 MFSD6Q6ZSS7 791 aa26.35■■□□□ 1.81
LDB1-201ENST00000361198 MPNDQ8N594 471 aa26.35■■□□□ 1.81
LDB1-201ENST00000361198 TAF1LQ8IZX4 1826 aa26.35■■□□□ 1.81
LDB1-201ENST00000361198 KLRK1P26718 216 aa26.35■■□□□ 1.81
LDB1-201ENST00000361198 CDC27P30260 824 aa26.35■■□□□ 1.81
LDB1-201ENST00000361198 SGMS1Q86VZ5 419 aa26.35■■□□□ 1.81
LDB1-201ENST00000361198 MICU3Q86XE3 530 aa26.35■■□□□ 1.81
LDB1-201ENST00000361198 CKAP2LQ8IYA6 745 aa26.35■■□□□ 1.81
LDB1-201ENST00000361198 CLSTN2Q9H4D0 955 aa26.35■■□□□ 1.81
LDB1-201ENST00000361198 CNNM2Q9H8M5 875 aa26.35■■□□□ 1.81
LDB1-201ENST00000361198 MRVI1Q9Y6F6 885 aa26.35■■□□□ 1.81
LDB1-201ENST00000361198 TIAM2Q8IVF5 1701 aa26.35■■□□□ 1.81
LDB1-201ENST00000361198 TYRO3Q06418 890 aa26.34■■□□□ 1.81
LDB1-201ENST00000361198 STAG1Q8WVM7 1258 aa26.34■■□□□ 1.81
LDB1-201ENST00000361198 NFXL1Q6ZNB6 911 aa26.34■■□□□ 1.81
LDB1-201ENST00000361198 CCDC144CPQ8IYA2 1237 aa26.34■■□□□ 1.81
LDB1-201ENST00000361198 SDR42E1Q8WUS8 393 aa26.34■■□□□ 1.81
LDB1-201ENST00000361198 KRT23Q9C075 422 aa26.34■■□□□ 1.81
LDB1-201ENST00000361198 CACNA1SQ13698 1873 aa26.33■■□□□ 1.81
LDB1-201ENST00000361198 IFIT3O14879 490 aaKnown RBP26.33■■□□□ 1.81
LDB1-201ENST00000361198 ZBTB43O43298 467 aa26.33■■□□□ 1.81
LDB1-201ENST00000361198 TPM3P06753 285 aa26.33■■□□□ 1.81
LDB1-201ENST00000361198 LIFRP42702 1097 aa26.33■■□□□ 1.81
LDB1-201ENST00000361198 GLIPR1L2Q4G1C9 344 aa26.33■■□□□ 1.81
LDB1-201ENST00000361198 LY75O60449 1722 aa26.33■■□□□ 1.81
LDB1-201ENST00000361198 FBXO33Q7Z6M2 555 aa26.32■■□□□ 1.8
LDB1-201ENST00000361198 STK11IPQ8N1F8 1099 aa26.32■■□□□ 1.8
LDB1-201ENST00000361198 MYL10Q9BUA6 226 aa26.32■■□□□ 1.8
LDB1-201ENST00000361198 MAGEB6P1A0A0J9YX57 407 aa26.32■■□□□ 1.8
LDB1-201ENST00000361198 POLR3DP05423 398 aaPredicted RBP26.32■■□□□ 1.8
LDB1-201ENST00000361198 RRP12Q5JTH9 1297 aaKnown RBP26.32■■□□□ 1.8
LDB1-201ENST00000361198 MEX3CQ5U5Q3 659 aaKnown RBP26.32■■□□□ 1.8
LDB1-201ENST00000361198 AIFM3Q96NN9 605 aa26.32■■□□□ 1.8
LDB1-201ENST00000361198 SBF2Q86WG5 1849 aa26.32■■□□□ 1.8
LDB1-201ENST00000361198 TOMM22Q9NS69 142 aa26.31■■□□□ 1.8
LDB1-201ENST00000361198 TM4SF1P30408 202 aa26.31■■□□□ 1.8
LDB1-201ENST00000361198 ZNF384Q8TF68 577 aa26.31■■□□□ 1.8
LDB1-201ENST00000361198 PHKBQ93100 1093 aa26.31■■□□□ 1.8
LDB1-201ENST00000361198 RIOK1Q9BRS2 568 aaKnown RBP26.31■■□□□ 1.8
LDB1-201ENST00000361198 FAM217BQ9NTX9 383 aaPredicted RBP26.31■■□□□ 1.8
LDB1-201ENST00000361198 PLCB2Q00722 1185 aa26.3■■□□□ 1.8
LDB1-201ENST00000361198 NTRK3Q16288 839 aa26.3■■□□□ 1.8
LDB1-201ENST00000361198 CCAR1Q8IX12 1150 aaKnown RBP26.3■■□□□ 1.8
LDB1-201ENST00000361198 MAP7D2Q96T17 732 aa26.3■■□□□ 1.8
LDB1-201ENST00000361198 CDKL5O76039 1030 aa26.3■■□□□ 1.8
LDB1-201ENST00000361198 RFC4P35249 363 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms