RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 NOC4LQ9BVI4 516 aaKnown RBP20.29■□□□□ 0.84
SMC4-201ENST00000344722 SAR1BQ9Y6B6 198 aa20.29■□□□□ 0.84
SMC4-201ENST00000344722 SLC9C2Q5TAH2 1124 aa20.29■□□□□ 0.84
SMC4-201ENST00000344722 PDE11AQ9HCR9 933 aa20.29■□□□□ 0.84
SMC4-201ENST00000344722 SLC4A4Q9Y6R1 1079 aa20.29■□□□□ 0.84
SMC4-201ENST00000344722 ACEP12821 1306 aa20.29■□□□□ 0.84
SMC4-201ENST00000344722 MPHOSPH10O00566 681 aaKnown RBP20.29■□□□□ 0.84
SMC4-201ENST00000344722 KRT9P35527 623 aa20.29■□□□□ 0.84
SMC4-201ENST00000344722 CALCOCO2Q13137 446 aa20.29■□□□□ 0.84
SMC4-201ENST00000344722 MTMR3Q13615 1198 aa20.29■□□□□ 0.84
SMC4-201ENST00000344722 PAXIP1Q6ZW49 1069 aaPredicted RBP20.29■□□□□ 0.84
SMC4-201ENST00000344722 JARID2Q92833 1246 aaPredicted RBP20.29■□□□□ 0.84
SMC4-201ENST00000344722 A0A1W2PP64 1363 aa20.28■□□□□ 0.84
SMC4-201ENST00000344722 LIG3P49916 1009 aa20.28■□□□□ 0.84
SMC4-201ENST00000344722 LMBR1LQ6UX01 489 aa20.28■□□□□ 0.84
SMC4-201ENST00000344722 CTTNBP2Q8WZ74 1663 aa20.28■□□□□ 0.84
SMC4-201ENST00000344722 PNMA8AQ86V59 439 aaPredicted RBP20.28■□□□□ 0.84
SMC4-201ENST00000344722 PHLPP2Q6ZVD8 1323 aa20.28■□□□□ 0.84
SMC4-201ENST00000344722 KDM5DQ9BY66 1539 aa20.28■□□□□ 0.84
SMC4-201ENST00000344722 SLC8A1P32418 973 aa20.28■□□□□ 0.84
SMC4-201ENST00000344722 POSTNQ15063 836 aa20.28■□□□□ 0.84
SMC4-201ENST00000344722 ATP2B3Q16720 1220 aa20.28■□□□□ 0.84
SMC4-201ENST00000344722 XAGE3Q8WTP9 111 aa20.28■□□□□ 0.84
SMC4-201ENST00000344722 EXOC4Q96A65 974 aa20.28■□□□□ 0.84
SMC4-201ENST00000344722 A2MP01023 1474 aa20.28■□□□□ 0.84
SMC4-201ENST00000344722 TRAPPC8Q9Y2L5 1435 aa20.28■□□□□ 0.84
SMC4-201ENST00000344722 CD2BP2O95400 341 aaKnown RBP20.28■□□□□ 0.84
SMC4-201ENST00000344722 PAK1Q13153 545 aa20.28■□□□□ 0.84
SMC4-201ENST00000344722 ERMNQ8TAM6 284 aa20.28■□□□□ 0.84
SMC4-201ENST00000344722 TFCP2Q12800 502 aa20.27■□□□□ 0.84
SMC4-201ENST00000344722 SYCP3Q8IZU3 236 aa20.27■□□□□ 0.84
SMC4-201ENST00000344722 SPTLC3Q9NUV7 552 aa20.27■□□□□ 0.84
SMC4-201ENST00000344722 POLR2DO15514 142 aaKnown RBP20.27■□□□□ 0.84
SMC4-201ENST00000344722 NRBP1Q9UHY1 535 aa20.27■□□□□ 0.84
SMC4-201ENST00000344722 PPIP5K1Q6PFW1 1433 aa20.27■□□□□ 0.84
SMC4-201ENST00000344722 ZC3H6P61129 1189 aaKnown RBP20.27■□□□□ 0.84
SMC4-201ENST00000344722 G2E3Q7L622 706 aa20.27■□□□□ 0.84
SMC4-201ENST00000344722 BCAS4Q8TDM0 211 aa20.27■□□□□ 0.84
SMC4-201ENST00000344722 SLF1Q9BQI6 1058 aa20.27■□□□□ 0.84
SMC4-201ENST00000344722 VCXQ9H320 206 aa20.27■□□□□ 0.84
SMC4-201ENST00000344722 FEZ2Q9UHY8 353 aaPredicted RBP20.27■□□□□ 0.84
SMC4-201ENST00000344722 GNAT2P19087 354 aa20.27■□□□□ 0.83
SMC4-201ENST00000344722 CABP5Q9NP86 173 aa20.27■□□□□ 0.83
SMC4-201ENST00000344722 MTUS1Q9ULD2 1270 aa20.27■□□□□ 0.83
SMC4-201ENST00000344722 ADKP55263 362 aaKnown RBP20.26■□□□□ 0.83
SMC4-201ENST00000344722 DTHD1Q6ZMT9 781 aa20.26■□□□□ 0.83
SMC4-201ENST00000344722 CNKSR2Q8WXI2 1034 aa20.26■□□□□ 0.83
SMC4-201ENST00000344722 UTP11Q9Y3A2 253 aaKnown RBP20.26■□□□□ 0.83
SMC4-201ENST00000344722 CFAP221Q4G0U5 840 aa20.26■□□□□ 0.83
SMC4-201ENST00000344722 TMOD3Q9NYL9 352 aa20.26■□□□□ 0.83
SMC4-201ENST00000344722 PALD1Q9ULE6 856 aa20.26■□□□□ 0.83
SMC4-201ENST00000344722 JAK2O60674 1132 aa20.26■□□□□ 0.83
SMC4-201ENST00000344722 VWA3BQ502W6 1294 aa20.26■□□□□ 0.83
SMC4-201ENST00000344722 TTC6Q86TZ1 520 aa20.26■□□□□ 0.83
SMC4-201ENST00000344722 FAM227BQ96M60 508 aa20.26■□□□□ 0.83
SMC4-201ENST00000344722 ACTN4O43707 911 aaKnown RBP20.26■□□□□ 0.83
SMC4-201ENST00000344722 ZSCAN29Q8IWY8 852 aaPredicted RBP20.26■□□□□ 0.83
SMC4-201ENST00000344722 MCM7P33993 719 aa20.26■□□□□ 0.83
SMC4-201ENST00000344722 NCOA5Q9HCD5 579 aaKnown RBP20.26■□□□□ 0.83
SMC4-201ENST00000344722 RBM6P78332 1123 aaKnown RBP20.25■□□□□ 0.83
SMC4-201ENST00000344722 COPS6Q7L5N1 327 aa20.25■□□□□ 0.83
SMC4-201ENST00000344722 EHMT1Q9H9B1 1298 aa20.25■□□□□ 0.83
SMC4-201ENST00000344722 BAIAP2L1Q9UHR4 511 aa20.25■□□□□ 0.83
SMC4-201ENST00000344722 ZNF652Q9Y2D9 606 aa20.25■□□□□ 0.83
SMC4-201ENST00000344722 LRCH2Q5VUJ6 765 aa20.25■□□□□ 0.83
SMC4-201ENST00000344722 CRNKL1Q9BZJ0 848 aaKnown RBP20.25■□□□□ 0.83
SMC4-201ENST00000344722 A0A087WUV0 522 aaPredicted RBP20.25■□□□□ 0.83
SMC4-201ENST00000344722 VWA3AA6NCI4 1184 aa20.25■□□□□ 0.83
SMC4-201ENST00000344722 GCKP35557 465 aa20.25■□□□□ 0.83
SMC4-201ENST00000344722 CUL4AQ13619 759 aa20.25■□□□□ 0.83
SMC4-201ENST00000344722 TAOK1Q7L7X3 1001 aa20.25■□□□□ 0.83
SMC4-201ENST00000344722 SREK1Q8WXA9 508 aaKnown RBP20.25■□□□□ 0.83
SMC4-201ENST00000344722 ZNF521Q96K83 1311 aa20.24■□□□□ 0.83
SMC4-201ENST00000344722 PPP1R7Q15435 360 aa20.24■□□□□ 0.83
SMC4-201ENST00000344722 SRGAP1Q7Z6B7 1085 aa20.24■□□□□ 0.83
SMC4-201ENST00000344722 RPAINQ86UA6 219 aa20.24■□□□□ 0.83
SMC4-201ENST00000344722 CCDC25Q86WR0 208 aa20.24■□□□□ 0.83
SMC4-201ENST00000344722 CHAMP1Q96JM3 812 aa20.24■□□□□ 0.83
SMC4-201ENST00000344722 TMEM87BQ96K49 555 aa20.24■□□□□ 0.83
SMC4-201ENST00000344722 VAT1LQ9HCJ6 419 aa20.24■□□□□ 0.83
SMC4-201ENST00000344722 SEC31AO94979 1220 aaKnown RBP20.24■□□□□ 0.83
SMC4-201ENST00000344722 CACTINQ8WUQ7 758 aaKnown RBP20.24■□□□□ 0.83
SMC4-201ENST00000344722 ZSWIM6Q9HCJ5 1215 aa20.24■□□□□ 0.83
SMC4-201ENST00000344722 PLCB1Q9NQ66 1216 aa20.24■□□□□ 0.83
SMC4-201ENST00000344722 IFNL2Q8IZJ0 200 aa20.24■□□□□ 0.83
SMC4-201ENST00000344722 DDX41Q9UJV9 622 aaKnown RBP20.24■□□□□ 0.83
SMC4-201ENST00000344722 STX10O60499 249 aa20.24■□□□□ 0.83
SMC4-201ENST00000344722 DEXIO95424 95 aa20.24■□□□□ 0.83
SMC4-201ENST00000344722 LONRF2Q1L5Z9 754 aa20.24■□□□□ 0.83
SMC4-201ENST00000344722 SMARCC2Q8TAQ2 1214 aa20.24■□□□□ 0.83
SMC4-201ENST00000344722 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.24■□□□□ 0.834e-98■■■■■ 943.1
SMC4-201ENST00000344722 PNMA6EA0A0J9YXQ4 647 aa20.23■□□□□ 0.83
SMC4-201ENST00000344722 HEATR3Q7Z4Q2 680 aa20.23■□□□□ 0.83
SMC4-201ENST00000344722 BICC1Q9H694 974 aaKnown RBP20.23■□□□□ 0.83
SMC4-201ENST00000344722 PRDM11Q9NQV5 511 aa20.23■□□□□ 0.83
SMC4-201ENST00000344722 CIB2O75838 187 aa20.23■□□□□ 0.83
SMC4-201ENST00000344722 RXRAP19793 462 aa20.23■□□□□ 0.83
SMC4-201ENST00000344722 PLCD1P51178 756 aa20.23■□□□□ 0.83
SMC4-201ENST00000344722 HNRNPH2P55795 449 aaKnown RBP20.23■□□□□ 0.83
SMC4-201ENST00000344722 AKAP4Q5JQC9 854 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms