RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 GNL3LQ9NVN8 582 aaKnown RBP18.15■□□□□ 0.5
MBD1-203ENST00000339998 SALL1Q9NSC2 1324 aa18.15■□□□□ 0.5
MBD1-203ENST00000339998 DOCK2Q92608 1830 aa18.15■□□□□ 0.5
MBD1-203ENST00000339998 PRDM1O75626 825 aa18.15■□□□□ 0.5
MBD1-203ENST00000339998 CDC27P30260 824 aa18.15■□□□□ 0.5
MBD1-203ENST00000339998 HIBADHP31937 336 aaKnown RBP18.15■□□□□ 0.5
MBD1-203ENST00000339998 FBXO33Q7Z6M2 555 aa18.15■□□□□ 0.5
MBD1-203ENST00000339998 CARMIL3Q8ND23 1372 aa18.15■□□□□ 0.5
MBD1-203ENST00000339998 CMTR1Q8N1G2 835 aaKnown RBP18.15■□□□□ 0.5
MBD1-203ENST00000339998 CCDC82Q8N4S0 544 aa18.15■□□□□ 0.5
MBD1-203ENST00000339998 SPATA32Q96LK8 384 aa18.15■□□□□ 0.5
MBD1-203ENST00000339998 MAGEB6P1A0A0J9YX57 407 aa18.14■□□□□ 0.49
MBD1-203ENST00000339998 A0A1B0GUL6 1792 aa18.14■□□□□ 0.49
MBD1-203ENST00000339998 GRIK5Q16478 980 aa18.14■□□□□ 0.49
MBD1-203ENST00000339998 LEO1Q8WVC0 666 aaPredicted RBP18.14■□□□□ 0.49
MBD1-203ENST00000339998 AATFQ9NY61 560 aaKnown RBP eCLIP18.14■□□□□ 0.49
MBD1-203ENST00000339998 ANGEL1Q9UNK9 670 aaKnown RBP18.14■□□□□ 0.49
MBD1-203ENST00000339998 BRWD3Q6RI45 1802 aa18.14■□□□□ 0.49
MBD1-203ENST00000339998 SH2B2O14492 632 aaPredicted RBP18.14■□□□□ 0.49
MBD1-203ENST00000339998 ILDR1Q86SU0 546 aaPredicted RBP18.14■□□□□ 0.49
MBD1-203ENST00000339998 IGDCC4Q8TDY8 1250 aa18.14■□□□□ 0.49
MBD1-203ENST00000339998 LLPHQ9BRT6 129 aaKnown RBP18.14■□□□□ 0.49
MBD1-203ENST00000339998 POLR3DP05423 398 aaPredicted RBP18.13■□□□□ 0.49
MBD1-203ENST00000339998 MECOMQ03112 1051 aa18.13■□□□□ 0.49
MBD1-203ENST00000339998 NAA16Q6N069 864 aaPredicted RBP18.13■□□□□ 0.49
MBD1-203ENST00000339998 NFXL1Q6ZNB6 911 aa18.13■□□□□ 0.49
MBD1-203ENST00000339998 PGBD1Q96JS3 809 aa18.13■□□□□ 0.49
MBD1-203ENST00000339998 RIOK1Q9BRS2 568 aaKnown RBP18.13■□□□□ 0.49
MBD1-203ENST00000339998 BAZ2AQ9UIF9 1905 aaKnown RBP18.13■□□□□ 0.49
MBD1-203ENST00000339998 CPLX1O14810 134 aa18.13■□□□□ 0.49
MBD1-203ENST00000339998 SERPINB2P05120 415 aa18.13■□□□□ 0.49
MBD1-203ENST00000339998 EVCP57679 992 aa18.13■□□□□ 0.49
MBD1-203ENST00000339998 TMEM67Q5HYA8 995 aa18.13■□□□□ 0.49
MBD1-203ENST00000339998 ORC3Q9UBD5 711 aaPredicted RBP18.13■□□□□ 0.49
MBD1-203ENST00000339998 IFIT3O14879 490 aaKnown RBP18.12■□□□□ 0.49
MBD1-203ENST00000339998 DDR1Q08345 913 aa18.12■□□□□ 0.49
MBD1-203ENST00000339998 AKNAD1Q5T1N1 836 aa18.12■□□□□ 0.49
MBD1-203ENST00000339998 MYH13Q9UKX3 1938 aa18.12■□□□□ 0.49
MBD1-203ENST00000339998 APOA5Q6Q788 366 aa18.12■□□□□ 0.49
MBD1-203ENST00000339998 MFSD6Q6ZSS7 791 aa18.12■□□□□ 0.49
MBD1-203ENST00000339998 LY9Q9HBG7 655 aa18.12■□□□□ 0.49
MBD1-203ENST00000339998 TXNRD1Q16881 649 aa18.12■□□□□ 0.49
MBD1-203ENST00000339998 OLFM4Q6UX06 510 aa18.12■□□□□ 0.49
MBD1-203ENST00000339998 NSUN4Q96CB9 384 aaKnown RBP18.12■□□□□ 0.49
MBD1-203ENST00000339998 USP28Q96RU2 1077 aa18.12■□□□□ 0.49
MBD1-203ENST00000339998 HMGN5P82970 282 aaKnown RBP18.11■□□□□ 0.49
MBD1-203ENST00000339998 ALX1Q15699 326 aa18.11■□□□□ 0.49
MBD1-203ENST00000339998 ISY1Q9ULR0 285 aaKnown RBP18.11■□□□□ 0.49
MBD1-203ENST00000339998 COL24A1Q17RW2 1714 aa18.11■□□□□ 0.49
MBD1-203ENST00000339998 METAP2P50579 478 aaKnown RBP eCLIP18.11■□□□□ 0.49
MBD1-203ENST00000339998 PPARAQ07869 468 aa18.11■□□□□ 0.49
MBD1-203ENST00000339998 CHMP4CQ96CF2 233 aa18.11■□□□□ 0.49
MBD1-203ENST00000339998 CACNA1SQ13698 1873 aa18.1■□□□□ 0.49
MBD1-203ENST00000339998 RRAGDQ9NQL2 400 aaPredicted RBP18.1■□□□□ 0.49
MBD1-203ENST00000339998 PNPLA7Q6ZV29 1317 aa18.1■□□□□ 0.49
MBD1-203ENST00000339998 GRAPQ13588 217 aa18.1■□□□□ 0.49
MBD1-203ENST00000339998 ZNF827Q17R98 1081 aa18.1■□□□□ 0.49
MBD1-203ENST00000339998 CCDC183Q5T5S1 534 aa18.1■□□□□ 0.49
MBD1-203ENST00000339998 FBXL16Q8N461 479 aa18.1■□□□□ 0.49
MBD1-203ENST00000339998 GRAPLQ8TC17 118 aaPredicted RBP18.1■□□□□ 0.49
MBD1-203ENST00000339998 NACAP1Q9BZK3 213 aa18.1■□□□□ 0.49
MBD1-203ENST00000339998 CYP2D6P10635 497 aa18.09■□□□□ 0.49
MBD1-203ENST00000339998 DIXDC1Q155Q3 683 aa18.09■□□□□ 0.49
MBD1-203ENST00000339998 CKAP2LQ8IYA6 745 aa18.09■□□□□ 0.49
MBD1-203ENST00000339998 MPNDQ8N594 471 aa18.09■□□□□ 0.49
MBD1-203ENST00000339998 SYAP1Q96A49 352 aaPredicted RBP18.09■□□□□ 0.49
MBD1-203ENST00000339998 FAM217BQ9NTX9 383 aaPredicted RBP18.09■□□□□ 0.49
MBD1-203ENST00000339998 KIF28PB7ZC32 967 aa18.09■□□□□ 0.49
MBD1-203ENST00000339998 GPSM2P81274 684 aa18.09■□□□□ 0.49
MBD1-203ENST00000339998 RPGRQ92834 1020 aaKnown RBP18.09■□□□□ 0.49
MBD1-203ENST00000339998 C8orf76Q96K31 380 aa18.09■□□□□ 0.49
MBD1-203ENST00000339998 ANKRD2Q9GZV1 360 aa18.09■□□□□ 0.49
MBD1-203ENST00000339998 TSPY26PQ9H489 355 aa18.09■□□□□ 0.49
MBD1-203ENST00000339998 DACT1Q9NYF0 836 aa18.09■□□□□ 0.49
MBD1-203ENST00000339998 GOLGA6L4A6NEF3 574 aa18.08■□□□□ 0.49
MBD1-203ENST00000339998 USP17L12C9JPN9 530 aa18.08■□□□□ 0.49
MBD1-203ENST00000339998 USP17L21D6R901 530 aa18.08■□□□□ 0.49
MBD1-203ENST00000339998 RANBP6O60518 1105 aaKnown RBP18.08■□□□□ 0.49
MBD1-203ENST00000339998 NR1I2O75469 434 aa18.08■□□□□ 0.49
MBD1-203ENST00000339998 BAZ2BQ9UIF8 2168 aaKnown RBP18.08■□□□□ 0.49
MBD1-203ENST00000339998 UBR3Q6ZT12 1888 aa18.08■□□□□ 0.48
MBD1-203ENST00000339998 ZBTB43O43298 467 aa18.08■□□□□ 0.48
MBD1-203ENST00000339998 MSL1Q68DK7 614 aa18.07■□□□□ 0.48
MBD1-203ENST00000339998 BICD2Q8TD16 824 aa18.07■□□□□ 0.48
MBD1-203ENST00000339998 NUP133Q8WUM0 1156 aa18.07■□□□□ 0.48
MBD1-203ENST00000339998 SCAND2PQ9GZW5 306 aaPredicted RBP18.07■□□□□ 0.48
MBD1-203ENST00000339998 IRS2Q9Y4H2 1338 aa18.07■□□□□ 0.48
MBD1-203ENST00000339998 MYH2Q9UKX2 1941 aa18.07■□□□□ 0.48
MBD1-203ENST00000339998 GOLGA8AA7E2F4 631 aa18.07■□□□□ 0.48
MBD1-203ENST00000339998 GUCY1A2P33402 732 aa18.07■□□□□ 0.48
MBD1-203ENST00000339998 CHD4Q14839 1912 aa18.07■□□□□ 0.48
MBD1-203ENST00000339998 NMT2O60551 498 aa18.06■□□□□ 0.48
MBD1-203ENST00000339998 GNAT2P19087 354 aa18.06■□□□□ 0.48
MBD1-203ENST00000339998 SLC12A7Q9Y666 1083 aa18.06■□□□□ 0.48
MBD1-203ENST00000339998 A0A087WWV3 80 aa18.06■□□□□ 0.48
MBD1-203ENST00000339998 hCG_1642624A0A1W2PR95 340 aa18.06■□□□□ 0.48
MBD1-203ENST00000339998 RGL2O15211 777 aa18.06■□□□□ 0.48
MBD1-203ENST00000339998 STAG1Q8WVM7 1258 aa18.06■□□□□ 0.48
MBD1-203ENST00000339998 ZSCAN16Q9H4T2 348 aaPredicted RBP18.06■□□□□ 0.48
MBD1-203ENST00000339998 ZMYM6O95789 1325 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms