RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 POTEB3A0JP26 581 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 DNA2P51530 1060 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 ITIH3Q06033 890 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 POTEBQ6S5H4 581 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 MRFAP1L1Q96HT8 127 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 DNAJC25Q9H1X3 360 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 ZC4H2Q9NQZ6 224 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 EPS15L1Q9UBC2 864 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 TACC3Q9Y6A5 838 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 FAM169AQ9Y6X4 670 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 IFT140Q96RY7 1462 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 DUOX2Q9NRD8 1548 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 A0A1B0GVL5 298 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 HPDP32754 393 aaPredicted RBP6.16□□□□□ -1.42
PTPRB-202ENST00000334414 CCDC84Q86UT8 332 aaPredicted RBP6.16□□□□□ -1.42
PTPRB-202ENST00000334414 IQUBQ8NA54 791 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 MLKLQ8NB16 471 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 DACT1Q9NYF0 836 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 CTTNBP2NLQ9P2B4 639 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 ZNF75DP51815 510 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 TMEM67Q5HYA8 995 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 RRP15Q9Y3B9 282 aaKnown RBP6.16□□□□□ -1.42
PTPRB-202ENST00000334414 STARD3NLO95772 234 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 GNA14O95837 355 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 CCDC124Q96CT7 223 aaKnown RBP6.16□□□□□ -1.42
PTPRB-202ENST00000334414 OLFM3Q96PB7 478 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 IDH1O75874 414 aaKnown RBP6.16□□□□□ -1.42
PTPRB-202ENST00000334414 NBPF14Q5TI25 921 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 ANKRD20A3Q5VUR7 823 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 TRIM42Q8IWZ5 723 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 PPP4R1Q8TF05 950 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 ESYT1Q9BSJ8 1104 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 PPP1R2P3Q6NXS1 205 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 MAK16Q9BXY0 300 aaKnown RBP6.16□□□□□ -1.42
PTPRB-202ENST00000334414 IQSEC3Q9UPP2 1182 aaPredicted RBP6.16□□□□□ -1.42
PTPRB-202ENST00000334414 IFIT3O14879 490 aaKnown RBP6.16□□□□□ -1.42
PTPRB-202ENST00000334414 CRCPO75575 148 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 HEATR3Q7Z4Q2 680 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 PUS7Q96PZ0 661 aaKnown RBP6.16□□□□□ -1.42
PTPRB-202ENST00000334414 NLRP2Q9NX02 1062 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 TRIM75PA6NK02 468 aa6.15□□□□□ -1.42
PTPRB-202ENST00000334414 CALUO43852 315 aaPredicted RBP6.15□□□□□ -1.42
PTPRB-202ENST00000334414 ATF3P18847 181 aa6.15□□□□□ -1.42
PTPRB-202ENST00000334414 ELF2Q15723 593 aa6.15□□□□□ -1.42
PTPRB-202ENST00000334414 NBPF10Q6P3W6 841 aaKnown RBP6.15□□□□□ -1.42
PTPRB-202ENST00000334414 RABGGTAQ92696 567 aa6.15□□□□□ -1.42
PTPRB-202ENST00000334414 ANGPTL2Q9UKU9 493 aa6.15□□□□□ -1.42
PTPRB-202ENST00000334414 CAPN7Q9Y6W3 813 aa6.15□□□□□ -1.42
PTPRB-202ENST00000334414 FAM135BQ49AJ0 1406 aa6.15□□□□□ -1.42
PTPRB-202ENST00000334414 CCDC170Q8IYT3 715 aa6.15□□□□□ -1.42
PTPRB-202ENST00000334414 MICAL1Q8TDZ2 1067 aa6.15□□□□□ -1.42
PTPRB-202ENST00000334414 MMRN2Q9H8L6 949 aa6.15□□□□□ -1.42
PTPRB-202ENST00000334414 CABP2Q9NPB3 220 aa6.15□□□□□ -1.42
PTPRB-202ENST00000334414 FRMD4BQ9Y2L6 1034 aa6.15□□□□□ -1.42
PTPRB-202ENST00000334414 SKIP12755 728 aa6.15□□□□□ -1.42
PTPRB-202ENST00000334414 SLFNL1Q499Z3 407 aa6.15□□□□□ -1.42
PTPRB-202ENST00000334414 PSMD1Q99460 953 aa6.15□□□□□ -1.42
PTPRB-202ENST00000334414 HHATQ5VTY9 493 aa6.15□□□□□ -1.42
PTPRB-202ENST00000334414 MMS22LQ6ZRQ5 1243 aa6.15□□□□□ -1.42
PTPRB-202ENST00000334414 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.15□□□□□ -1.42
PTPRB-202ENST00000334414 POGZQ7Z3K3 1410 aa6.15□□□□□ -1.42
PTPRB-202ENST00000334414 BIN1O00499 593 aa6.15□□□□□ -1.43
PTPRB-202ENST00000334414 MAN1A2O60476 641 aa6.15□□□□□ -1.43
PTPRB-202ENST00000334414 ST5P78524 1137 aa6.15□□□□□ -1.43
PTPRB-202ENST00000334414 PRPF31Q8WWY3 499 aaKnown RBP6.15□□□□□ -1.43
PTPRB-202ENST00000334414 DBF4Q9UBU7 674 aaPredicted RBP6.15□□□□□ -1.43
PTPRB-202ENST00000334414 BLMP54132 1417 aaPredicted RBP6.15□□□□□ -1.43
PTPRB-202ENST00000334414 ARHGAP31Q2M1Z3 1444 aa6.15□□□□□ -1.43
PTPRB-202ENST00000334414 PSDA5PKW4 1024 aaPredicted RBP6.15□□□□□ -1.43
PTPRB-202ENST00000334414 CTNNA1P35221 906 aaKnown RBP6.15□□□□□ -1.43
PTPRB-202ENST00000334414 CCDC82Q8N4S0 544 aa6.15□□□□□ -1.43
PTPRB-202ENST00000334414 ZNF526Q8TF50 670 aaPredicted RBP6.15□□□□□ -1.43
PTPRB-202ENST00000334414 ZSWIM4Q9H7M6 989 aa6.15□□□□□ -1.43
PTPRB-202ENST00000334414 MKNK2Q9HBH9 465 aa6.15□□□□□ -1.43
PTPRB-202ENST00000334414 RIPOR2Q9Y4F9 1068 aa6.15□□□□□ -1.43
PTPRB-202ENST00000334414 RASGRF2O14827 1237 aa6.15□□□□□ -1.43
PTPRB-202ENST00000334414 BAG3O95817 575 aa6.15□□□□□ -1.43
PTPRB-202ENST00000334414 ESRRGP62508 458 aa6.15□□□□□ -1.43
PTPRB-202ENST00000334414 ESR2Q92731 530 aa6.15□□□□□ -1.43
PTPRB-202ENST00000334414 TEX13AQ9BXU3 409 aaPredicted RBP6.15□□□□□ -1.43
PTPRB-202ENST00000334414 FGFR1OP2Q9NVK5 253 aa6.15□□□□□ -1.43
PTPRB-202ENST00000334414 SEPT10Q9P0V9 454 aa6.15□□□□□ -1.43
PTPRB-202ENST00000334414 ORC3Q9UBD5 711 aaPredicted RBP6.15□□□□□ -1.43
PTPRB-202ENST00000334414 ORC6Q9Y5N6 252 aa6.15□□□□□ -1.43
PTPRB-202ENST00000334414 SHANK2Q9UPX8 1470 aa6.15□□□□□ -1.43
PTPRB-202ENST00000334414 NAA16Q6N069 864 aaPredicted RBP6.15□□□□□ -1.43
PTPRB-202ENST00000334414 PPP1R21Q6ZMI0 780 aa6.15□□□□□ -1.43
PTPRB-202ENST00000334414 SSH1Q8WYL5 1049 aa6.15□□□□□ -1.43
PTPRB-202ENST00000334414 CRNKL1Q9BZJ0 848 aaKnown RBP6.15□□□□□ -1.43
PTPRB-202ENST00000334414 IFIT5Q13325 482 aaKnown RBP6.14□□□□□ -1.43
PTPRB-202ENST00000334414 MCTP2Q6DN12 878 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 CCT6BQ92526 530 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 CACYBPQ9HB71 228 aaKnown RBP6.14□□□□□ -1.43
PTPRB-202ENST00000334414 LZTFL1Q9NQ48 299 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 CLASP1Q7Z460 1538 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 SYCP2Q9BX26 1530 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 TMEM232C9JQI7 657 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 KIFC3Q9BVG8 833 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 TEX14Q8IWB6 1497 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 CCDC169A6NNP5 214 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms