RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ERICH6Q7L0X2 663 aa33.93■■■■□ 3.02
ATPAF1-201ENST00000329231 MCAMP43121 646 aa33.92■■■■□ 3.02
ATPAF1-201ENST00000329231 CDC42EP5Q6NZY7 148 aa33.92■■■■□ 3.02
ATPAF1-201ENST00000329231 USP2O75604 605 aaPredicted RBP33.91■■■■□ 3.02
ATPAF1-201ENST00000329231 PI16Q6UXB8 463 aa33.91■■■■□ 3.02
ATPAF1-201ENST00000329231 SLC10A4Q96EP9 437 aa33.91■■■■□ 3.02
ATPAF1-201ENST00000329231 CSRNP1Q96S65 589 aa33.91■■■■□ 3.02
ATPAF1-201ENST00000329231 CDAN1Q8IWY9 1227 aa33.9■■■■□ 3.02
ATPAF1-201ENST00000329231 GAKO14976 1311 aa33.89■■■■□ 3.02
ATPAF1-201ENST00000329231 EAF2Q96CJ1 260 aaPredicted RBP33.89■■■■□ 3.02
ATPAF1-201ENST00000329231 HOOK2Q96ED9 719 aa33.89■■■■□ 3.02
ATPAF1-201ENST00000329231 FAM163AQ96GL9 167 aaPredicted RBP33.89■■■■□ 3.02
ATPAF1-201ENST00000329231 USP40Q9NVE5 1235 aa33.89■■■■□ 3.02
ATPAF1-201ENST00000329231 SIRT2Q8IXJ6 389 aa33.88■■■■□ 3.01
ATPAF1-201ENST00000329231 ANKRD13AQ8IZ07 590 aa33.88■■■■□ 3.01
ATPAF1-201ENST00000329231 ZNF512BQ96KM6 892 aaPredicted RBP33.88■■■■□ 3.01
ATPAF1-201ENST00000329231 CCDC8Q9H0W5 538 aaPredicted RBP33.88■■■■□ 3.01
ATPAF1-201ENST00000329231 TSKSQ9UJT2 592 aa33.88■■■■□ 3.01
ATPAF1-201ENST00000329231 DBNLQ9UJU6 430 aaKnown RBP33.88■■■■□ 3.01
ATPAF1-201ENST00000329231 MECOMQ03112 1051 aa33.87■■■■□ 3.01
ATPAF1-201ENST00000329231 TBC1D9Q6ZT07 1266 aa33.87■■■■□ 3.01
ATPAF1-201ENST00000329231 TNS4Q8IZW8 715 aa33.87■■■■□ 3.01
ATPAF1-201ENST00000329231 SAGE1Q9NXZ1 904 aa33.87■■■■□ 3.01
ATPAF1-201ENST00000329231 RPAP1Q9BWH6 1393 aaPredicted RBP33.86■■■■□ 3.01
ATPAF1-201ENST00000329231 GSTO1P78417 241 aa33.86■■■■□ 3.01
ATPAF1-201ENST00000329231 SPRYD7Q5W111 196 aa33.86■■■■□ 3.01
ATPAF1-201ENST00000329231 FAM151AQ8WW52 585 aa33.86■■■■□ 3.01
ATPAF1-201ENST00000329231 CLMNQ96JQ2 1002 aa33.86■■■■□ 3.01
ATPAF1-201ENST00000329231 MKRN3Q13064 507 aaKnown RBP33.85■■■■□ 3.01
ATPAF1-201ENST00000329231 RHPN1Q8TCX5 695 aa33.85■■■■□ 3.01
ATPAF1-201ENST00000329231 TLR7Q9NYK1 1049 aaKnown RBP33.85■■■■□ 3.01
ATPAF1-201ENST00000329231 RAI14Q9P0K7 980 aa33.85■■■■□ 3.01
ATPAF1-201ENST00000329231 LRP2BPQ9P2M1 347 aa33.85■■■■□ 3.01
ATPAF1-201ENST00000329231 MROH7-TTC4A0A0A0MT08 1334 aa33.84■■■■□ 3.01
ATPAF1-201ENST00000329231 LDHCP07864 332 aa33.84■■■■□ 3.01
ATPAF1-201ENST00000329231 AACSQ86V21 672 aa33.84■■■■□ 3.01
ATPAF1-201ENST00000329231 SNRKQ9NRH2 765 aa33.84■■■■□ 3.01
ATPAF1-201ENST00000329231 RNF186Q9NXI6 227 aa33.84■■■■□ 3.01
ATPAF1-201ENST00000329231 ZBTB4Q9P1Z0 1013 aaPredicted RBP33.84■■■■□ 3.01
ATPAF1-201ENST00000329231 MYH2Q9UKX2 1941 aa33.83■■■■□ 3.01
ATPAF1-201ENST00000329231 TCP10Q12799 353 aa33.83■■■■□ 3.01
ATPAF1-201ENST00000329231 NFIAQ12857 509 aa33.83■■■■□ 3.01
ATPAF1-201ENST00000329231 NSUN4Q96CB9 384 aaKnown RBP33.83■■■■□ 3.01
ATPAF1-201ENST00000329231 KIF1BPQ96EK5 621 aa33.83■■■■□ 3.01
ATPAF1-201ENST00000329231 ZBTB48P10074 688 aaPredicted RBP33.82■■■■□ 3
ATPAF1-201ENST00000329231 BTDP43251 543 aa33.82■■■■□ 3
ATPAF1-201ENST00000329231 SREBF2Q12772 1141 aa33.82■■■■□ 3
ATPAF1-201ENST00000329231 IFFO2Q5TF58 517 aa33.82■■■■□ 3
ATPAF1-201ENST00000329231 RAB11FIP3O75154 756 aa33.81■■■■□ 3
ATPAF1-201ENST00000329231 TRPA1O75762 1119 aa33.81■■■■□ 3
ATPAF1-201ENST00000329231 TM4SF4P48230 202 aa33.81■■■■□ 3
ATPAF1-201ENST00000329231 MAP3K9P80192 1104 aa33.81■■■■□ 3
ATPAF1-201ENST00000329231 DCAF15Q66K64 600 aa33.81■■■■□ 3
ATPAF1-201ENST00000329231 WNK4Q96J92 1243 aa33.81■■■■□ 3
ATPAF1-201ENST00000329231 IDI2Q9BXS1 227 aa33.81■■■■□ 3
ATPAF1-201ENST00000329231 IL1RAPL2Q9NP60 686 aa33.81■■■■□ 3
ATPAF1-201ENST00000329231 FAM198AQ9UFP1 575 aa33.81■■■■□ 3
ATPAF1-201ENST00000329231 GPR75-ASB3A0A0A6YYF3 556 aa33.8■■■■□ 3
ATPAF1-201ENST00000329231 CLASRPQ8N2M8 674 aaKnown RBP33.8■■■■□ 3
ATPAF1-201ENST00000329231 ZNF384Q8TF68 577 aa33.8■■■■□ 3
ATPAF1-201ENST00000329231 APBB1O00213 710 aa33.79■■■■□ 3
ATPAF1-201ENST00000329231 DDX55Q8NHQ9 600 aaKnown RBP eCLIP33.79■■■■□ 3
ATPAF1-201ENST00000329231 CSADQ9Y600 493 aa33.79■■■■□ 3
ATPAF1-201ENST00000329231 IGSF3O75054 1194 aa33.78■■■■□ 3
ATPAF1-201ENST00000329231 ENTPD3O75355 529 aa33.78■■■■□ 3
ATPAF1-201ENST00000329231 CYP2E1P05181 493 aaPredicted RBP33.78■■■■□ 3
ATPAF1-201ENST00000329231 PPP1R3FQ6ZSY5 799 aaPredicted RBP33.78■■■■□ 3
ATPAF1-201ENST00000329231 AKAP11Q9UKA4 1901 aa33.77■■■■□ 3
ATPAF1-201ENST00000329231 MANSC4A6NHS7 340 aaPredicted RBP33.77■■■■□ 3
ATPAF1-201ENST00000329231 ZAP70P43403 619 aa33.77■■■■□ 3
ATPAF1-201ENST00000329231 RGS3P49796 1198 aa33.77■■■■□ 3
ATPAF1-201ENST00000329231 ELP3Q9H9T3 547 aa33.77■■■■□ 3
ATPAF1-201ENST00000329231 MAP4K4O95819 1239 aaPredicted RBP33.76■■■□□ 2.99
ATPAF1-201ENST00000329231 RRP1P56182 461 aaKnown RBP33.76■■■□□ 2.99
ATPAF1-201ENST00000329231 INHBEP58166 350 aa33.76■■■□□ 2.99
ATPAF1-201ENST00000329231 ZNF341Q9BYN7 854 aa33.76■■■□□ 2.99
ATPAF1-201ENST00000329231 VGLL4Q14135 290 aa33.75■■■□□ 2.99
ATPAF1-201ENST00000329231 NAA16Q6N069 864 aaPredicted RBP33.75■■■□□ 2.99
ATPAF1-201ENST00000329231 WRNIP1Q96S55 665 aa33.75■■■□□ 2.99
ATPAF1-201ENST00000329231 WDHD1O75717 1129 aaPredicted RBP33.74■■■□□ 2.99
ATPAF1-201ENST00000329231 IFIT2P09913 472 aaKnown RBP33.74■■■□□ 2.99
ATPAF1-201ENST00000329231 RHBDL3P58872 404 aa33.74■■■□□ 2.99
ATPAF1-201ENST00000329231 MIGA2Q7L4E1 593 aa33.74■■■□□ 2.99
ATPAF1-201ENST00000329231 OPTNQ96CV9 577 aa33.74■■■□□ 2.99
ATPAF1-201ENST00000329231 NOL10Q9BSC4 688 aaKnown RBP33.74■■■□□ 2.99
ATPAF1-201ENST00000329231 RFX7Q2KHR2 1363 aa33.73■■■□□ 2.99
ATPAF1-201ENST00000329231 ZFPM1Q8IX07 1006 aa33.73■■■□□ 2.99
ATPAF1-201ENST00000329231 GJA5P36382 358 aa33.72■■■□□ 2.99
ATPAF1-201ENST00000329231 PIH1D3Q9NQM4 214 aaKnown RBP33.72■■■□□ 2.99
ATPAF1-201ENST00000329231 OTOFQ9HC10 1997 aa33.72■■■□□ 2.99
ATPAF1-201ENST00000329231 NPM3O75607 178 aaKnown RBP33.71■■■□□ 2.99
ATPAF1-201ENST00000329231 ZSCAN29Q8IWY8 852 aaPredicted RBP33.71■■■□□ 2.99
ATPAF1-201ENST00000329231 BAG3O95817 575 aa33.7■■■□□ 2.99
ATPAF1-201ENST00000329231 PICALMQ13492 652 aa33.7■■■□□ 2.99
ATPAF1-201ENST00000329231 DDX4Q9NQI0 724 aaKnown RBP33.7■■■□□ 2.99
ATPAF1-201ENST00000329231 ALDH1A1P00352 501 aa33.69■■■□□ 2.98
ATPAF1-201ENST00000329231 BCL11AQ9H165 835 aa33.69■■■□□ 2.98
ATPAF1-201ENST00000329231 PLCG2P16885 1265 aa33.68■■■□□ 2.98
ATPAF1-201ENST00000329231 ZKSCAN4Q969J2 545 aaPredicted RBP33.68■■■□□ 2.98
ATPAF1-201ENST00000329231 SNCAIPQ9Y6H5 919 aa33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms