RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 DCAF5Q96JK2 942 aa19.26■□□□□ 0.67
SSH1-201ENST00000326470 ATG3Q9NT62 314 aa19.26■□□□□ 0.67
SSH1-201ENST00000326470 SEC31AO94979 1220 aaKnown RBP19.25■□□□□ 0.67
SSH1-201ENST00000326470 MAP3K9P80192 1104 aa19.25■□□□□ 0.67
SSH1-201ENST00000326470 GPR161Q8N6U8 529 aaKnown RBP19.25■□□□□ 0.67
SSH1-201ENST00000326470 ALG1Q9BT22 464 aa19.25■□□□□ 0.67
SSH1-201ENST00000326470 INTS13Q9NVM9 706 aa19.25■□□□□ 0.67
SSH1-201ENST00000326470 NLRP2Q9NX02 1062 aa19.25■□□□□ 0.67
SSH1-201ENST00000326470 CPDO75976 1380 aa19.25■□□□□ 0.67
SSH1-201ENST00000326470 TULP2O00295 520 aa19.25■□□□□ 0.67
SSH1-201ENST00000326470 ZBTB22O15209 634 aa19.25■□□□□ 0.67
SSH1-201ENST00000326470 TBX2Q13207 712 aaPredicted RBP19.25■□□□□ 0.67
SSH1-201ENST00000326470 METTL16Q86W50 562 aaKnown RBP19.25■□□□□ 0.67
SSH1-201ENST00000326470 MAP3K14Q99558 947 aa19.25■□□□□ 0.67
SSH1-201ENST00000326470 ZNF213O14771 459 aa19.24■□□□□ 0.67
SSH1-201ENST00000326470 TBC1D8O95759 1140 aa19.24■□□□□ 0.67
SSH1-201ENST00000326470 CASQ1P31415 396 aa19.24■□□□□ 0.67
SSH1-201ENST00000326470 HNRNPH2P55795 449 aaKnown RBP19.24■□□□□ 0.67
SSH1-201ENST00000326470 APPBP2Q92624 585 aa19.24■□□□□ 0.67
SSH1-201ENST00000326470 ZMYM6O95789 1325 aa19.24■□□□□ 0.67
SSH1-201ENST00000326470 DDX60Q8IY21 1712 aaKnown RBP19.24■□□□□ 0.67
SSH1-201ENST00000326470 CCDC102BQ68D86 513 aa19.24■□□□□ 0.67
SSH1-201ENST00000326470 KRT40Q6A162 431 aa19.24■□□□□ 0.67
SSH1-201ENST00000326470 CC2D1AQ6P1N0 951 aaPredicted RBP19.24■□□□□ 0.67
SSH1-201ENST00000326470 FOXP4Q8IVH2 680 aaPredicted RBP19.24■□□□□ 0.67
SSH1-201ENST00000326470 AIFM3Q96NN9 605 aa19.24■□□□□ 0.67
SSH1-201ENST00000326470 BAG1Q99933 345 aaPredicted RBP19.24■□□□□ 0.67
SSH1-201ENST00000326470 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.24■□□□□ 0.67
SSH1-201ENST00000326470 CEP126Q9P2H0 1117 aa19.24■□□□□ 0.67
SSH1-201ENST00000326470 RGPD5Q99666 1765 aa19.23■□□□□ 0.67
SSH1-201ENST00000326470 POLR3GO15318 223 aaPredicted RBP19.23■□□□□ 0.67
SSH1-201ENST00000326470 STX10O60499 249 aa19.23■□□□□ 0.67
SSH1-201ENST00000326470 SASH3O75995 380 aa19.23■□□□□ 0.67
SSH1-201ENST00000326470 TTC39AQ5SRH9 613 aa19.23■□□□□ 0.67
SSH1-201ENST00000326470 KRBA2Q6ZNG9 492 aa19.23■□□□□ 0.67
SSH1-201ENST00000326470 PUS3Q9BZE2 481 aaKnown RBP19.23■□□□□ 0.67
SSH1-201ENST00000326470 MRFAP1Q9Y605 127 aa19.23■□□□□ 0.67
SSH1-201ENST00000326470 C4AP0C0L4 1744 aa19.23■□□□□ 0.67
SSH1-201ENST00000326470 C4BP0C0L5 1744 aa19.23■□□□□ 0.67
SSH1-201ENST00000326470 CUTAO60888 179 aa19.23■□□□□ 0.67
SSH1-201ENST00000326470 CDKL5O76039 1030 aa19.23■□□□□ 0.67
SSH1-201ENST00000326470 GNG11P61952 73 aa19.23■□□□□ 0.67
SSH1-201ENST00000326470 LONRF3Q496Y0 759 aa19.23■□□□□ 0.67
SSH1-201ENST00000326470 RSRC2Q7L4I2 434 aaKnown RBP19.23■□□□□ 0.67
SSH1-201ENST00000326470 FAM177A1Q8N128 213 aaPredicted RBP19.23■□□□□ 0.67
SSH1-201ENST00000326470 WDR24Q96S15 920 aa19.23■□□□□ 0.67
SSH1-201ENST00000326470 PUS7LQ9H0K6 701 aaKnown RBP19.23■□□□□ 0.67
SSH1-201ENST00000326470 PCDHA5Q9Y5H7 936 aa19.23■□□□□ 0.67
SSH1-201ENST00000326470 MEGF6O75095 1541 aa19.23■□□□□ 0.67
SSH1-201ENST00000326470 NBPF26B4DH59 902 aa19.22■□□□□ 0.67
SSH1-201ENST00000326470 PTPN21Q16825 1174 aa19.22■□□□□ 0.67
SSH1-201ENST00000326470 NBPF14Q5TI25 921 aa19.22■□□□□ 0.67
SSH1-201ENST00000326470 NBPF10Q6P3W6 841 aaKnown RBP19.22■□□□□ 0.67
SSH1-201ENST00000326470 ELOA2Q8IYF1 753 aaPredicted RBP19.22■□□□□ 0.67
SSH1-201ENST00000326470 NBPF15Q8N660 670 aa19.22■□□□□ 0.67
SSH1-201ENST00000326470 CNNM3Q8NE01 707 aa19.22■□□□□ 0.67
SSH1-201ENST00000326470 BBXQ8WY36 941 aaPredicted RBP19.22■□□□□ 0.67
SSH1-201ENST00000326470 CLIC6Q96NY7 704 aa19.22■□□□□ 0.67
SSH1-201ENST00000326470 ANGEL1Q9UNK9 670 aaKnown RBP19.22■□□□□ 0.67
SSH1-201ENST00000326470 GTF2E1P29083 439 aaPredicted RBP19.22■□□□□ 0.67
SSH1-201ENST00000326470 ZC3H6P61129 1189 aaKnown RBP19.22■□□□□ 0.67
SSH1-201ENST00000326470 MST1RQ04912 1400 aa19.22■□□□□ 0.67
SSH1-201ENST00000326470 PPP2R3AQ06190 1150 aa19.22■□□□□ 0.67
SSH1-201ENST00000326470 PDE4BQ07343 736 aa19.22■□□□□ 0.67
SSH1-201ENST00000326470 CADPS2Q86UW7 1296 aa19.22■□□□□ 0.67
SSH1-201ENST00000326470 EPC1Q9H2F5 836 aa19.22■□□□□ 0.67
SSH1-201ENST00000326470 KCNH3Q9ULD8 1083 aa19.22■□□□□ 0.67
SSH1-201ENST00000326470 CYP27B1O15528 508 aa19.21■□□□□ 0.67
SSH1-201ENST00000326470 BMP6P22004 513 aa19.21■□□□□ 0.67
SSH1-201ENST00000326470 METAP2P50579 478 aaKnown RBP eCLIP19.21■□□□□ 0.67
SSH1-201ENST00000326470 GNL2Q13823 731 aaKnown RBP19.21■□□□□ 0.67
SSH1-201ENST00000326470 TTLL7Q6ZT98 887 aa19.21■□□□□ 0.67
SSH1-201ENST00000326470 CCDC191Q8NCU4 936 aa19.21■□□□□ 0.67
SSH1-201ENST00000326470 GPAA1O43292 621 aa19.21■□□□□ 0.67
SSH1-201ENST00000326470 CDC27P30260 824 aa19.21■□□□□ 0.67
SSH1-201ENST00000326470 TXLNBQ8N3L3 684 aa19.21■□□□□ 0.67
SSH1-201ENST00000326470 TC2NQ8N9U0 490 aa19.21■□□□□ 0.67
SSH1-201ENST00000326470 XAGE2Q96GT9 111 aa19.21■□□□□ 0.67
SSH1-201ENST00000326470 TRPM3Q9HCF6 1732 aaPredicted RBP19.2■□□□□ 0.66
SSH1-201ENST00000326470 OAS2P29728 719 aaKnown RBP19.2■□□□□ 0.66
SSH1-201ENST00000326470 ADORA1P30542 326 aa19.2■□□□□ 0.66
SSH1-201ENST00000326470 TRDNQ13061 729 aa19.2■□□□□ 0.66
SSH1-201ENST00000326470 CPLX2Q6PUV4 134 aaKnown RBP19.2■□□□□ 0.66
SSH1-201ENST00000326470 RABGGTAQ92696 567 aa19.2■□□□□ 0.66
SSH1-201ENST00000326470 KIFC2Q96AC6 838 aa19.2■□□□□ 0.66
SSH1-201ENST00000326470 ARFGAP3Q9NP61 516 aa19.2■□□□□ 0.66
SSH1-201ENST00000326470 AKAP2Q9Y2D5 859 aa19.2■□□□□ 0.66
SSH1-201ENST00000326470 CABP4P57796 275 aa19.2■□□□□ 0.66
SSH1-201ENST00000326470 MDM2Q00987 491 aaPredicted RBP19.2■□□□□ 0.66
SSH1-201ENST00000326470 SMC1AQ14683 1233 aaKnown RBP19.2■□□□□ 0.66
SSH1-201ENST00000326470 SPECC1LQ69YQ0 1117 aa19.2■□□□□ 0.66
SSH1-201ENST00000326470 TOGARAM2Q6ZUX3 1019 aa19.2■□□□□ 0.66
SSH1-201ENST00000326470 PDILTQ8N807 584 aa19.2■□□□□ 0.66
SSH1-201ENST00000326470 ZNF18P17022 549 aa19.19■□□□□ 0.66
SSH1-201ENST00000326470 ZAP70P43403 619 aa19.19■□□□□ 0.66
SSH1-201ENST00000326470 SCARF1Q14162 830 aa19.19■□□□□ 0.66
SSH1-201ENST00000326470 HSP90AB3PQ58FF7 597 aa19.19■□□□□ 0.66
SSH1-201ENST00000326470 NBPF3Q9H094 633 aa19.19■□□□□ 0.66
SSH1-201ENST00000326470 TJP1Q07157 1748 aa19.19■□□□□ 0.66
SSH1-201ENST00000326470 GLI3P10071 1580 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms