RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 CDC5LQ99459 802 aaKnown RBP14.03□□□□□ -0.16
NCL-201ENST00000322723 ANGEL1Q9UNK9 670 aaKnown RBP14.03□□□□□ -0.16
NCL-201ENST00000322723 C3orf67Q6ZVT6 689 aa14.03□□□□□ -0.16
NCL-201ENST00000322723 BSDC1Q9NW68 430 aaPredicted RBP14.03□□□□□ -0.16
NCL-201ENST00000322723 KAT6BQ8WYB5 2073 aa14.03□□□□□ -0.16
NCL-201ENST00000322723 WASHC4Q2M389 1173 aa14.03□□□□□ -0.16
NCL-201ENST00000322723 USP28Q96RU2 1077 aa14.03□□□□□ -0.16
NCL-201ENST00000322723 ZNF330Q9Y3S2 320 aaPredicted RBP14.03□□□□□ -0.16
NCL-201ENST00000322723 BRWD3Q6RI45 1802 aa14.03□□□□□ -0.16
NCL-201ENST00000322723 KCNQ2O43526 872 aa14.02□□□□□ -0.16
NCL-201ENST00000322723 CCDC192P0DO97 292 aa14.02□□□□□ -0.16
NCL-201ENST00000322723 GNAT2P19087 354 aa14.02□□□□□ -0.16
NCL-201ENST00000322723 TYRO3Q06418 890 aa14.02□□□□□ -0.16
NCL-201ENST00000322723 CHRNDQ07001 517 aa14.02□□□□□ -0.16
NCL-201ENST00000322723 FAM200AQ8TCP9 573 aa14.02□□□□□ -0.16
NCL-201ENST00000322723 DACT1Q9NYF0 836 aa14.02□□□□□ -0.16
NCL-201ENST00000322723 BRAPQ7Z569 592 aa14.02□□□□□ -0.17
NCL-201ENST00000322723 IFNL3Q8IZI9 196 aa14.02□□□□□ -0.17
NCL-201ENST00000322723 YEATS4O95619 227 aa14.02□□□□□ -0.17
NCL-201ENST00000322723 CAVIN2O95810 425 aa14.02□□□□□ -0.17
NCL-201ENST00000322723 UBE4AQ14139 1066 aa14.02□□□□□ -0.17
NCL-201ENST00000322723 CHST3Q7LGC8 479 aa14.02□□□□□ -0.17
NCL-201ENST00000322723 TRERF1Q96PN7 1200 aa14.02□□□□□ -0.17
NCL-201ENST00000322723 ZNF652Q9Y2D9 606 aa14.02□□□□□ -0.17
NCL-201ENST00000322723 DDX11Q96FC9 970 aa14.01□□□□□ -0.17
NCL-201ENST00000322723 CCT2P78371 535 aaKnown RBP14.01□□□□□ -0.17
NCL-201ENST00000322723 APOA5Q6Q788 366 aa14.01□□□□□ -0.17
NCL-201ENST00000322723 LINC00301Q8NCQ3 95 aa14.01□□□□□ -0.17
NCL-201ENST00000322723 TFIP11Q9UBB9 837 aaKnown RBP14.01□□□□□ -0.17
NCL-201ENST00000322723 ANKRD31Q8N7Z5 1873 aa14.01□□□□□ -0.17
NCL-201ENST00000322723 KLF18A0A0U1RQI7 1052 aa14.01□□□□□ -0.17
NCL-201ENST00000322723 DHX16O60231 1041 aaKnown RBP14.01□□□□□ -0.17
NCL-201ENST00000322723 KIF23Q02241 960 aaPredicted RBP14.01□□□□□ -0.17
NCL-201ENST00000322723 FMR1NBQ8N0W7 255 aaPredicted RBP14.01□□□□□ -0.17
NCL-201ENST00000322723 ZNF384Q8TF68 577 aa14.01□□□□□ -0.17
NCL-201ENST00000322723 ACSBG1Q96GR2 724 aa14.01□□□□□ -0.17
NCL-201ENST00000322723 ZNF396Q96N95 335 aaPredicted RBP14.01□□□□□ -0.17
NCL-201ENST00000322723 RIOK1Q9BRS2 568 aaKnown RBP14.01□□□□□ -0.17
NCL-201ENST00000322723 NIP7Q9Y221 180 aaKnown RBP eCLIP14.01□□□□□ -0.179e-58■■□□□ 13.6
NCL-201ENST00000322723 HAND2P61296 217 aa14□□□□□ -0.17
NCL-201ENST00000322723 PLA2G4DQ86XP0 818 aa14□□□□□ -0.17
NCL-201ENST00000322723 FBXO33Q7Z6M2 555 aa14□□□□□ -0.17
NCL-201ENST00000322723 SPTLC3Q9NUV7 552 aa14□□□□□ -0.17
NCL-201ENST00000322723 NARFQ9UHQ1 456 aa14□□□□□ -0.17
NCL-201ENST00000322723 KIF28PB7ZC32 967 aa14□□□□□ -0.17
NCL-201ENST00000322723 SEMA3EO15041 775 aa14□□□□□ -0.17
NCL-201ENST00000322723 CTAGE5O15320 804 aa14□□□□□ -0.17
NCL-201ENST00000322723 ADAMTS2O95450 1211 aa14□□□□□ -0.17
NCL-201ENST00000322723 U2AF2P26368 475 aaKnown RBP eCLIP14□□□□□ -0.171e-8■■■□□ 17.1
NCL-201ENST00000322723 IQCB1Q15051 598 aa14□□□□□ -0.17
NCL-201ENST00000322723 TSC1Q92574 1164 aa14□□□□□ -0.17
NCL-201ENST00000322723 SYTL4Q96C24 671 aaPredicted RBP14□□□□□ -0.17
NCL-201ENST00000322723 ONECUT3O60422 494 aaPredicted RBP13.99□□□□□ -0.17
NCL-201ENST00000322723 TM4SF1P30408 202 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 MAP3K12Q12852 859 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 ERFEQ4G0M1 354 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 ADALQ6DHV7 355 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 SARM1Q6SZW1 724 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 NBPF11Q86T75 865 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 SENP2Q9HC62 589 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 H3BQV1 296 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 RANBP6O60518 1105 aaKnown RBP13.99□□□□□ -0.17
NCL-201ENST00000322723 ADCY5O95622 1261 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 CDC27P30260 824 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 IFFO2Q5TF58 517 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 ADGRA1Q86SQ6 560 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 RGPD3A6NKT7 1758 aaPredicted RBP13.99□□□□□ -0.17
NCL-201ENST00000322723 RGPD4Q7Z3J3 1758 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 GOLGA8BA8MQT2 603 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 RPS6KA4O75676 772 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 CDC25BP30305 580 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 IGHMBP2P38935 993 aaKnown RBP13.99□□□□□ -0.17
NCL-201ENST00000322723 AXDND1Q5T1B0 1012 aaPredicted RBP13.99□□□□□ -0.17
NCL-201ENST00000322723 MAP3K14Q99558 947 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 CNNM2Q9H8M5 875 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 BCAMP50895 628 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 LCORLQ8N3X6 602 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 MAGEB6Q8N7X4 407 aa13.99□□□□□ -0.17
NCL-201ENST00000322723 FTOQ9C0B1 505 aaKnown RBP eCLIP13.99□□□□□ -0.173e-13■■□□□ 14.1
NCL-201ENST00000322723 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.99□□□□□ -0.17
NCL-201ENST00000322723 FAM160A1Q05DH4 1040 aa13.98□□□□□ -0.17
NCL-201ENST00000322723 AKNAD1Q5T1N1 836 aa13.98□□□□□ -0.17
NCL-201ENST00000322723 HELBQ8NG08 1087 aaPredicted RBP13.98□□□□□ -0.17
NCL-201ENST00000322723 SPATA31A6Q5VVP1 1343 aa13.98□□□□□ -0.17
NCL-201ENST00000322723 MBD4O95243 580 aa13.98□□□□□ -0.17
NCL-201ENST00000322723 PTPAQ15257 358 aa13.98□□□□□ -0.17
NCL-201ENST00000322723 SEC23AQ15436 765 aa13.98□□□□□ -0.17
NCL-201ENST00000322723 ZNF592Q92610 1267 aa13.98□□□□□ -0.17
NCL-201ENST00000322723 CBX8Q9HC52 389 aa13.98□□□□□ -0.17
NCL-201ENST00000322723 MYSM1Q5VVJ2 828 aa13.98□□□□□ -0.17
NCL-201ENST00000322723 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.98□□□□□ -0.17
NCL-201ENST00000322723 ELOA2Q8IYF1 753 aaPredicted RBP13.98□□□□□ -0.17
NCL-201ENST00000322723 BPIFA3Q9BQP9 254 aa13.98□□□□□ -0.17
NCL-201ENST00000322723 TNMDQ9H2S6 317 aa13.98□□□□□ -0.17
NCL-201ENST00000322723 PCDHA7Q9UN72 937 aa13.98□□□□□ -0.17
NCL-201ENST00000322723 MINPP1Q9UNW1 487 aa13.98□□□□□ -0.17
NCL-201ENST00000322723 HPSEQ9Y251 543 aa13.98□□□□□ -0.17
NCL-201ENST00000322723 MPHOSPH8Q99549 860 aa13.97□□□□□ -0.17
NCL-201ENST00000322723 SNAP23O00161 211 aa13.97□□□□□ -0.17
NCL-201ENST00000322723 TBC1D9BQ66K14 1250 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms