RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 EXOC4Q96A65 974 aa20.53■□□□□ 0.88
PRKCB-202ENST00000321728 KIFC2Q96AC6 838 aa20.53■□□□□ 0.88
PRKCB-202ENST00000321728 ZBTB9Q96C00 473 aa20.53■□□□□ 0.88
PRKCB-202ENST00000321728 ZNF496Q96IT1 587 aaPredicted RBP20.53■□□□□ 0.88
PRKCB-202ENST00000321728 CLIC6Q96NY7 704 aa20.53■□□□□ 0.88
PRKCB-202ENST00000321728 IMMTQ16891 758 aaKnown RBP20.53■□□□□ 0.88
PRKCB-202ENST00000321728 KCNH5Q8NCM2 988 aa20.53■□□□□ 0.88
PRKCB-202ENST00000321728 HPSEQ9Y251 543 aa20.53■□□□□ 0.88
PRKCB-202ENST00000321728 H3BQF6 201 aa20.52■□□□□ 0.88
PRKCB-202ENST00000321728 ARHGEF25Q86VW2 580 aa20.52■□□□□ 0.88
PRKCB-202ENST00000321728 FBXL16Q8N461 479 aa20.52■□□□□ 0.88
PRKCB-202ENST00000321728 CNNM3Q8NE01 707 aa20.52■□□□□ 0.88
PRKCB-202ENST00000321728 GOLGA5Q8TBA6 731 aa20.52■□□□□ 0.88
PRKCB-202ENST00000321728 C19orf44Q9H6X5 657 aa20.52■□□□□ 0.88
PRKCB-202ENST00000321728 LCMT1Q9UIC8 334 aa20.52■□□□□ 0.88
PRKCB-202ENST00000321728 MYO1CO00159 1063 aa20.52■□□□□ 0.88
PRKCB-202ENST00000321728 TRIM66O15016 1216 aa20.52■□□□□ 0.88
PRKCB-202ENST00000321728 JAKMIP3Q5VZ66 844 aa20.52■□□□□ 0.88
PRKCB-202ENST00000321728 METTL16Q86W50 562 aaKnown RBP20.52■□□□□ 0.88
PRKCB-202ENST00000321728 AIFM3Q96NN9 605 aa20.52■□□□□ 0.88
PRKCB-202ENST00000321728 PCDHA5Q9Y5H7 936 aa20.52■□□□□ 0.88
PRKCB-202ENST00000321728 OVOS2A0A0G2JMS6 1433 aa20.52■□□□□ 0.88
PRKCB-202ENST00000321728 MYO1BO43795 1136 aa20.51■□□□□ 0.87
PRKCB-202ENST00000321728 PDE4BQ07343 736 aa20.51■□□□□ 0.87
PRKCB-202ENST00000321728 WASHC4Q2M389 1173 aa20.51■□□□□ 0.87
PRKCB-202ENST00000321728 LONRF3Q496Y0 759 aa20.51■□□□□ 0.87
PRKCB-202ENST00000321728 CCDC102BQ68D86 513 aa20.51■□□□□ 0.87
PRKCB-202ENST00000321728 SPECC1LQ69YQ0 1117 aa20.51■□□□□ 0.87
PRKCB-202ENST00000321728 TC2NQ8N9U0 490 aa20.51■□□□□ 0.87
PRKCB-202ENST00000321728 OSBP2Q969R2 916 aa20.51■□□□□ 0.87
PRKCB-202ENST00000321728 RSPH14Q9UHP6 348 aa20.51■□□□□ 0.87
PRKCB-202ENST00000321728 USP54Q70EL1 1684 aa20.51■□□□□ 0.87
PRKCB-202ENST00000321728 CCDC151A5D8V7 595 aa20.51■□□□□ 0.87
PRKCB-202ENST00000321728 CDC27P30260 824 aa20.51■□□□□ 0.87
PRKCB-202ENST00000321728 TBX2Q13207 712 aaPredicted RBP20.51■□□□□ 0.87
PRKCB-202ENST00000321728 MCM6Q14566 821 aa20.51■□□□□ 0.87
PRKCB-202ENST00000321728 RALYLQ86SE5 291 aaKnown RBP20.51■□□□□ 0.87
PRKCB-202ENST00000321728 VPS37DQ86XT2 251 aa20.51■□□□□ 0.87
PRKCB-202ENST00000321728 ZFP91Q96JP5 570 aaPredicted RBP20.51■□□□□ 0.87
PRKCB-202ENST00000321728 FKBP4Q02790 459 aaKnown RBP eCLIP20.5■□□□□ 0.87
PRKCB-202ENST00000321728 FOXP4Q8IVH2 680 aaPredicted RBP20.5■□□□□ 0.87
PRKCB-202ENST00000321728 ALG1Q9BT22 464 aa20.5■□□□□ 0.87
PRKCB-202ENST00000321728 IRX2Q9BZI1 471 aaPredicted RBP20.5■□□□□ 0.87
PRKCB-202ENST00000321728 PPP6R2O75170 966 aa20.5■□□□□ 0.87
PRKCB-202ENST00000321728 CHMP4BP1P59074 171 aa20.5■□□□□ 0.87
PRKCB-202ENST00000321728 BRD3Q15059 726 aa20.5■□□□□ 0.87
PRKCB-202ENST00000321728 VPS18Q9P253 973 aa20.5■□□□□ 0.87
PRKCB-202ENST00000321728 PUF60Q9UHX1 559 aaKnown RBP20.5■□□□□ 0.87
PRKCB-202ENST00000321728 RESP18Q5W5W9 173 aa20.49■□□□□ 0.87
PRKCB-202ENST00000321728 PDE11AQ9HCR9 933 aa20.49■□□□□ 0.87
PRKCB-202ENST00000321728 LZTFL1Q9NQ48 299 aa20.49■□□□□ 0.87
PRKCB-202ENST00000321728 PSD3Q9NYI0 1048 aa20.49■□□□□ 0.87
PRKCB-202ENST00000321728 KCNH3Q9ULD8 1083 aa20.49■□□□□ 0.87
PRKCB-202ENST00000321728 BMP6P22004 513 aa20.49■□□□□ 0.87
PRKCB-202ENST00000321728 ATG9AQ7Z3C6 839 aa20.49■□□□□ 0.87
PRKCB-202ENST00000321728 MB21D2Q8IYB1 491 aaPredicted RBP20.49■□□□□ 0.87
PRKCB-202ENST00000321728 NCOA7Q8NI08 942 aa20.49■□□□□ 0.87
PRKCB-202ENST00000321728 NFE2L3Q9Y4A8 694 aa20.49■□□□□ 0.87
PRKCB-202ENST00000321728 FOXN1O15353 648 aa20.48■□□□□ 0.87
PRKCB-202ENST00000321728 FGAP02671 866 aa20.48■□□□□ 0.87
PRKCB-202ENST00000321728 ACTN2P35609 894 aa20.48■□□□□ 0.87
PRKCB-202ENST00000321728 HSP90AB3PQ58FF7 597 aa20.48■□□□□ 0.87
PRKCB-202ENST00000321728 LEKR1Q6ZMV7 388 aa20.48■□□□□ 0.87
PRKCB-202ENST00000321728 MRPL44Q9H9J2 332 aaKnown RBP20.48■□□□□ 0.87
PRKCB-202ENST00000321728 ANTXR2P58335 489 aa20.48■□□□□ 0.87
PRKCB-202ENST00000321728 MTF1Q14872 753 aa20.48■□□□□ 0.87
PRKCB-202ENST00000321728 PTPAQ15257 358 aa20.48■□□□□ 0.87
PRKCB-202ENST00000321728 KRT40Q6A162 431 aa20.48■□□□□ 0.87
PRKCB-202ENST00000321728 CABLES1Q8TDN4 633 aa20.48■□□□□ 0.87
PRKCB-202ENST00000321728 TRMT44Q8IYL2 757 aaKnown RBP20.47■□□□□ 0.87
PRKCB-202ENST00000321728 MAP2K7O14733 419 aa20.47■□□□□ 0.87
PRKCB-202ENST00000321728 CCDC175P0C221 793 aa20.47■□□□□ 0.87
PRKCB-202ENST00000321728 RXRAP19793 462 aa20.47■□□□□ 0.87
PRKCB-202ENST00000321728 SPECC1Q5M775 1068 aa20.47■□□□□ 0.87
PRKCB-202ENST00000321728 SRGAP1Q7Z6B7 1085 aa20.47■□□□□ 0.87
PRKCB-202ENST00000321728 SRLQ86TD4 932 aa20.46■□□□□ 0.87
PRKCB-202ENST00000321728 RAPGEF4Q8WZA2 1011 aa20.46■□□□□ 0.87
PRKCB-202ENST00000321728 ZNF594Q96JF6 807 aaPredicted RBP20.46■□□□□ 0.87
PRKCB-202ENST00000321728 RRP15Q9Y3B9 282 aaKnown RBP20.46■□□□□ 0.87
PRKCB-202ENST00000321728 A0A1B0GUL7 405 aa20.46■□□□□ 0.87
PRKCB-202ENST00000321728 CHRNA2Q15822 529 aa20.46■□□□□ 0.87
PRKCB-202ENST00000321728 CCDC85AQ96PX6 553 aaPredicted RBP20.46■□□□□ 0.87
PRKCB-202ENST00000321728 SOWAHDA6NJG2 315 aa20.45■□□□□ 0.86
PRKCB-202ENST00000321728 CUTAO60888 179 aa20.45■□□□□ 0.86
PRKCB-202ENST00000321728 CSB-PGBD3P0DP91 1061 aa20.45■□□□□ 0.86
PRKCB-202ENST00000321728 IL15P40933 162 aaPredicted RBP20.45■□□□□ 0.86
PRKCB-202ENST00000321728 FMR1Q06787 632 aaKnown RBP eCLIP20.45■□□□□ 0.867e-7■■□□□ 12.7
PRKCB-202ENST00000321728 HDXQ7Z353 690 aa20.45■□□□□ 0.86
PRKCB-202ENST00000321728 PHKBQ93100 1093 aa20.45■□□□□ 0.86
PRKCB-202ENST00000321728 SLC52A2Q9HAB3 445 aa20.45■□□□□ 0.86
PRKCB-202ENST00000321728 HOOK1Q9UJC3 728 aaKnown RBP20.45■□□□□ 0.86
PRKCB-202ENST00000321728 ZNF213O14771 459 aa20.45■□□□□ 0.86
PRKCB-202ENST00000321728 FOXP2O15409 715 aa20.45■□□□□ 0.86
PRKCB-202ENST00000321728 ZNF827Q17R98 1081 aa20.45■□□□□ 0.86
PRKCB-202ENST00000321728 LRRC24Q50LG9 513 aa20.45■□□□□ 0.86
PRKCB-202ENST00000321728 MAP3K14Q99558 947 aa20.45■□□□□ 0.86
PRKCB-202ENST00000321728 RAI14Q9P0K7 980 aa20.45■□□□□ 0.86
PRKCB-202ENST00000321728 AFDNP55196 1824 aaKnown RBP20.45■□□□□ 0.86
PRKCB-202ENST00000321728 FAM237AA0A1B0GTK4 181 aa20.44■□□□□ 0.86
PRKCB-202ENST00000321728 METAP2P50579 478 aaKnown RBP eCLIP20.44■□□□□ 0.862e-6■□□□□ 10.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms