RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 NACAP1Q9BZK3 213 aa8.87□□□□□ -0.99
IFT88-201ENST00000319980 CFAP45Q9UL16 551 aa8.87□□□□□ -0.99
IFT88-201ENST00000319980 COL4A1P02462 1669 aa8.87□□□□□ -0.99
IFT88-201ENST00000319980 CARMIL3Q8ND23 1372 aa8.87□□□□□ -0.99
IFT88-201ENST00000319980 ECM2O94769 699 aaPredicted RBP8.87□□□□□ -0.99
IFT88-201ENST00000319980 LIG1P18858 919 aa8.87□□□□□ -0.99
IFT88-201ENST00000319980 CAMK4Q16566 473 aa8.87□□□□□ -0.99
IFT88-201ENST00000319980 OTUD7BQ6GQQ9 843 aa8.87□□□□□ -0.99
IFT88-201ENST00000319980 FAM196AQ6ZSG2 479 aa8.87□□□□□ -0.99
IFT88-201ENST00000319980 ADGRA1Q86SQ6 560 aa8.87□□□□□ -0.99
IFT88-201ENST00000319980 TOMM22Q9NS69 142 aa8.87□□□□□ -0.99
IFT88-201ENST00000319980 WDR19Q8NEZ3 1342 aa8.87□□□□□ -0.99
IFT88-201ENST00000319980 KDM4AO75164 1064 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 GNAT2P19087 354 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 KLRK1P26718 216 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 ADD1P35611 737 aaKnown RBP8.86□□□□□ -0.99
IFT88-201ENST00000319980 RRP12Q5JTH9 1297 aaKnown RBP8.86□□□□□ -0.99
IFT88-201ENST00000319980 SDR42E1Q8WUS8 393 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 FTOQ9C0B1 505 aaKnown RBP eCLIP8.86□□□□□ -0.99
IFT88-201ENST00000319980 SENP2Q9HC62 589 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 ZSWIM5Q9P217 1185 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 ORC3Q9UBD5 711 aaPredicted RBP8.86□□□□□ -0.99
IFT88-201ENST00000319980 DDX60Q8IY21 1712 aaKnown RBP8.86□□□□□ -0.99
IFT88-201ENST00000319980 CICQ96RK0 1608 aaPredicted RBP8.86□□□□□ -0.99
IFT88-201ENST00000319980 NFXL1Q6ZNB6 911 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 MFSD6Q6ZSS7 791 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 MICU3Q86XE3 530 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 CCDC144CPQ8IYA2 1237 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 BICD2Q8TD16 824 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 PGBD1Q96JS3 809 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 GJB4Q9NTQ9 266 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 DACT1Q9NYF0 836 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 TFCP2L1Q9NZI6 479 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 PNPLA7Q6ZV29 1317 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 COL5A3P25940 1745 aaPredicted RBP8.86□□□□□ -0.99
IFT88-201ENST00000319980 SH2B2O14492 632 aaPredicted RBP8.86□□□□□ -0.99
IFT88-201ENST00000319980 METAP2P50579 478 aaKnown RBP eCLIP8.86□□□□□ -0.99
IFT88-201ENST00000319980 TMEM67Q5HYA8 995 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 AKNAD1Q5T1N1 836 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 IGDCC4Q8TDY8 1250 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 C8orf76Q96K31 380 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 LRRC4BQ9NT99 713 aa8.86□□□□□ -0.99
IFT88-201ENST00000319980 ESPNB1AK53 854 aa8.85□□□□□ -0.99
IFT88-201ENST00000319980 IFIT3O14879 490 aaKnown RBP8.85□□□□□ -0.99
IFT88-201ENST00000319980 APOA5Q6Q788 366 aa8.85□□□□□ -0.99
IFT88-201ENST00000319980 TMEM87BQ96K49 555 aa8.85□□□□□ -0.99
IFT88-201ENST00000319980 MYL10Q9BUA6 226 aa8.85□□□□□ -0.99
IFT88-201ENST00000319980 TACC3Q9Y6A5 838 aa8.85□□□□□ -0.99
IFT88-201ENST00000319980 ZMYM6O95789 1325 aa8.85□□□□□ -0.99
IFT88-201ENST00000319980 MAGEB6P1A0A0J9YX57 407 aa8.85□□□□□ -0.99
IFT88-201ENST00000319980 MINDY4BA8MYZ0 360 aa8.85□□□□□ -0.99
IFT88-201ENST00000319980 POLR3DP05423 398 aaPredicted RBP8.85□□□□□ -0.99
IFT88-201ENST00000319980 NFIXQ14938 502 aa8.85□□□□□ -0.99
IFT88-201ENST00000319980 USP28Q96RU2 1077 aa8.85□□□□□ -0.99
IFT88-201ENST00000319980 ZKSCAN3Q9BRR0 538 aa8.85□□□□□ -0.99
IFT88-201ENST00000319980 NUP62CLQ9H1M0 184 aa8.85□□□□□ -0.99
IFT88-201ENST00000319980 CNNM2Q9H8M5 875 aa8.85□□□□□ -0.99
IFT88-201ENST00000319980 LAMA4Q16363 1823 aa8.85□□□□□ -0.99
IFT88-201ENST00000319980 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.84□□□□□ -0.99
IFT88-201ENST00000319980 NR1I2O75469 434 aa8.84□□□□□ -0.99
IFT88-201ENST00000319980 TM4SF1P30408 202 aa8.84□□□□□ -0.99
IFT88-201ENST00000319980 HIBADHP31937 336 aaKnown RBP8.84□□□□□ -0.99
IFT88-201ENST00000319980 FBXO33Q7Z6M2 555 aa8.84□□□□□ -0.99
IFT88-201ENST00000319980 FBXO18Q8NFZ0 1043 aa8.84□□□□□ -0.99
IFT88-201ENST00000319980 PDLIM2Q96JY6 352 aa8.84□□□□□ -0.99
IFT88-201ENST00000319980 LY9Q9HBG7 655 aa8.84□□□□□ -0.99
IFT88-201ENST00000319980 ZBTB43O43298 467 aa8.84□□□□□ -0.99
IFT88-201ENST00000319980 CDC27P30260 824 aa8.84□□□□□ -0.99
IFT88-201ENST00000319980 PHKBQ93100 1093 aa8.84□□□□□ -0.99
IFT88-201ENST00000319980 KRT23Q9C075 422 aa8.84□□□□□ -0.99
IFT88-201ENST00000319980 BCL11BQ9C0K0 894 aaPredicted RBP8.84□□□□□ -0.99
IFT88-201ENST00000319980 ANKRD2Q9GZV1 360 aa8.84□□□□□ -0.99
IFT88-201ENST00000319980 JAG2Q9Y219 1238 aa8.84□□□□□ -0.99
IFT88-201ENST00000319980 SLC12A7Q9Y666 1083 aa8.84□□□□□ -0.99
IFT88-201ENST00000319980 MYO5AQ9Y4I1 1855 aaKnown RBP8.84□□□□□ -0.99
IFT88-201ENST00000319980 SMIM22K7EJ46 135 aa8.84□□□□□ -0.99
IFT88-201ENST00000319980 DYNLL1P63167 89 aaKnown RBP8.84□□□□□ -0.99
IFT88-201ENST00000319980 CHAF1AQ13111 956 aaPredicted RBP8.84□□□□□ -0.99
IFT88-201ENST00000319980 TXNRD3Q86VQ6 643 aa8.84□□□□□ -0.99
IFT88-201ENST00000319980 CKAP2LQ8IYA6 745 aa8.84□□□□□ -0.99
IFT88-201ENST00000319980 CNBD1Q8NA66 436 aa8.84□□□□□ -0.99
IFT88-201ENST00000319980 ZNF396Q96N95 335 aaPredicted RBP8.84□□□□□ -0.99
IFT88-201ENST00000319980 AIFM3Q96NN9 605 aa8.84□□□□□ -0.99
IFT88-201ENST00000319980 RIOK1Q9BRS2 568 aaKnown RBP8.84□□□□□ -0.99
IFT88-201ENST00000319980 TNMDQ9H2S6 317 aa8.84□□□□□ -0.99
IFT88-201ENST00000319980 RCOR1Q9UKL0 485 aa8.84□□□□□ -0.99
IFT88-201ENST00000319980 COL1A1P02452 1464 aaPredicted RBP8.83□□□□□ -1
IFT88-201ENST00000319980 CCDC69A6NI79 296 aa8.83□□□□□ -1
IFT88-201ENST00000319980 LIFRP42702 1097 aa8.83□□□□□ -1
IFT88-201ENST00000319980 PPARAQ07869 468 aa8.83□□□□□ -1
IFT88-201ENST00000319980 MAP3K11Q16584 847 aa8.83□□□□□ -1
IFT88-201ENST00000319980 CPLX2Q6PUV4 134 aaKnown RBP8.83□□□□□ -1
IFT88-201ENST00000319980 SLC51AQ86UW1 340 aa8.83□□□□□ -1
IFT88-201ENST00000319980 SGMS1Q86VZ5 419 aa8.83□□□□□ -1
IFT88-201ENST00000319980 ZNF384Q8TF68 577 aa8.83□□□□□ -1
IFT88-201ENST00000319980 STAG1Q8WVM7 1258 aa8.83□□□□□ -1
IFT88-201ENST00000319980 FUCA2Q9BTY2 467 aa8.83□□□□□ -1
IFT88-201ENST00000319980 ANKIB1Q9P2G1 1089 aa8.83□□□□□ -1
IFT88-201ENST00000319980 BCORQ6W2J9 1755 aa8.83□□□□□ -1
IFT88-201ENST00000319980 ZNF831Q5JPB2 1677 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms