RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 LEO1Q8WVC0 666 aaPredicted RBP12.03□□□□□ -0.48
APOBEC3F-201ENST00000308521 SPATA32Q96LK8 384 aa12.03□□□□□ -0.48
APOBEC3F-201ENST00000308521 MINPP1Q9UNW1 487 aa12.03□□□□□ -0.48
APOBEC3F-201ENST00000308521 ZNF831Q5JPB2 1677 aa12.02□□□□□ -0.48
APOBEC3F-201ENST00000308521 GOLGA6L4A6NEF3 574 aa12.02□□□□□ -0.49
APOBEC3F-201ENST00000308521 SLC5A1P13866 664 aa12.02□□□□□ -0.49
APOBEC3F-201ENST00000308521 GYG1P46976 350 aa12.02□□□□□ -0.49
APOBEC3F-201ENST00000308521 SLC27A3Q5K4L6 730 aa12.02□□□□□ -0.49
APOBEC3F-201ENST00000308521 SLC10A5Q5PT55 438 aa12.02□□□□□ -0.49
APOBEC3F-201ENST00000308521 PIH1D3Q9NQM4 214 aaKnown RBP12.02□□□□□ -0.49
APOBEC3F-201ENST00000308521 SPEF2Q9C093 1822 aa12.02□□□□□ -0.49
APOBEC3F-201ENST00000308521 RPS6KB1P23443 525 aa12.02□□□□□ -0.49
APOBEC3F-201ENST00000308521 RPS8P62241 208 aaKnown RBP12.02□□□□□ -0.49
APOBEC3F-201ENST00000308521 CAMK4Q16566 473 aa12.02□□□□□ -0.49
APOBEC3F-201ENST00000308521 BLOC1S2Q6QNY1 142 aa12.02□□□□□ -0.49
APOBEC3F-201ENST00000308521 CNBD1Q8NA66 436 aa12.02□□□□□ -0.49
APOBEC3F-201ENST00000308521 PUS7LQ9H0K6 701 aaKnown RBP12.02□□□□□ -0.49
APOBEC3F-201ENST00000308521 HMG20BQ9P0W2 317 aa12.02□□□□□ -0.49
APOBEC3F-201ENST00000308521 BCCIPQ9P287 314 aaKnown RBP eCLIP12.02□□□□□ -0.49
APOBEC3F-201ENST00000308521 MAST3O60307 1309 aa12.01□□□□□ -0.49
APOBEC3F-201ENST00000308521 CLGNO14967 610 aa12.01□□□□□ -0.49
APOBEC3F-201ENST00000308521 U2AF2P26368 475 aaKnown RBP eCLIP12.01□□□□□ -0.49
APOBEC3F-201ENST00000308521 KLRK1P26718 216 aa12.01□□□□□ -0.49
APOBEC3F-201ENST00000308521 RASGRF1Q13972 1273 aa12.01□□□□□ -0.49
APOBEC3F-201ENST00000308521 ZMYM1Q5SVZ6 1142 aa12.01□□□□□ -0.49
APOBEC3F-201ENST00000308521 DRC7Q8IY82 874 aa12.01□□□□□ -0.49
APOBEC3F-201ENST00000308521 SECISBP2LQ93073 1101 aaKnown RBP12.01□□□□□ -0.49
APOBEC3F-201ENST00000308521 TRIM5Q9C035 493 aa12.01□□□□□ -0.49
APOBEC3F-201ENST00000308521 NEMFO60524 1076 aa12.01□□□□□ -0.49
APOBEC3F-201ENST00000308521 TNNT1P13805 278 aa12.01□□□□□ -0.49
APOBEC3F-201ENST00000308521 TM4SF1P30408 202 aa12.01□□□□□ -0.49
APOBEC3F-201ENST00000308521 SLC9C2Q5TAH2 1124 aa12.01□□□□□ -0.49
APOBEC3F-201ENST00000308521 PRR5LQ6MZQ0 368 aa12.01□□□□□ -0.49
APOBEC3F-201ENST00000308521 SARM1Q6SZW1 724 aa12.01□□□□□ -0.49
APOBEC3F-201ENST00000308521 FERMT3Q86UX7 667 aa12.01□□□□□ -0.49
APOBEC3F-201ENST00000308521 CKAP2LQ8IYA6 745 aa12.01□□□□□ -0.49
APOBEC3F-201ENST00000308521 BSDC1Q9NW68 430 aaPredicted RBP12.01□□□□□ -0.49
APOBEC3F-201ENST00000308521 MORC2Q9Y6X9 1032 aaPredicted RBP12.01□□□□□ -0.49
APOBEC3F-201ENST00000308521 TTLL5Q6EMB2 1281 aa12□□□□□ -0.49
APOBEC3F-201ENST00000308521 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12□□□□□ -0.49
APOBEC3F-201ENST00000308521 WWC3Q9ULE0 1092 aa12□□□□□ -0.49
APOBEC3F-201ENST00000308521 SPDYE4A6NLX3 237 aa12□□□□□ -0.49
APOBEC3F-201ENST00000308521 SERPINB2P05120 415 aa12□□□□□ -0.49
APOBEC3F-201ENST00000308521 HSPD1P10809 573 aaKnown RBP12□□□□□ -0.49
APOBEC3F-201ENST00000308521 LRMPQ12912 555 aa12□□□□□ -0.49
APOBEC3F-201ENST00000308521 TOB2Q14106 344 aaPredicted RBP12□□□□□ -0.49
APOBEC3F-201ENST00000308521 SPATA5Q8NB90 893 aa12□□□□□ -0.49
APOBEC3F-201ENST00000308521 NRBP1Q9UHY1 535 aa12□□□□□ -0.49
APOBEC3F-201ENST00000308521 CTNNA3Q9UI47 895 aa12□□□□□ -0.49
APOBEC3F-201ENST00000308521 CYP21A2P08686 494 aa11.99□□□□□ -0.49
APOBEC3F-201ENST00000308521 ZNF165P49910 485 aa11.99□□□□□ -0.49
APOBEC3F-201ENST00000308521 TERF2Q15554 542 aa11.99□□□□□ -0.49
APOBEC3F-201ENST00000308521 FAM173BQ6P4H8 233 aa11.99□□□□□ -0.49
APOBEC3F-201ENST00000308521 HELLSQ9NRZ9 838 aa11.99□□□□□ -0.49
APOBEC3F-201ENST00000308521 DDX41Q9UJV9 622 aaKnown RBP11.99□□□□□ -0.49
APOBEC3F-201ENST00000308521 JAG2Q9Y219 1238 aa11.99□□□□□ -0.49
APOBEC3F-201ENST00000308521 SRCAPQ6ZRS2 3230 aa11.99□□□□□ -0.49
APOBEC3F-201ENST00000308521 ARID4AP29374 1257 aaPredicted RBP11.99□□□□□ -0.49
APOBEC3F-201ENST00000308521 DDR1Q08345 913 aa11.99□□□□□ -0.49
APOBEC3F-201ENST00000308521 MSL1Q68DK7 614 aa11.99□□□□□ -0.49
APOBEC3F-201ENST00000308521 CTR9Q6PD62 1173 aa11.99□□□□□ -0.49
APOBEC3F-201ENST00000308521 COL23A1Q86Y22 540 aaPredicted RBP11.99□□□□□ -0.49
APOBEC3F-201ENST00000308521 CCDC112Q8NEF3 446 aa11.99□□□□□ -0.49
APOBEC3F-201ENST00000308521 PGBD1Q96JS3 809 aa11.99□□□□□ -0.49
APOBEC3F-201ENST00000308521 CLIP2Q9UDT6 1046 aa11.99□□□□□ -0.49
APOBEC3F-201ENST00000308521 SCN7AQ01118 1682 aa11.99□□□□□ -0.49
APOBEC3F-201ENST00000308521 CARMIL3Q8ND23 1372 aa11.99□□□□□ -0.49
APOBEC3F-201ENST00000308521 RTL9Q8NET4 1388 aa11.99□□□□□ -0.49
APOBEC3F-201ENST00000308521 HAND2P61296 217 aa11.98□□□□□ -0.49
APOBEC3F-201ENST00000308521 RESTQ13127 1097 aa11.98□□□□□ -0.49
APOBEC3F-201ENST00000308521 KRT32Q14532 448 aa11.98□□□□□ -0.49
APOBEC3F-201ENST00000308521 CACTINQ8WUQ7 758 aaKnown RBP11.98□□□□□ -0.49
APOBEC3F-201ENST00000308521 MRFAP1L1Q96HT8 127 aa11.98□□□□□ -0.49
APOBEC3F-201ENST00000308521 C16orf45Q96MC5 204 aaPredicted RBP11.98□□□□□ -0.49
APOBEC3F-201ENST00000308521 GPR101Q96P66 508 aaPredicted RBP11.98□□□□□ -0.49
APOBEC3F-201ENST00000308521 LRRC2Q9BYS8 371 aa11.98□□□□□ -0.49
APOBEC3F-201ENST00000308521 ZSCAN16Q9H4T2 348 aaPredicted RBP11.98□□□□□ -0.49
APOBEC3F-201ENST00000308521 TFIP11Q9UBB9 837 aaKnown RBP11.98□□□□□ -0.49
APOBEC3F-201ENST00000308521 C4AP0C0L4 1744 aa11.98□□□□□ -0.49
APOBEC3F-201ENST00000308521 MYO5AQ9Y4I1 1855 aaKnown RBP11.98□□□□□ -0.49
APOBEC3F-201ENST00000308521 CTAGE5O15320 804 aa11.98□□□□□ -0.49
APOBEC3F-201ENST00000308521 NR1I2O75469 434 aa11.98□□□□□ -0.49
APOBEC3F-201ENST00000308521 TXNRD3Q86VQ6 643 aa11.98□□□□□ -0.49
APOBEC3F-201ENST00000308521 VPS37DQ86XT2 251 aa11.98□□□□□ -0.49
APOBEC3F-201ENST00000308521 ABCF2Q9UG63 623 aa11.98□□□□□ -0.49
APOBEC3F-201ENST00000308521 AKAP11Q9UKA4 1901 aa11.98□□□□□ -0.49
APOBEC3F-201ENST00000308521 ZNF532Q9HCE3 1301 aa11.98□□□□□ -0.49
APOBEC3F-201ENST00000308521 UQCRFS1P1P0C7P4 283 aa11.97□□□□□ -0.49
APOBEC3F-201ENST00000308521 IQCB1Q15051 598 aa11.97□□□□□ -0.49
APOBEC3F-201ENST00000308521 TPD52L1Q16890 204 aaPredicted RBP11.97□□□□□ -0.49
APOBEC3F-201ENST00000308521 KCND1Q9NSA2 647 aa11.97□□□□□ -0.49
APOBEC3F-201ENST00000308521 CFAP45Q9UL16 551 aa11.97□□□□□ -0.49
APOBEC3F-201ENST00000308521 PLSCR1O15162 318 aa11.97□□□□□ -0.49
APOBEC3F-201ENST00000308521 EN1Q05925 392 aaPredicted RBP11.97□□□□□ -0.49
APOBEC3F-201ENST00000308521 CHST3Q7LGC8 479 aa11.97□□□□□ -0.49
APOBEC3F-201ENST00000308521 MAGEB6Q8N7X4 407 aa11.97□□□□□ -0.49
APOBEC3F-201ENST00000308521 BICD2Q8TD16 824 aa11.97□□□□□ -0.49
APOBEC3F-201ENST00000308521 GTF3C6Q969F1 213 aa11.97□□□□□ -0.49
APOBEC3F-201ENST00000308521 DNAJC25Q9H1X3 360 aa11.97□□□□□ -0.49
APOBEC3F-201ENST00000308521 RGL2O15211 777 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms