RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 A2ML1A8K2U0 1454 aa12.17□□□□□ -0.46
SYNPO2-201ENST00000307142 SPATA31A3Q5VYP0 1347 aa12.17□□□□□ -0.46
SYNPO2-201ENST00000307142 HSPA1LP34931 641 aa12.17□□□□□ -0.46
SYNPO2-201ENST00000307142 IL6STP40189 918 aaPredicted RBP12.17□□□□□ -0.46
SYNPO2-201ENST00000307142 DHX32Q7L7V1 743 aaKnown RBP12.17□□□□□ -0.46
SYNPO2-201ENST00000307142 DHX37Q8IY37 1157 aaKnown RBP12.17□□□□□ -0.46
SYNPO2-201ENST00000307142 ZNF804BA4D1E1 1349 aa12.17□□□□□ -0.46
SYNPO2-201ENST00000307142 RAD17O75943 681 aa12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 ZBTB1Q9Y2K1 713 aa12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 CCDC93Q567U6 631 aa12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 TNPO1Q92973 898 aaKnown RBP12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 AZI2Q9H6S1 392 aa12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 MRVI1Q9Y6F6 885 aa12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 COMMD10Q9Y6G5 202 aa12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 XDHP47989 1333 aa12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 YEATS4O95619 227 aa12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 MKRN3Q13064 507 aaKnown RBP12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 EP400NLQ6ZTU2 488 aa12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 ARMC9Q7Z3E5 817 aa12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 CDC42BPBQ9Y5S2 1711 aa12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 CLIP2Q9UDT6 1046 aa12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 SRP68Q9UHB9 627 aaKnown RBP12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 MMP10P09238 476 aa12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 RLBP1P12271 317 aa12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 HSP90AA2PQ14568 343 aaPredicted RBP12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 NCAPG2Q86XI2 1143 aa12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 GJD4Q96KN9 370 aaPredicted RBP12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 FERMT1Q9BQL6 677 aa12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 KDRP35968 1356 aa12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 NOP2P46087 812 aaKnown RBP12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 PALLDQ8WX93 1383 aa12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 TMX3Q96JJ7 454 aa12.16□□□□□ -0.46
SYNPO2-201ENST00000307142 LPXNO60711 386 aa12.15□□□□□ -0.46
SYNPO2-201ENST00000307142 CFBP00751 764 aa12.15□□□□□ -0.46
SYNPO2-201ENST00000307142 RUFY3Q7L099 469 aa12.15□□□□□ -0.46
SYNPO2-201ENST00000307142 DHX58Q96C10 678 aa12.15□□□□□ -0.46
SYNPO2-201ENST00000307142 NAP1L4Q99733 375 aaKnown RBP12.15□□□□□ -0.46
SYNPO2-201ENST00000307142 KIF4AO95239 1232 aa12.15□□□□□ -0.46
SYNPO2-201ENST00000307142 STX1AQ16623 288 aa12.15□□□□□ -0.46
SYNPO2-201ENST00000307142 ZNF771Q7L3S4 317 aaPredicted RBP12.15□□□□□ -0.46
SYNPO2-201ENST00000307142 KCNG4Q8TDN1 519 aa12.15□□□□□ -0.46
SYNPO2-201ENST00000307142 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.15□□□□□ -0.46
SYNPO2-201ENST00000307142 PODXL2Q9NZ53 605 aa12.15□□□□□ -0.46
SYNPO2-201ENST00000307142 PIM2Q9P1W9 311 aa12.15□□□□□ -0.46
SYNPO2-201ENST00000307142 RTL1A6NKG5 1358 aa12.15□□□□□ -0.46
SYNPO2-201ENST00000307142 CCDC169A6NNP5 214 aa12.15□□□□□ -0.46
SYNPO2-201ENST00000307142 USO1O60763 962 aaKnown RBP12.15□□□□□ -0.46
SYNPO2-201ENST00000307142 LMAN1P49257 510 aa12.15□□□□□ -0.46
SYNPO2-201ENST00000307142 CERKLQ49MI3 558 aaPredicted RBP12.15□□□□□ -0.46
SYNPO2-201ENST00000307142 TTLL6Q8N841 843 aa12.15□□□□□ -0.46
SYNPO2-201ENST00000307142 MCM4P33991 863 aa12.15□□□□□ -0.46
SYNPO2-201ENST00000307142 UIMC1Q96RL1 719 aa12.15□□□□□ -0.46
SYNPO2-201ENST00000307142 CCDC172P0C7W6 258 aa12.15□□□□□ -0.47
SYNPO2-201ENST00000307142 FAM193AP78312 1265 aa12.15□□□□□ -0.47
SYNPO2-201ENST00000307142 FAM47AQ5JRC9 791 aa12.15□□□□□ -0.47
SYNPO2-201ENST00000307142 ARHGEF16Q5VV41 709 aa12.15□□□□□ -0.47
SYNPO2-201ENST00000307142 GREM2Q9H772 168 aa12.15□□□□□ -0.47
SYNPO2-201ENST00000307142 PSDA5PKW4 1024 aaPredicted RBP12.14□□□□□ -0.47
SYNPO2-201ENST00000307142 DDX19AQ9NUU7 478 aaKnown RBP12.14□□□□□ -0.47
SYNPO2-201ENST00000307142 MYOM2P54296 1465 aa12.14□□□□□ -0.47
SYNPO2-201ENST00000307142 ZBTB40Q9NUA8 1239 aa12.14□□□□□ -0.47
SYNPO2-201ENST00000307142 BTDP43251 543 aa12.14□□□□□ -0.47
SYNPO2-201ENST00000307142 MAEAQ7L5Y9 396 aa12.14□□□□□ -0.47
SYNPO2-201ENST00000307142 PIGBQ92521 554 aa12.14□□□□□ -0.47
SYNPO2-201ENST00000307142 SYNMO15061 1565 aa12.14□□□□□ -0.47
SYNPO2-201ENST00000307142 TMCO5BA8MYB1 307 aa12.14□□□□□ -0.47
SYNPO2-201ENST00000307142 PCCAP05165 728 aaPredicted RBP12.14□□□□□ -0.47
SYNPO2-201ENST00000307142 IFT74Q96LB3 600 aa12.14□□□□□ -0.47
SYNPO2-201ENST00000307142 SORBS3O60504 671 aa12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 SFPQP23246 707 aaKnown RBP eCLIP12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 PRPF4BQ13523 1007 aaKnown RBP12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 CCDC112Q8NEF3 446 aa12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 MYCP01106 439 aaPredicted RBP12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 ZSCAN22P10073 491 aaPredicted RBP12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 IBTKQ9P2D0 1353 aaPredicted RBP12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 ZBTB7BO15156 539 aaPredicted RBP12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 C21orf2O43822 256 aa12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 NPR1P16066 1061 aa12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 CCT6AP40227 531 aaKnown RBP12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 SUPT20HL1Q3ZLR7 823 aa12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 TAF3Q5VWG9 929 aa12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 CAMSAP1Q5T5Y3 1602 aa12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 TFAP4Q01664 338 aa12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 PLEKHM2Q8IWE5 1019 aa12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 RGS22Q8NE09 1264 aa12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 ZNF174Q15697 407 aa12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 JCADQ9P266 1359 aa12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 PNMA6EA0A0J9YXQ4 647 aa12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 GSTTP1A0A1W2PQM5 241 aa12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 PER1O15534 1290 aaPredicted RBP12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 SMTNP53814 917 aa12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 RTKN2Q8IZC4 609 aa12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 FRMPD2Q68DX3 1309 aaPredicted RBP12.13□□□□□ -0.47
SYNPO2-201ENST00000307142 OSBPP22059 807 aa12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 STRN3Q13033 797 aa12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 HS2ST1Q7LGA3 356 aa12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 CHURC1Q8WUH1 139 aa12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 ARPP21Q9UBL0 812 aaPredicted RBP12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 LEMD3Q9Y2U8 911 aa12.12□□□□□ -0.47
SYNPO2-201ENST00000307142 ERBB3P21860 1342 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms