RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 GOLIM4O00461 696 aa21.59■■□□□ 1.05
CHRNB1-201ENST00000306071 HSPD1P10809 573 aaKnown RBP21.59■■□□□ 1.05
CHRNB1-201ENST00000306071 CORO7P57737 925 aa21.59■■□□□ 1.05
CHRNB1-201ENST00000306071 CASP8Q14790 479 aa21.59■■□□□ 1.05
CHRNB1-201ENST00000306071 ZNF530Q6P9A1 599 aaPredicted RBP21.59■■□□□ 1.05
CHRNB1-201ENST00000306071 SHC4Q6S5L8 630 aa21.59■■□□□ 1.05
CHRNB1-201ENST00000306071 FAM71BQ8TC56 605 aa21.59■■□□□ 1.05
CHRNB1-201ENST00000306071 HELLSQ9NRZ9 838 aa21.59■■□□□ 1.05
CHRNB1-201ENST00000306071 PIK3C2AO00443 1686 aa21.59■■□□□ 1.05
CHRNB1-201ENST00000306071 MED1Q15648 1581 aaPredicted RBP21.58■■□□□ 1.05
CHRNB1-201ENST00000306071 SLIT1O75093 1534 aa21.58■■□□□ 1.05
CHRNB1-201ENST00000306071 SOWAHDA6NJG2 315 aa21.58■■□□□ 1.05
CHRNB1-201ENST00000306071 GOLGA8BA8MQT2 603 aa21.58■■□□□ 1.05
CHRNB1-201ENST00000306071 CDC27P30260 824 aa21.58■■□□□ 1.05
CHRNB1-201ENST00000306071 KIF4BQ2VIQ3 1234 aa21.58■■□□□ 1.05
CHRNB1-201ENST00000306071 MSL3Q8N5Y2 521 aaKnown RBP21.58■■□□□ 1.05
CHRNB1-201ENST00000306071 JMYQ8N9B5 988 aa21.58■■□□□ 1.05
CHRNB1-201ENST00000306071 DEF6Q9H4E7 631 aa21.58■■□□□ 1.05
CHRNB1-201ENST00000306071 PLEKHA4Q9H4M7 779 aa21.58■■□□□ 1.05
CHRNB1-201ENST00000306071 HPSEQ9Y251 543 aa21.58■■□□□ 1.05
CHRNB1-201ENST00000306071 PCDHA5Q9Y5H7 936 aa21.58■■□□□ 1.05
CHRNB1-201ENST00000306071 NEXNQ0ZGT2 675 aa21.58■■□□□ 1.04
CHRNB1-201ENST00000306071 METTL16Q86W50 562 aaKnown RBP21.58■■□□□ 1.04
CHRNB1-201ENST00000306071 KLF18A0A0U1RQI7 1052 aa21.57■■□□□ 1.04
CHRNB1-201ENST00000306071 CCDC102BQ68D86 513 aa21.57■■□□□ 1.04
CHRNB1-201ENST00000306071 COPRSQ9NQ92 184 aa21.57■■□□□ 1.04
CHRNB1-201ENST00000306071 LOC102724159A0A0B4J2E5 919 aa21.57■■□□□ 1.04
CHRNB1-201ENST00000306071 VSNL1P62760 191 aa21.57■■□□□ 1.04
CHRNB1-201ENST00000306071 PWP2Q15269 919 aaKnown RBP21.57■■□□□ 1.04
CHRNB1-201ENST00000306071 LONRF3Q496Y0 759 aa21.57■■□□□ 1.04
CHRNB1-201ENST00000306071 ZNF569Q5MCW4 686 aa21.57■■□□□ 1.04
CHRNB1-201ENST00000306071 TTLL5Q6EMB2 1281 aa21.57■■□□□ 1.04
CHRNB1-201ENST00000306071 ACBD3Q9H3P7 528 aa21.57■■□□□ 1.04
CHRNB1-201ENST00000306071 FAM204AQ9H8W3 233 aa21.57■■□□□ 1.04
CHRNB1-201ENST00000306071 NFE2L3Q9Y4A8 694 aa21.57■■□□□ 1.04
CHRNB1-201ENST00000306071 FOXP4Q8IVH2 680 aaPredicted RBP21.56■■□□□ 1.04
CHRNB1-201ENST00000306071 CLIC6Q96NY7 704 aa21.56■■□□□ 1.04
CHRNB1-201ENST00000306071 GBP3Q9H0R5 595 aa21.56■■□□□ 1.04
CHRNB1-201ENST00000306071 ATP2B1P20020 1258 aa21.56■■□□□ 1.04
CHRNB1-201ENST00000306071 RAI14Q9P0K7 980 aa21.56■■□□□ 1.04
CHRNB1-201ENST00000306071 BMP6P22004 513 aa21.55■■□□□ 1.04
CHRNB1-201ENST00000306071 TUBB4BP68371 445 aa21.55■■□□□ 1.04
CHRNB1-201ENST00000306071 AKAP4Q5JQC9 854 aa21.55■■□□□ 1.04
CHRNB1-201ENST00000306071 PAG1Q9NWQ8 432 aa21.55■■□□□ 1.04
CHRNB1-201ENST00000306071 A0A0U1RQJ8 604 aa21.55■■□□□ 1.04
CHRNB1-201ENST00000306071 CTAGE9A4FU28 777 aa21.55■■□□□ 1.04
CHRNB1-201ENST00000306071 NEURL1BA8MQ27 555 aa21.55■■□□□ 1.04
CHRNB1-201ENST00000306071 AKR1B15C9JRZ8 316 aaPredicted RBP21.55■■□□□ 1.04
CHRNB1-201ENST00000306071 PTPN12Q05209 780 aaKnown RBP21.55■■□□□ 1.04
CHRNB1-201ENST00000306071 GCKRQ14397 625 aa21.55■■□□□ 1.04
CHRNB1-201ENST00000306071 C14orf37Q86TY3 774 aa21.55■■□□□ 1.04
CHRNB1-201ENST00000306071 ABTB2Q8N961 1025 aa21.55■■□□□ 1.04
CHRNB1-201ENST00000306071 ATRIPQ8WXE1 791 aa21.55■■□□□ 1.04
CHRNB1-201ENST00000306071 MYCBPQ99417 103 aaPredicted RBP21.55■■□□□ 1.04
CHRNB1-201ENST00000306071 ANKARQ7Z5J8 1434 aa21.54■■□□□ 1.04
CHRNB1-201ENST00000306071 ANKRD24Q8TF21 1146 aa21.54■■□□□ 1.04
CHRNB1-201ENST00000306071 NCAPGQ9BPX3 1015 aa21.54■■□□□ 1.04
CHRNB1-201ENST00000306071 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.54■■□□□ 1.04
CHRNB1-201ENST00000306071 ADGRG1Q9Y653 693 aa21.54■■□□□ 1.04
CHRNB1-201ENST00000306071 PPP6R2O75170 966 aa21.54■■□□□ 1.04
CHRNB1-201ENST00000306071 SKIDA1Q1XH10 827 aa21.54■■□□□ 1.04
CHRNB1-201ENST00000306071 RESP18Q5W5W9 173 aa21.54■■□□□ 1.04
CHRNB1-201ENST00000306071 TRMT44Q8IYL2 757 aaKnown RBP21.54■■□□□ 1.04
CHRNB1-201ENST00000306071 NEUROD6Q96NK8 337 aa21.54■■□□□ 1.04
CHRNB1-201ENST00000306071 DDX21Q9NR30 783 aaKnown RBP eCLIP21.54■■□□□ 1.04
CHRNB1-201ENST00000306071 FOXN1O15353 648 aa21.53■■□□□ 1.04
CHRNB1-201ENST00000306071 TFRCP02786 760 aaKnown RBP21.53■■□□□ 1.04
CHRNB1-201ENST00000306071 TUBB2AQ13885 445 aa21.53■■□□□ 1.04
CHRNB1-201ENST00000306071 ZMYM1Q5SVZ6 1142 aa21.53■■□□□ 1.04
CHRNB1-201ENST00000306071 CPLX3Q8WVH0 158 aa21.53■■□□□ 1.04
CHRNB1-201ENST00000306071 MYD88Q99836 296 aa21.53■■□□□ 1.04
CHRNB1-201ENST00000306071 TUBB2BQ9BVA1 445 aa21.53■■□□□ 1.04
CHRNB1-201ENST00000306071 MED4Q9NPJ6 270 aa21.53■■□□□ 1.04
CHRNB1-201ENST00000306071 KCNH3Q9ULD8 1083 aa21.53■■□□□ 1.04
CHRNB1-201ENST00000306071 TSPOAP1O95153 1857 aa21.53■■□□□ 1.04
CHRNB1-201ENST00000306071 CTAGE15A4D2H0 777 aa21.53■■□□□ 1.04
CHRNB1-201ENST00000306071 CTAGE8P0CG41 777 aa21.53■■□□□ 1.04
CHRNB1-201ENST00000306071 HAND2P61296 217 aa21.53■■□□□ 1.04
CHRNB1-201ENST00000306071 FMR1Q06787 632 aaKnown RBP eCLIP21.53■■□□□ 1.04
CHRNB1-201ENST00000306071 RAD9BQ6WBX8 426 aa21.53■■□□□ 1.04
CHRNB1-201ENST00000306071 CTAGE6Q86UF2 777 aa21.53■■□□□ 1.04
CHRNB1-201ENST00000306071 CTAGE4Q8IX94 777 aa21.53■■□□□ 1.04
CHRNB1-201ENST00000306071 PRC1O43663 620 aa21.52■■□□□ 1.04
CHRNB1-201ENST00000306071 PPFIA4O75335 1185 aa21.52■■□□□ 1.04
CHRNB1-201ENST00000306071 SART3Q15020 963 aaKnown RBP21.52■■□□□ 1.04
CHRNB1-201ENST00000306071 ARHGEF25Q86VW2 580 aa21.52■■□□□ 1.04
CHRNB1-201ENST00000306071 EFCAB13Q8IY85 973 aa21.52■■□□□ 1.04
CHRNB1-201ENST00000306071 PANX2Q96RD6 677 aa21.52■■□□□ 1.04
CHRNB1-201ENST00000306071 HPS5Q9UPZ3 1129 aa21.52■■□□□ 1.04
CHRNB1-201ENST00000306071 PALLDQ8WX93 1383 aa21.52■■□□□ 1.04
CHRNB1-201ENST00000306071 LRRIQ3A6PVS8 624 aaPredicted RBP21.52■■□□□ 1.04
CHRNB1-201ENST00000306071 ZNF18P17022 549 aa21.52■■□□□ 1.04
CHRNB1-201ENST00000306071 VPS37DQ86XT2 251 aa21.52■■□□□ 1.04
CHRNB1-201ENST00000306071 MAST3O60307 1309 aa21.52■■□□□ 1.04
CHRNB1-201ENST00000306071 MYL6BP14649 208 aa21.51■■□□□ 1.03
CHRNB1-201ENST00000306071 RFX5P48382 616 aaPredicted RBP21.51■■□□□ 1.03
CHRNB1-201ENST00000306071 DNAJC21Q5F1R6 531 aaKnown RBP21.51■■□□□ 1.03
CHRNB1-201ENST00000306071 PPFIBP1Q86W92 1011 aa21.51■■□□□ 1.03
CHRNB1-201ENST00000306071 TEX2Q8IWB9 1127 aa21.51■■□□□ 1.03
CHRNB1-201ENST00000306071 GPATCH11Q8N954 259 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms