RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 DHX8Q14562 1220 aaKnown RBP15.29■□□□□ 0.04
SLC28A1-201ENST00000286749 HOMER1Q86YM7 354 aa15.29■□□□□ 0.04
SLC28A1-201ENST00000286749 SENP2Q9HC62 589 aa15.29■□□□□ 0.04
SLC28A1-201ENST00000286749 ZNF446Q9NWS9 450 aa15.29■□□□□ 0.04
SLC28A1-201ENST00000286749 TNS3Q68CZ2 1445 aa15.29■□□□□ 0.04
SLC28A1-201ENST00000286749 SERPINC1P01008 464 aa15.29■□□□□ 0.04
SLC28A1-201ENST00000286749 SLFN14P0C7P3 912 aa15.29■□□□□ 0.04
SLC28A1-201ENST00000286749 UBASH3AP57075 661 aa15.29■□□□□ 0.04
SLC28A1-201ENST00000286749 TCIRG1Q13488 830 aa15.29■□□□□ 0.04
SLC28A1-201ENST00000286749 PTPAQ15257 358 aa15.29■□□□□ 0.04
SLC28A1-201ENST00000286749 CCDC93Q567U6 631 aa15.29■□□□□ 0.04
SLC28A1-201ENST00000286749 FBXO3Q9UK99 471 aa15.29■□□□□ 0.04
SLC28A1-201ENST00000286749 RIC1Q4ADV7 1423 aa15.28■□□□□ 0.04
SLC28A1-201ENST00000286749 ABCC12Q96J65 1359 aa15.28■□□□□ 0.04
SLC28A1-201ENST00000286749 ERVV-2B6SEH9 535 aa15.28■□□□□ 0.04
SLC28A1-201ENST00000286749 SH2B2O14492 632 aaPredicted RBP15.28■□□□□ 0.04
SLC28A1-201ENST00000286749 CDC27P30260 824 aa15.28■□□□□ 0.04
SLC28A1-201ENST00000286749 MYL5Q02045 173 aa15.28■□□□□ 0.04
SLC28A1-201ENST00000286749 IFIT5Q13325 482 aaKnown RBP15.28■□□□□ 0.04
SLC28A1-201ENST00000286749 CLIC6Q96NY7 704 aa15.28■□□□□ 0.04
SLC28A1-201ENST00000286749 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.28■□□□□ 0.04
SLC28A1-201ENST00000286749 CDKL5O76039 1030 aa15.28■□□□□ 0.04
SLC28A1-201ENST00000286749 APPP05067 770 aa15.28■□□□□ 0.04
SLC28A1-201ENST00000286749 PTPN21Q16825 1174 aa15.28■□□□□ 0.04
SLC28A1-201ENST00000286749 CFAP100Q494V2 611 aa15.28■□□□□ 0.04
SLC28A1-201ENST00000286749 APOA5Q6Q788 366 aa15.28■□□□□ 0.04
SLC28A1-201ENST00000286749 MICU3Q86XE3 530 aa15.28■□□□□ 0.04
SLC28A1-201ENST00000286749 JMYQ8N9B5 988 aa15.28■□□□□ 0.04
SLC28A1-201ENST00000286749 FAM53CQ9NYF3 392 aa15.28■□□□□ 0.04
SLC28A1-201ENST00000286749 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.28■□□□□ 0.04
SLC28A1-201ENST00000286749 PPP6R2O75170 966 aa15.27■□□□□ 0.04
SLC28A1-201ENST00000286749 ADD2P35612 726 aa15.27■□□□□ 0.04
SLC28A1-201ENST00000286749 GOLGA8FQ08AF8 430 aa15.27■□□□□ 0.04
SLC28A1-201ENST00000286749 GOLGA8DPQ0D2H9 430 aa15.27■□□□□ 0.04
SLC28A1-201ENST00000286749 METTL24Q5JXM2 366 aa15.27■□□□□ 0.04
SLC28A1-201ENST00000286749 SLC9C2Q5TAH2 1124 aa15.27■□□□□ 0.04
SLC28A1-201ENST00000286749 MAP3K14Q99558 947 aa15.27■□□□□ 0.04
SLC28A1-201ENST00000286749 DNAI1Q9UI46 699 aa15.27■□□□□ 0.04
SLC28A1-201ENST00000286749 B4E1Z4 1266 aa15.27■□□□□ 0.03
SLC28A1-201ENST00000286749 H2AFXP16104 143 aaPredicted RBP15.27■□□□□ 0.03
SLC28A1-201ENST00000286749 RESP18Q5W5W9 173 aa15.27■□□□□ 0.03
SLC28A1-201ENST00000286749 METTL16Q86W50 562 aaKnown RBP15.27■□□□□ 0.03
SLC28A1-201ENST00000286749 SYNE4Q8N205 404 aa15.27■□□□□ 0.03
SLC28A1-201ENST00000286749 CBFA2T2O43439 604 aa15.26■□□□□ 0.03
SLC28A1-201ENST00000286749 PCCAP05165 728 aaPredicted RBP15.26■□□□□ 0.03
SLC28A1-201ENST00000286749 ETF1P62495 437 aaKnown RBP15.26■□□□□ 0.03
SLC28A1-201ENST00000286749 CHD4Q14839 1912 aa15.26■□□□□ 0.03
SLC28A1-201ENST00000286749 TMEM232C9JQI7 657 aa15.26■□□□□ 0.03
SLC28A1-201ENST00000286749 TERF2Q15554 542 aa15.26■□□□□ 0.03
SLC28A1-201ENST00000286749 LONRF3Q496Y0 759 aa15.26■□□□□ 0.03
SLC28A1-201ENST00000286749 CPLX2Q6PUV4 134 aaKnown RBP15.26■□□□□ 0.03
SLC28A1-201ENST00000286749 TOM1L2Q6ZVM7 507 aa15.26■□□□□ 0.03
SLC28A1-201ENST00000286749 MYL10Q9BUA6 226 aa15.26■□□□□ 0.03
SLC28A1-201ENST00000286749 PIH1D3Q9NQM4 214 aaKnown RBP15.26■□□□□ 0.03
SLC28A1-201ENST00000286749 UBE2Q2LH0YL09 131 aa15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 CCP110O43303 1012 aa15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 IDH1O75874 414 aaKnown RBP15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 TUBB4AP04350 444 aa15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 CSF1RP07333 972 aa15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 OLFM4Q6UX06 510 aa15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 AEBP2Q6ZN18 517 aaPredicted RBP15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 NFXL1Q6ZNB6 911 aa15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 VSTM4Q8IW00 320 aa15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 RGS22Q8NE09 1264 aa15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 UTP14AQ9BVJ6 771 aaKnown RBP15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 ST7Q9NRC1 585 aa15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 FANCLQ9NW38 375 aa15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 PHLPP2Q6ZVD8 1323 aa15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 FAM237AA0A1B0GTK4 181 aa15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 ZBTB43O43298 467 aa15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 RANBP6O60518 1105 aaKnown RBP15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 IARSP41252 1262 aaKnown RBP15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 TRIM29Q14134 588 aa15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 ARHGAP29Q52LW3 1261 aa15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 ATRNO75882 1429 aa15.25■□□□□ 0.03
SLC28A1-201ENST00000286749 CUTAO60888 179 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 TOP1P11387 765 aaKnown RBP15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 NTRK3Q16288 839 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 TRIM65Q6PJ69 517 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 LDHAL6AQ6ZMR3 332 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 KRBA2Q6ZNG9 492 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 FOXP4Q8IVH2 680 aaPredicted RBP15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 CNNM3Q8NE01 707 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 PLA2G12BQ9BX93 195 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 TMX1Q9H3N1 280 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 INCENPQ9NQS7 918 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 KCNH3Q9ULD8 1083 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 RIPOR2Q9Y4F9 1068 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 PCDHA5Q9Y5H7 936 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 ZNF532Q9HCE3 1301 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 TNS2Q63HR2 1409 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 GOLGA8AA7E2F4 631 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 FANCGO15287 622 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 CLCN6P51797 869 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 HSP90AA4PQ58FG1 418 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 ZBTB38Q8NAP3 1195 aaPredicted RBP15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 SPATA31A3Q5VYP0 1347 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 UBN2Q6ZU65 1347 aa15.24■□□□□ 0.03
SLC28A1-201ENST00000286749 WDR17Q8IZU2 1322 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms