RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 PDE6AP16499 860 aa29.19■■■□□ 2.26
ROM1-201ENST00000278833 ME1P48163 572 aa29.19■■■□□ 2.26
ROM1-201ENST00000278833 CEBPZQ03701 1054 aaKnown RBP29.19■■■□□ 2.26
ROM1-201ENST00000278833 SLC9C2Q5TAH2 1124 aa29.19■■■□□ 2.26
ROM1-201ENST00000278833 MYSM1Q5VVJ2 828 aa29.19■■■□□ 2.26
ROM1-201ENST00000278833 MPNDQ8N594 471 aa29.19■■■□□ 2.26
ROM1-201ENST00000278833 SPC24Q8NBT2 197 aa29.19■■■□□ 2.26
ROM1-201ENST00000278833 TRIM5Q9C035 493 aa29.19■■■□□ 2.26
ROM1-201ENST00000278833 BCORQ6W2J9 1755 aa29.18■■■□□ 2.26
ROM1-201ENST00000278833 PLSCR1O15162 318 aa29.18■■■□□ 2.26
ROM1-201ENST00000278833 PTGS1P23219 599 aa29.17■■■□□ 2.26
ROM1-201ENST00000278833 FOSBP53539 338 aa29.17■■■□□ 2.26
ROM1-201ENST00000278833 DNTTIP2Q5QJE6 756 aaKnown RBP29.17■■■□□ 2.26
ROM1-201ENST00000278833 DZIP3Q86Y13 1208 aaKnown RBP29.17■■■□□ 2.26
ROM1-201ENST00000278833 CPLX1O14810 134 aa29.17■■■□□ 2.26
ROM1-201ENST00000278833 GUCY1B3Q02153 619 aa29.17■■■□□ 2.26
ROM1-201ENST00000278833 KIF23Q02241 960 aaPredicted RBP29.17■■■□□ 2.26
ROM1-201ENST00000278833 C11orf57Q6ZUT1 292 aaPredicted RBP29.17■■■□□ 2.26
ROM1-201ENST00000278833 TBC1D10CQ8IV04 446 aa29.17■■■□□ 2.26
ROM1-201ENST00000278833 GOLGA6L19H0YKK7 550 aa29.16■■■□□ 2.26
ROM1-201ENST00000278833 SGMS1Q86VZ5 419 aa29.16■■■□□ 2.26
ROM1-201ENST00000278833 BPIFA3Q9BQP9 254 aa29.16■■■□□ 2.26
ROM1-201ENST00000278833 ZNF532Q9HCE3 1301 aa29.16■■■□□ 2.26
ROM1-201ENST00000278833 PHKA1P46020 1223 aa29.15■■■□□ 2.26
ROM1-201ENST00000278833 CAMKK2Q96RR4 588 aa29.15■■■□□ 2.26
ROM1-201ENST00000278833 EIF5P55010 431 aaKnown RBP29.14■■■□□ 2.26
ROM1-201ENST00000278833 EZH2Q15910 746 aaKnown RBP29.14■■■□□ 2.26
ROM1-201ENST00000278833 STRBPQ96SI9 672 aaKnown RBP29.14■■■□□ 2.26
ROM1-201ENST00000278833 NEMFO60524 1076 aa29.14■■■□□ 2.26
ROM1-201ENST00000278833 STK38Q15208 465 aa29.14■■■□□ 2.26
ROM1-201ENST00000278833 CCDC186Q7Z3E2 898 aa29.14■■■□□ 2.26
ROM1-201ENST00000278833 CEP57L1Q8IYX8 460 aa29.14■■■□□ 2.26
ROM1-201ENST00000278833 NEDD4P46934 1319 aa29.14■■■□□ 2.26
ROM1-201ENST00000278833 STK36Q9NRP7 1315 aa29.14■■■□□ 2.26
ROM1-201ENST00000278833 SPTLC2O15270 562 aa29.13■■■□□ 2.25
ROM1-201ENST00000278833 SLC5A1P13866 664 aa29.13■■■□□ 2.25
ROM1-201ENST00000278833 ZNF831Q5JPB2 1677 aa29.13■■■□□ 2.25
ROM1-201ENST00000278833 NAT10Q9H0A0 1025 aaKnown RBP29.13■■■□□ 2.25
ROM1-201ENST00000278833 CYB5R4Q7L1T6 521 aa29.12■■■□□ 2.25
ROM1-201ENST00000278833 DHX40Q8IX18 779 aaKnown RBP29.12■■■□□ 2.25
ROM1-201ENST00000278833 PROM2Q8N271 834 aa29.12■■■□□ 2.25
ROM1-201ENST00000278833 C17orf53Q8N3J3 647 aaPredicted RBP29.12■■■□□ 2.25
ROM1-201ENST00000278833 MTA3Q9BTC8 594 aa29.12■■■□□ 2.25
ROM1-201ENST00000278833 LIFRP42702 1097 aa29.12■■■□□ 2.25
ROM1-201ENST00000278833 CPLX2Q6PUV4 134 aaKnown RBP29.12■■■□□ 2.25
ROM1-201ENST00000278833 UBE2Q2Q8WVN8 375 aa29.12■■■□□ 2.25
ROM1-201ENST00000278833 CLIC4Q9Y696 253 aa29.12■■■□□ 2.25
ROM1-201ENST00000278833 METAP2P50579 478 aaKnown RBP eCLIP29.11■■■□□ 2.25
ROM1-201ENST00000278833 ANO1Q5XXA6 986 aa29.11■■■□□ 2.25
ROM1-201ENST00000278833 APOA5Q6Q788 366 aa29.11■■■□□ 2.25
ROM1-201ENST00000278833 CLIP2Q9UDT6 1046 aa29.11■■■□□ 2.25
ROM1-201ENST00000278833 WWC3Q9ULE0 1092 aa29.11■■■□□ 2.25
ROM1-201ENST00000278833 A0A1B0GUL6 1792 aa29.11■■■□□ 2.25
ROM1-201ENST00000278833 IDH1O75874 414 aaKnown RBP29.1■■■□□ 2.25
ROM1-201ENST00000278833 PARP10Q53GL7 1025 aa29.1■■■□□ 2.25
ROM1-201ENST00000278833 TIGD1Q96MW7 591 aa29.1■■■□□ 2.25
ROM1-201ENST00000278833 FAM237AA0A1B0GTK4 181 aa29.1■■■□□ 2.25
ROM1-201ENST00000278833 PATL2C9JE40 543 aaKnown RBP29.1■■■□□ 2.25
ROM1-201ENST00000278833 CMA1P23946 247 aa29.1■■■□□ 2.25
ROM1-201ENST00000278833 SPATA5Q8NB90 893 aa29.1■■■□□ 2.25
ROM1-201ENST00000278833 IGDCC4Q8TDY8 1250 aa29.1■■■□□ 2.25
ROM1-201ENST00000278833 SMARCC1Q92922 1105 aaPredicted RBP29.1■■■□□ 2.25
ROM1-201ENST00000278833 PNPLA7Q6ZV29 1317 aa29.09■■■□□ 2.25
ROM1-201ENST00000278833 KIF28PB7ZC32 967 aa29.09■■■□□ 2.25
ROM1-201ENST00000278833 TXNRD1Q16881 649 aa29.09■■■□□ 2.25
ROM1-201ENST00000278833 AXDND1Q5T1B0 1012 aaPredicted RBP29.09■■■□□ 2.25
ROM1-201ENST00000278833 PPP6R2O75170 966 aa29.08■■■□□ 2.25
ROM1-201ENST00000278833 MAP3K12Q12852 859 aa29.08■■■□□ 2.25
ROM1-201ENST00000278833 SF3A1Q15459 793 aaKnown RBP29.08■■■□□ 2.25
ROM1-201ENST00000278833 SYNE3Q6ZMZ3 975 aa29.08■■■□□ 2.25
ROM1-201ENST00000278833 DRC7Q8IY82 874 aa29.08■■■□□ 2.25
ROM1-201ENST00000278833 AIDAQ96BJ3 306 aa29.08■■■□□ 2.25
ROM1-201ENST00000278833 CNNM2Q9H8M5 875 aa29.08■■■□□ 2.25
ROM1-201ENST00000278833 KIAA1468Q9P260 1216 aa29.08■■■□□ 2.25
ROM1-201ENST00000278833 NDUFA8P51970 172 aa29.08■■■□□ 2.25
ROM1-201ENST00000278833 SLC39A14Q15043 492 aa29.08■■■□□ 2.25
ROM1-201ENST00000278833 OTUD7BQ6GQQ9 843 aa29.08■■■□□ 2.25
ROM1-201ENST00000278833 LY9Q9HBG7 655 aa29.08■■■□□ 2.25
ROM1-201ENST00000278833 RGPD3A6NKT7 1758 aaPredicted RBP29.07■■■□□ 2.24
ROM1-201ENST00000278833 RGPD4Q7Z3J3 1758 aa29.07■■■□□ 2.24
ROM1-201ENST00000278833 GNAT2P19087 354 aa29.07■■■□□ 2.24
ROM1-201ENST00000278833 RCAN1P53805 252 aa29.07■■■□□ 2.24
ROM1-201ENST00000278833 CHAF1AQ13111 956 aaPredicted RBP29.07■■■□□ 2.24
ROM1-201ENST00000278833 NTRK3Q16288 839 aa29.07■■■□□ 2.24
ROM1-201ENST00000278833 GLIPR1L2Q4G1C9 344 aa29.07■■■□□ 2.24
ROM1-201ENST00000278833 CCDC87Q9NVE4 849 aa29.07■■■□□ 2.24
ROM1-201ENST00000278833 COL5A3P25940 1745 aaPredicted RBP29.07■■■□□ 2.24
ROM1-201ENST00000278833 BECN2A8MW95 431 aa29.06■■■□□ 2.24
ROM1-201ENST00000278833 KCNQ4P56696 695 aa29.06■■■□□ 2.24
ROM1-201ENST00000278833 INTS5Q6P9B9 1019 aaKnown RBP29.06■■■□□ 2.24
ROM1-201ENST00000278833 ALG1Q9BT22 464 aa29.06■■■□□ 2.24
ROM1-201ENST00000278833 EPB41L4AQ9HCS5 686 aaPredicted RBP29.06■■■□□ 2.24
ROM1-201ENST00000278833 UTP14AQ9BVJ6 771 aaKnown RBP29.06■■■□□ 2.24
ROM1-201ENST00000278833 LY75O60449 1722 aa29.06■■■□□ 2.24
ROM1-201ENST00000278833 A0A1B0GVL5 298 aa29.05■■■□□ 2.24
ROM1-201ENST00000278833 ZBTB43O43298 467 aa29.05■■■□□ 2.24
ROM1-201ENST00000278833 RASGRF1Q13972 1273 aa29.05■■■□□ 2.24
ROM1-201ENST00000278833 IFNL3Q8IZI9 196 aa29.05■■■□□ 2.24
ROM1-201ENST00000278833 LRRC4BQ9NT99 713 aa29.05■■■□□ 2.24
ROM1-201ENST00000278833 NRBP1Q9UHY1 535 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms