RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 ANO1Q5XXA6 986 aa19.72■□□□□ 0.75
LRRC56-201ENST00000270115 CDC27P30260 824 aa19.72■□□□□ 0.75
LRRC56-201ENST00000270115 MKRN1Q9UHC7 482 aaKnown RBP19.72■□□□□ 0.75
LRRC56-201ENST00000270115 LRRC37A3O60309 1634 aa19.71■□□□□ 0.75
LRRC56-201ENST00000270115 E7EWF7 191 aa19.71■□□□□ 0.75
LRRC56-201ENST00000270115 TBX2Q13207 712 aaPredicted RBP19.71■□□□□ 0.75
LRRC56-201ENST00000270115 KSR2Q6VAB6 950 aa19.71■□□□□ 0.75
LRRC56-201ENST00000270115 TUBE1Q9UJT0 475 aa19.71■□□□□ 0.75
LRRC56-201ENST00000270115 PRAMEF22A3QJZ6 481 aa19.71■□□□□ 0.75
LRRC56-201ENST00000270115 KIF4BQ2VIQ3 1234 aa19.71■□□□□ 0.75
LRRC56-201ENST00000270115 TTLL5Q6EMB2 1281 aa19.71■□□□□ 0.75
LRRC56-201ENST00000270115 MICALL1Q8N3F8 863 aa19.71■□□□□ 0.75
LRRC56-201ENST00000270115 DBF4Q9UBU7 674 aaPredicted RBP19.71■□□□□ 0.75
LRRC56-201ENST00000270115 ZNF569Q5MCW4 686 aa19.7■□□□□ 0.74
LRRC56-201ENST00000270115 SPECC1LQ69YQ0 1117 aa19.7■□□□□ 0.74
LRRC56-201ENST00000270115 CHRM1P11229 460 aaPredicted RBP19.7■□□□□ 0.74
LRRC56-201ENST00000270115 CPLX3Q8WVH0 158 aa19.7■□□□□ 0.74
LRRC56-201ENST00000270115 CDC23Q9UJX2 597 aa19.7■□□□□ 0.74
LRRC56-201ENST00000270115 LRRIQ3A6PVS8 624 aaPredicted RBP19.69■□□□□ 0.74
LRRC56-201ENST00000270115 BTBD11A6QL63 1104 aa19.69■□□□□ 0.74
LRRC56-201ENST00000270115 CCDC175P0C221 793 aa19.69■□□□□ 0.74
LRRC56-201ENST00000270115 USP5P45974 858 aa19.69■□□□□ 0.74
LRRC56-201ENST00000270115 FOXP4Q8IVH2 680 aaPredicted RBP19.69■□□□□ 0.74
LRRC56-201ENST00000270115 TRMT44Q8IYL2 757 aaKnown RBP19.69■□□□□ 0.74
LRRC56-201ENST00000270115 CEP112Q8N8E3 955 aa19.69■□□□□ 0.74
LRRC56-201ENST00000270115 CLIC6Q96NY7 704 aa19.69■□□□□ 0.74
LRRC56-201ENST00000270115 RAB21Q9UL25 225 aa19.69■□□□□ 0.74
LRRC56-201ENST00000270115 ATP5JP18859 108 aa19.69■□□□□ 0.74
LRRC56-201ENST00000270115 TFCP2Q12800 502 aa19.69■□□□□ 0.74
LRRC56-201ENST00000270115 FOXN1O15353 648 aa19.68■□□□□ 0.74
LRRC56-201ENST00000270115 HSPA2P54652 639 aa19.68■□□□□ 0.74
LRRC56-201ENST00000270115 FAM71BQ8TC56 605 aa19.68■□□□□ 0.74
LRRC56-201ENST00000270115 DBNDD2Q9BQY9 259 aa19.68■□□□□ 0.74
LRRC56-201ENST00000270115 C19orf44Q9H6X5 657 aa19.68■□□□□ 0.74
LRRC56-201ENST00000270115 HDAC5Q9UQL6 1122 aa19.68■□□□□ 0.74
LRRC56-201ENST00000270115 PCDHA5Q9Y5H7 936 aa19.68■□□□□ 0.74
LRRC56-201ENST00000270115 HOXC9P31274 260 aa19.68■□□□□ 0.74
LRRC56-201ENST00000270115 MSANTD4Q8NCY6 345 aa19.68■□□□□ 0.74
LRRC56-201ENST00000270115 ZNF274Q96GC6 653 aaPredicted RBP19.68■□□□□ 0.74
LRRC56-201ENST00000270115 KIF5CO60282 957 aa19.67■□□□□ 0.74
LRRC56-201ENST00000270115 BMP6P22004 513 aa19.67■□□□□ 0.74
LRRC56-201ENST00000270115 EPHA10Q5JZY3 1008 aa19.67■□□□□ 0.74
LRRC56-201ENST00000270115 SHC4Q6S5L8 630 aa19.67■□□□□ 0.74
LRRC56-201ENST00000270115 RNF216Q9NWF9 866 aaPredicted RBP19.67■□□□□ 0.74
LRRC56-201ENST00000270115 LONRF3Q496Y0 759 aa19.67■□□□□ 0.74
LRRC56-201ENST00000270115 METTL16Q86W50 562 aaKnown RBP19.67■□□□□ 0.74
LRRC56-201ENST00000270115 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.67■□□□□ 0.74
LRRC56-201ENST00000270115 AGXT2Q9BYV1 514 aa19.67■□□□□ 0.74
LRRC56-201ENST00000270115 NFE2L3Q9Y4A8 694 aa19.67■□□□□ 0.74
LRRC56-201ENST00000270115 POTEB2H3BUK9 544 aa19.66■□□□□ 0.74
LRRC56-201ENST00000270115 FMN2Q9NZ56 1722 aa19.66■□□□□ 0.74
LRRC56-201ENST00000270115 RNF40O75150 1001 aa19.66■□□□□ 0.74
LRRC56-201ENST00000270115 ZNF827Q17R98 1081 aa19.66■□□□□ 0.74
LRRC56-201ENST00000270115 TNNI3KQ59H18 835 aa19.66■□□□□ 0.74
LRRC56-201ENST00000270115 SPECC1Q5M775 1068 aa19.66■□□□□ 0.74
LRRC56-201ENST00000270115 RAD9BQ6WBX8 426 aa19.66■□□□□ 0.74
LRRC56-201ENST00000270115 MPRIPQ6WCQ1 1025 aa19.66■□□□□ 0.74
LRRC56-201ENST00000270115 FPGT-TNNI3KV9GXZ4 949 aa19.66■□□□□ 0.74
LRRC56-201ENST00000270115 SETD1BQ9UPS6 1966 aaKnown RBP19.66■□□□□ 0.74
LRRC56-201ENST00000270115 PPFIA4O75335 1185 aa19.66■□□□□ 0.74
LRRC56-201ENST00000270115 PRR29P0C7W0 189 aa19.66■□□□□ 0.74
LRRC56-201ENST00000270115 FMR1Q06787 632 aaKnown RBP eCLIP19.66■□□□□ 0.74
LRRC56-201ENST00000270115 TADA2BQ86TJ2 420 aa19.66■□□□□ 0.74
LRRC56-201ENST00000270115 LINS1Q8NG48 757 aa19.66■□□□□ 0.74
LRRC56-201ENST00000270115 SLC39A14Q15043 492 aa19.65■□□□□ 0.74
LRRC56-201ENST00000270115 DNAJC21Q5F1R6 531 aaKnown RBP19.65■□□□□ 0.74
LRRC56-201ENST00000270115 ESCO1Q5FWF5 840 aa19.65■□□□□ 0.74
LRRC56-201ENST00000270115 EFCAB13Q8IY85 973 aa19.65■□□□□ 0.74
LRRC56-201ENST00000270115 AIFM3Q96NN9 605 aa19.65■□□□□ 0.74
LRRC56-201ENST00000270115 CDC5LQ99459 802 aaKnown RBP19.65■□□□□ 0.74
LRRC56-201ENST00000270115 PHF8Q9UPP1 1060 aa19.65■□□□□ 0.74
LRRC56-201ENST00000270115 GOLIM4O00461 696 aa19.65■□□□□ 0.74
LRRC56-201ENST00000270115 ABL1P00519 1130 aa19.65■□□□□ 0.74
LRRC56-201ENST00000270115 HOXB7P09629 217 aa19.65■□□□□ 0.74
LRRC56-201ENST00000270115 MMS22LQ6ZRQ5 1243 aa19.65■□□□□ 0.74
LRRC56-201ENST00000270115 BRAPQ7Z569 592 aa19.65■□□□□ 0.74
LRRC56-201ENST00000270115 SLC35F6Q8N357 371 aa19.65■□□□□ 0.74
LRRC56-201ENST00000270115 NOA1Q8NC60 698 aaKnown RBP19.65■□□□□ 0.74
LRRC56-201ENST00000270115 ADGRG1Q9Y653 693 aa19.65■□□□□ 0.74
LRRC56-201ENST00000270115 NCAPD2Q15021 1401 aa19.64■□□□□ 0.73
LRRC56-201ENST00000270115 CPLX1O14810 134 aa19.64■□□□□ 0.73
LRRC56-201ENST00000270115 LIG3P49916 1009 aa19.64■□□□□ 0.73
LRRC56-201ENST00000270115 HAND2P61296 217 aa19.64■□□□□ 0.73
LRRC56-201ENST00000270115 KIF23Q02241 960 aaPredicted RBP19.64■□□□□ 0.73
LRRC56-201ENST00000270115 RIN2Q8WYP3 895 aaPredicted RBP19.64■□□□□ 0.73
LRRC56-201ENST00000270115 GDAP1L1Q96MZ0 367 aa19.64■□□□□ 0.73
LRRC56-201ENST00000270115 RABEP2Q9H5N1 569 aa19.64■□□□□ 0.73
LRRC56-201ENST00000270115 SAMSN1Q9NSI8 373 aaKnown RBP19.64■□□□□ 0.73
LRRC56-201ENST00000270115 BRD2P25440 801 aaKnown RBP19.64■□□□□ 0.73
LRRC56-201ENST00000270115 AFAP1L1Q8TED9 768 aa19.64■□□□□ 0.73
LRRC56-201ENST00000270115 TEX13AQ9BXU3 409 aaPredicted RBP19.64■□□□□ 0.73
LRRC56-201ENST00000270115 RAI14Q9P0K7 980 aa19.64■□□□□ 0.73
LRRC56-201ENST00000270115 KLF18A0A0U1RQI7 1052 aa19.63■□□□□ 0.73
LRRC56-201ENST00000270115 CTAGE15A4D2H0 777 aa19.63■□□□□ 0.73
LRRC56-201ENST00000270115 CTAGE9A4FU28 777 aa19.63■□□□□ 0.73
LRRC56-201ENST00000270115 GOLGA8BA8MQT2 603 aa19.63■□□□□ 0.73
LRRC56-201ENST00000270115 CTAGE8P0CG41 777 aa19.63■□□□□ 0.73
LRRC56-201ENST00000270115 MCTP2Q6DN12 878 aa19.63■□□□□ 0.73
LRRC56-201ENST00000270115 CTAGE6Q86UF2 777 aa19.63■□□□□ 0.73
LRRC56-201ENST00000270115 CTAGE4Q8IX94 777 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms