RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 NASPP49321 788 aaPredicted RBP20.84■□□□□ 0.93
SSB-201ENST00000260956 STK3Q13188 491 aa20.84■□□□□ 0.93
SSB-201ENST00000260956 CDC5LQ99459 802 aaKnown RBP20.84■□□□□ 0.93
SSB-201ENST00000260956 RNF181Q9P0P0 153 aa20.84■□□□□ 0.93
SSB-201ENST00000260956 SBF1O95248 1867 aa20.84■□□□□ 0.93
SSB-201ENST00000260956 LMNB1P20700 586 aa20.84■□□□□ 0.93
SSB-201ENST00000260956 TTF1Q15361 905 aaPredicted RBP20.84■□□□□ 0.93
SSB-201ENST00000260956 CC2D2BQ6DHV5 1058 aa20.84■□□□□ 0.93
SSB-201ENST00000260956 PSMD1Q99460 953 aa20.84■□□□□ 0.93
SSB-201ENST00000260956 BSDC1Q9NW68 430 aaPredicted RBP20.84■□□□□ 0.93
SSB-201ENST00000260956 CTNNA3Q9UI47 895 aa20.84■□□□□ 0.93
SSB-201ENST00000260956 DUOX1Q9NRD9 1551 aa20.83■□□□□ 0.93
SSB-201ENST00000260956 COL4A5P29400 1685 aa20.83■□□□□ 0.93
SSB-201ENST00000260956 ELP1O95163 1332 aa20.83■□□□□ 0.93
SSB-201ENST00000260956 LRRC37AA6NMS7 1700 aa20.83■□□□□ 0.93
SSB-201ENST00000260956 RESTQ13127 1097 aa20.83■□□□□ 0.92
SSB-201ENST00000260956 HELBQ8NG08 1087 aaPredicted RBP20.83■□□□□ 0.92
SSB-201ENST00000260956 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.83■□□□□ 0.92
SSB-201ENST00000260956 POLLQ9UGP5 575 aa20.83■□□□□ 0.92
SSB-201ENST00000260956 MINPP1Q9UNW1 487 aa20.83■□□□□ 0.92
SSB-201ENST00000260956 WDR19Q8NEZ3 1342 aa20.83■□□□□ 0.92
SSB-201ENST00000260956 FIBPO43427 364 aa20.82■□□□□ 0.92
SSB-201ENST00000260956 PDE6AP16499 860 aa20.82■□□□□ 0.92
SSB-201ENST00000260956 ANTXR2P58335 489 aa20.82■□□□□ 0.92
SSB-201ENST00000260956 APOBRQ0VD83 1088 aa20.82■□□□□ 0.92
SSB-201ENST00000260956 RASGRF1Q13972 1273 aa20.82■□□□□ 0.92
SSB-201ENST00000260956 WASHC4Q2M389 1173 aa20.82■□□□□ 0.92
SSB-201ENST00000260956 TMC4Q7Z404 712 aa20.82■□□□□ 0.92
SSB-201ENST00000260956 MPNDQ8N594 471 aa20.82■□□□□ 0.92
SSB-201ENST00000260956 GPR101Q96P66 508 aaPredicted RBP20.82■□□□□ 0.92
SSB-201ENST00000260956 RTFDC1Q9BY42 306 aaPredicted RBP20.82■□□□□ 0.92
SSB-201ENST00000260956 CHD4Q14839 1912 aa20.82■□□□□ 0.92
SSB-201ENST00000260956 ZMYM6O95789 1325 aa20.82■□□□□ 0.92
SSB-201ENST00000260956 YY1P25490 414 aa20.81■□□□□ 0.92
SSB-201ENST00000260956 ZSCAN25Q6NSZ9 544 aa20.81■□□□□ 0.92
SSB-201ENST00000260956 DPP8Q6V1X1 898 aaPredicted RBP20.81■□□□□ 0.92
SSB-201ENST00000260956 TTC6Q86TZ1 520 aa20.81■□□□□ 0.92
SSB-201ENST00000260956 ZNF274Q96GC6 653 aaPredicted RBP20.81■□□□□ 0.92
SSB-201ENST00000260956 SNAP23O00161 211 aa20.81■□□□□ 0.92
SSB-201ENST00000260956 SLC5A1P13866 664 aa20.81■□□□□ 0.92
SSB-201ENST00000260956 SYAP1Q96A49 352 aaPredicted RBP20.81■□□□□ 0.92
SSB-201ENST00000260956 PDLIM2Q96JY6 352 aa20.81■□□□□ 0.92
SSB-201ENST00000260956 RRAGDQ9NQL2 400 aaPredicted RBP20.81■□□□□ 0.92
SSB-201ENST00000260956 PDIA3P30101 505 aaKnown RBP20.8■□□□□ 0.92
SSB-201ENST00000260956 SLC9C2Q5TAH2 1124 aa20.8■□□□□ 0.92
SSB-201ENST00000260956 LTBP1Q14766 1721 aa20.8■□□□□ 0.92
SSB-201ENST00000260956 ZNF804BA4D1E1 1349 aa20.8■□□□□ 0.92
SSB-201ENST00000260956 ZNF532Q9HCE3 1301 aa20.8■□□□□ 0.92
SSB-201ENST00000260956 COL1A1P02452 1464 aaPredicted RBP20.8■□□□□ 0.92
SSB-201ENST00000260956 IGHMBP2P38935 993 aaKnown RBP20.79■□□□□ 0.92
SSB-201ENST00000260956 CCDC173Q0VFZ6 552 aa20.79■□□□□ 0.92
SSB-201ENST00000260956 IMMTQ16891 758 aaKnown RBP20.79■□□□□ 0.92
SSB-201ENST00000260956 CCDC183Q5T5S1 534 aa20.79■□□□□ 0.92
SSB-201ENST00000260956 SPATA5Q8NB90 893 aa20.79■□□□□ 0.92
SSB-201ENST00000260956 GPHNQ9NQX3 736 aaPredicted RBP20.79■□□□□ 0.92
SSB-201ENST00000260956 IARSP41252 1262 aaKnown RBP20.78■□□□□ 0.92
SSB-201ENST00000260956 ALX1Q15699 326 aa20.78■□□□□ 0.92
SSB-201ENST00000260956 AOC3Q16853 763 aa20.78■□□□□ 0.92
SSB-201ENST00000260956 FERMT3Q86UX7 667 aa20.78■□□□□ 0.92
SSB-201ENST00000260956 NKX2-3Q8TAU0 364 aa20.78■□□□□ 0.92
SSB-201ENST00000260956 TBC1D16Q8TBP0 767 aa20.78■□□□□ 0.92
SSB-201ENST00000260956 RTN4Q9NQC3 1192 aaKnown RBP20.78■□□□□ 0.92
SSB-201ENST00000260956 PODXL2Q9NZ53 605 aa20.78■□□□□ 0.92
SSB-201ENST00000260956 CCDC88AQ3V6T2 1871 aa20.78■□□□□ 0.92
SSB-201ENST00000260956 HAND2P61296 217 aa20.78■□□□□ 0.92
SSB-201ENST00000260956 CSPP1Q1MSJ5 1256 aa20.78■□□□□ 0.92
SSB-201ENST00000260956 FAM173BQ6P4H8 233 aa20.78■□□□□ 0.92
SSB-201ENST00000260956 TBC1D10CQ8IV04 446 aa20.78■□□□□ 0.92
SSB-201ENST00000260956 STRBPQ96SI9 672 aaKnown RBP20.78■□□□□ 0.92
SSB-201ENST00000260956 MPHOSPH8Q99549 860 aa20.78■□□□□ 0.92
SSB-201ENST00000260956 FUCA2Q9BTY2 467 aa20.78■□□□□ 0.92
SSB-201ENST00000260956 HPS5Q9UPZ3 1129 aa20.78■□□□□ 0.92
SSB-201ENST00000260956 ECM29Q5VYK3 1845 aa20.77■□□□□ 0.92
SSB-201ENST00000260956 PTPDC1A2A3K4 754 aa20.77■□□□□ 0.92
SSB-201ENST00000260956 KRT85P78386 507 aa20.77■□□□□ 0.92
SSB-201ENST00000260956 GRIPAP1Q4V328 841 aa20.77■□□□□ 0.92
SSB-201ENST00000260956 NAA16Q6N069 864 aaPredicted RBP20.77■□□□□ 0.92
SSB-201ENST00000260956 TMX4Q9H1E5 349 aaPredicted RBP20.77■□□□□ 0.92
SSB-201ENST00000260956 ANKIB1Q9P2G1 1089 aa20.77■□□□□ 0.92
SSB-201ENST00000260956 CHRNDQ07001 517 aa20.76■□□□□ 0.91
SSB-201ENST00000260956 EPB41L4AQ9HCS5 686 aaPredicted RBP20.76■□□□□ 0.91
SSB-201ENST00000260956 IDH1O75874 414 aaKnown RBP20.75■□□□□ 0.91
SSB-201ENST00000260956 ADD1P35611 737 aaKnown RBP20.75■□□□□ 0.91
SSB-201ENST00000260956 HMGN5P82970 282 aaKnown RBP20.75■□□□□ 0.91
SSB-201ENST00000260956 CHST3Q7LGC8 479 aa20.75■□□□□ 0.91
SSB-201ENST00000260956 C6orf229H3BNL8 230 aa20.75■□□□□ 0.91
SSB-201ENST00000260956 PRC1O43663 620 aa20.75■□□□□ 0.91
SSB-201ENST00000260956 UFL1O94874 794 aa20.75■□□□□ 0.91
SSB-201ENST00000260956 KLRK1P26718 216 aa20.75■□□□□ 0.91
SSB-201ENST00000260956 TSPY26PQ9H489 355 aa20.75■□□□□ 0.91
SSB-201ENST00000260956 NCOA5Q9HCD5 579 aaKnown RBP20.75■□□□□ 0.91
SSB-201ENST00000260956 XDHP47989 1333 aa20.75■□□□□ 0.91
SSB-201ENST00000260956 RIMBP2O15034 1052 aa20.74■□□□□ 0.91
SSB-201ENST00000260956 PPIP5K2O43314 1243 aa20.74■□□□□ 0.91
SSB-201ENST00000260956 FDPSP14324 419 aaKnown RBP20.74■□□□□ 0.91
SSB-201ENST00000260956 MCM5P33992 734 aa20.74■□□□□ 0.91
SSB-201ENST00000260956 KIAA2012Q0VF49 1180 aa20.74■□□□□ 0.91
SSB-201ENST00000260956 TXNRD3Q86VQ6 643 aa20.74■□□□□ 0.91
SSB-201ENST00000260956 LEO1Q8WVC0 666 aaPredicted RBP20.74■□□□□ 0.91
SSB-201ENST00000260956 DENND2AQ9ULE3 1009 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms