RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 PRDM4Q9UKN5 801 aa15.57■□□□□ 0.08
VHL-201ENST00000256474 PES1O00541 588 aaKnown RBP15.57■□□□□ 0.08
VHL-201ENST00000256474 STARD3NLO95772 234 aa15.57■□□□□ 0.08
VHL-201ENST00000256474 ZFYP08048 801 aaPredicted RBP15.57■□□□□ 0.08
VHL-201ENST00000256474 CASP1P29466 404 aa15.57■□□□□ 0.08
VHL-201ENST00000256474 GUCY1A2P33402 732 aa15.57■□□□□ 0.08
VHL-201ENST00000256474 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.57■□□□□ 0.08
VHL-201ENST00000256474 PALLDQ8WX93 1383 aa15.57■□□□□ 0.08
VHL-201ENST00000256474 SLU7O95391 586 aaKnown RBP15.57■□□□□ 0.08
VHL-201ENST00000256474 ADKP55263 362 aaKnown RBP15.57■□□□□ 0.08
VHL-201ENST00000256474 GSDMDP57764 484 aa15.57■□□□□ 0.08
VHL-201ENST00000256474 NLRP12P59046 1061 aa15.57■□□□□ 0.08
VHL-201ENST00000256474 NR5A1Q13285 461 aa15.57■□□□□ 0.08
VHL-201ENST00000256474 CCDC102BQ68D86 513 aa15.57■□□□□ 0.08
VHL-201ENST00000256474 FBXO38Q6PIJ6 1188 aa15.57■□□□□ 0.08
VHL-201ENST00000256474 ANKRD7Q92527 254 aa15.57■□□□□ 0.08
VHL-201ENST00000256474 JAG2Q9Y219 1238 aa15.57■□□□□ 0.08
VHL-201ENST00000256474 PDE6AP16499 860 aa15.56■□□□□ 0.08
VHL-201ENST00000256474 GRIN1Q05586 938 aa15.56■□□□□ 0.08
VHL-201ENST00000256474 KARSQ15046 597 aaKnown RBP15.56■□□□□ 0.08
VHL-201ENST00000256474 E4F1Q66K89 784 aaPredicted RBP15.56■□□□□ 0.08
VHL-201ENST00000256474 APOA5Q6Q788 366 aa15.56■□□□□ 0.08
VHL-201ENST00000256474 PPP1R13BQ96KQ4 1090 aa15.56■□□□□ 0.08
VHL-201ENST00000256474 PCDHA5Q9Y5H7 936 aa15.56■□□□□ 0.08
VHL-201ENST00000256474 NEDD4P46934 1319 aa15.56■□□□□ 0.08
VHL-201ENST00000256474 POLR3GO15318 223 aaPredicted RBP15.56■□□□□ 0.08
VHL-201ENST00000256474 POLR2DO15514 142 aaKnown RBP15.56■□□□□ 0.08
VHL-201ENST00000256474 NEMFO60524 1076 aa15.56■□□□□ 0.08
VHL-201ENST00000256474 SSRP1Q08945 709 aaKnown RBP15.56■□□□□ 0.08
VHL-201ENST00000256474 KMT5BQ4FZB7 885 aa15.56■□□□□ 0.08
VHL-201ENST00000256474 SARM1Q6SZW1 724 aa15.56■□□□□ 0.08
VHL-201ENST00000256474 CADPS2Q86UW7 1296 aa15.56■□□□□ 0.08
VHL-201ENST00000256474 JMYQ8N9B5 988 aa15.56■□□□□ 0.08
VHL-201ENST00000256474 DESI2Q9BSY9 194 aa15.56■□□□□ 0.08
VHL-201ENST00000256474 CTIFO43310 598 aaKnown RBP15.55■□□□□ 0.08
VHL-201ENST00000256474 YEATS4O95619 227 aa15.55■□□□□ 0.08
VHL-201ENST00000256474 ARHGAP29Q52LW3 1261 aa15.55■□□□□ 0.08
VHL-201ENST00000256474 BICDL1Q6ZP65 573 aa15.55■□□□□ 0.08
VHL-201ENST00000256474 BRAPQ7Z569 592 aa15.55■□□□□ 0.08
VHL-201ENST00000256474 ACSBG1Q96GR2 724 aa15.55■□□□□ 0.08
VHL-201ENST00000256474 SEC31BQ9NQW1 1179 aa15.55■□□□□ 0.08
VHL-201ENST00000256474 ZBTB1Q9Y2K1 713 aa15.55■□□□□ 0.08
VHL-201ENST00000256474 MED1Q15648 1581 aaPredicted RBP15.55■□□□□ 0.08
VHL-201ENST00000256474 ERICH2A1L162 156 aa15.55■□□□□ 0.08
VHL-201ENST00000256474 SMIM22K7EJ46 135 aa15.55■□□□□ 0.08
VHL-201ENST00000256474 SHC4Q6S5L8 630 aa15.55■□□□□ 0.08
VHL-201ENST00000256474 ZSWIM5Q9P217 1185 aa15.55■□□□□ 0.08
VHL-201ENST00000256474 KCNH3Q9ULD8 1083 aa15.55■□□□□ 0.08
VHL-201ENST00000256474 FER1L4A9Z1Z3 1794 aa15.55■□□□□ 0.08
VHL-201ENST00000256474 KDM3BQ7LBC6 1761 aa15.55■□□□□ 0.08
VHL-201ENST00000256474 AKAP17AQ02040 695 aaKnown RBP15.55■□□□□ 0.08
VHL-201ENST00000256474 DMTNQ08495 405 aa15.55■□□□□ 0.08
VHL-201ENST00000256474 DIS3L2Q8IYB7 885 aaKnown RBP15.55■□□□□ 0.08
VHL-201ENST00000256474 PIGBQ92521 554 aa15.55■□□□□ 0.08
VHL-201ENST00000256474 SLC4A4Q9Y6R1 1079 aa15.55■□□□□ 0.08
VHL-201ENST00000256474 TTLL11Q8NHH1 800 aa15.54■□□□□ 0.08
VHL-201ENST00000256474 SDR42E1Q8WUS8 393 aa15.54■□□□□ 0.08
VHL-201ENST00000256474 POLR3EQ9NVU0 708 aa15.54■□□□□ 0.08
VHL-201ENST00000256474 CDKL5O76039 1030 aa15.54■□□□□ 0.08
VHL-201ENST00000256474 CABP5Q9NP86 173 aa15.54■□□□□ 0.08
VHL-201ENST00000256474 SALL1Q9NSC2 1324 aa15.54■□□□□ 0.08
VHL-201ENST00000256474 BCAMP50895 628 aa15.54■□□□□ 0.08
VHL-201ENST00000256474 GNG11P61952 73 aa15.54■□□□□ 0.08
VHL-201ENST00000256474 TEX35Q5T0J7 233 aa15.54■□□□□ 0.08
VHL-201ENST00000256474 AXDND1Q5T1B0 1012 aaPredicted RBP15.54■□□□□ 0.08
VHL-201ENST00000256474 MFSD6Q6ZSS7 791 aa15.54■□□□□ 0.08
VHL-201ENST00000256474 UBXN4Q92575 508 aa15.54■□□□□ 0.08
VHL-201ENST00000256474 DHX58Q96C10 678 aa15.54■□□□□ 0.08
VHL-201ENST00000256474 GPR108Q9NPR9 543 aa15.54■□□□□ 0.08
VHL-201ENST00000256474 RAI14Q9P0K7 980 aa15.54■□□□□ 0.08
VHL-201ENST00000256474 CMA1P23946 247 aa15.53■□□□□ 0.08
VHL-201ENST00000256474 CDC25BP30305 580 aa15.53■□□□□ 0.08
VHL-201ENST00000256474 ADD2P35612 726 aa15.53■□□□□ 0.08
VHL-201ENST00000256474 MYL5Q02045 173 aa15.53■□□□□ 0.08
VHL-201ENST00000256474 SLC39A14Q15043 492 aa15.53■□□□□ 0.08
VHL-201ENST00000256474 TRIM22Q8IYM9 498 aa15.53■□□□□ 0.08
VHL-201ENST00000256474 ZBTB38Q8NAP3 1195 aaPredicted RBP15.53■□□□□ 0.08
VHL-201ENST00000256474 JCADQ9P266 1359 aa15.53■□□□□ 0.08
VHL-201ENST00000256474 USP49Q70CQ1 688 aa15.53■□□□□ 0.08
VHL-201ENST00000256474 CARD6Q9BX69 1037 aa15.53■□□□□ 0.08
VHL-201ENST00000256474 OGFRQ9NZT2 677 aa15.53■□□□□ 0.08
VHL-201ENST00000256474 SERTAD1Q9UHV2 236 aa15.53■□□□□ 0.08
VHL-201ENST00000256474 A0A1W2PQ27 194 aa15.53■□□□□ 0.08
VHL-201ENST00000256474 A0A1W2PQ64 194 aa15.53■□□□□ 0.08
VHL-201ENST00000256474 A0A1W2PQD8 194 aa15.53■□□□□ 0.08
VHL-201ENST00000256474 RANBP6O60518 1105 aaKnown RBP15.53■□□□□ 0.08
VHL-201ENST00000256474 SMYD4Q8IYR2 804 aaPredicted RBP15.53■□□□□ 0.08
VHL-201ENST00000256474 CCDC24Q8N4L8 307 aa15.53■□□□□ 0.08
VHL-201ENST00000256474 AGXT2Q9BYV1 514 aa15.53■□□□□ 0.08
VHL-201ENST00000256474 CIAO1O76071 339 aa15.52■□□□□ 0.08
VHL-201ENST00000256474 ATL3Q6DD88 541 aa15.52■□□□□ 0.08
VHL-201ENST00000256474 CCDC150Q8NCX0 1101 aa15.52■□□□□ 0.08
VHL-201ENST00000256474 UBAC1Q9BSL1 405 aa15.52■□□□□ 0.08
VHL-201ENST00000256474 NBPF3Q9H094 633 aa15.52■□□□□ 0.08
VHL-201ENST00000256474 CYP2D7A0A087X1C5 515 aa15.52■□□□□ 0.07
VHL-201ENST00000256474 CTSWP56202 376 aa15.52■□□□□ 0.07
VHL-201ENST00000256474 PDE4BQ07343 736 aa15.52■□□□□ 0.07
VHL-201ENST00000256474 MAP3K12Q12852 859 aa15.52■□□□□ 0.07
VHL-201ENST00000256474 DZIP3Q86Y13 1208 aaKnown RBP15.52■□□□□ 0.07
VHL-201ENST00000256474 ZNF397Q8NF99 534 aaPredicted RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms