RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 PDE8BO95263 885 aa11.76□□□□□ -0.53
COPB1-201ENST00000249923 FGFR2P21802 821 aa11.76□□□□□ -0.53
COPB1-201ENST00000249923 BCORQ6W2J9 1755 aa11.76□□□□□ -0.53
COPB1-201ENST00000249923 BIN1O00499 593 aa11.76□□□□□ -0.53
COPB1-201ENST00000249923 SPTLC2O15270 562 aa11.76□□□□□ -0.53
COPB1-201ENST00000249923 CAVIN2O95810 425 aa11.76□□□□□ -0.53
COPB1-201ENST00000249923 PFKFB1P16118 471 aa11.76□□□□□ -0.53
COPB1-201ENST00000249923 PDE6AP16499 860 aa11.76□□□□□ -0.53
COPB1-201ENST00000249923 MARCKSP29966 332 aaPredicted RBP11.76□□□□□ -0.53
COPB1-201ENST00000249923 PTPAQ15257 358 aa11.76□□□□□ -0.53
COPB1-201ENST00000249923 APOA5Q6Q788 366 aa11.76□□□□□ -0.53
COPB1-201ENST00000249923 KIF6Q6ZMV9 814 aa11.76□□□□□ -0.53
COPB1-201ENST00000249923 ZNF512BQ96KM6 892 aaPredicted RBP11.76□□□□□ -0.53
COPB1-201ENST00000249923 MAP3K14Q99558 947 aa11.76□□□□□ -0.53
COPB1-201ENST00000249923 TIAM2Q8IVF5 1701 aa11.76□□□□□ -0.53
COPB1-201ENST00000249923 IRS4O14654 1257 aaPredicted RBP11.76□□□□□ -0.53
COPB1-201ENST00000249923 ZBTB22O15209 634 aa11.76□□□□□ -0.53
COPB1-201ENST00000249923 ARID4AP29374 1257 aaPredicted RBP11.76□□□□□ -0.53
COPB1-201ENST00000249923 SHC4Q6S5L8 630 aa11.76□□□□□ -0.53
COPB1-201ENST00000249923 NYAP1Q6ZVC0 841 aa11.76□□□□□ -0.53
COPB1-201ENST00000249923 CCAR2Q8N163 923 aaKnown RBP11.76□□□□□ -0.53
COPB1-201ENST00000249923 KAT6BQ8WYB5 2073 aa11.75□□□□□ -0.53
COPB1-201ENST00000249923 ZMYM6O95789 1325 aa11.75□□□□□ -0.53
COPB1-201ENST00000249923 WDR19Q8NEZ3 1342 aa11.75□□□□□ -0.53
COPB1-201ENST00000249923 BECN2A8MW95 431 aa11.75□□□□□ -0.53
COPB1-201ENST00000249923 IDH1O75874 414 aaKnown RBP11.75□□□□□ -0.53
COPB1-201ENST00000249923 ZNF202O95125 648 aa11.75□□□□□ -0.53
COPB1-201ENST00000249923 YEATS4O95619 227 aa11.75□□□□□ -0.53
COPB1-201ENST00000249923 TAF7LQ5H9L4 462 aa11.75□□□□□ -0.53
COPB1-201ENST00000249923 FAM177A1Q8N128 213 aaPredicted RBP11.75□□□□□ -0.53
COPB1-201ENST00000249923 STK11IPQ8N1F8 1099 aa11.75□□□□□ -0.53
COPB1-201ENST00000249923 STRBPQ96SI9 672 aaKnown RBP11.75□□□□□ -0.53
COPB1-201ENST00000249923 LY9Q9HBG7 655 aa11.75□□□□□ -0.53
COPB1-201ENST00000249923 ANGEL1Q9UNK9 670 aaKnown RBP11.75□□□□□ -0.53
COPB1-201ENST00000249923 TBC1D2BQ9UPU7 963 aa11.75□□□□□ -0.53
COPB1-201ENST00000249923 GUCY1A2P33402 732 aa11.75□□□□□ -0.53
COPB1-201ENST00000249923 ANO1Q5XXA6 986 aa11.75□□□□□ -0.53
COPB1-201ENST00000249923 VPS37DQ86XT2 251 aa11.75□□□□□ -0.53
COPB1-201ENST00000249923 ANO10Q9NW15 660 aa11.75□□□□□ -0.53
COPB1-201ENST00000249923 PHLPP1O60346 1717 aa11.75□□□□□ -0.53
COPB1-201ENST00000249923 DOT1LQ8TEK3 1739 aa11.75□□□□□ -0.53
COPB1-201ENST00000249923 CCDC69A6NI79 296 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 WTIPA6NIX2 430 aaPredicted RBP11.74□□□□□ -0.53
COPB1-201ENST00000249923 GOLGA6L19H0YKK7 550 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 TNNT1P13805 278 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 RASGRF1Q13972 1273 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 SKIDA1Q1XH10 827 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 ISM2Q6H9L7 571 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 ARMCX5Q6P1M9 558 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 SHISA4Q96DD7 197 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 BTG4Q9NY30 223 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 HPSEQ9Y251 543 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 CTDSPL2Q05D32 466 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 STK38Q15208 465 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 SF3A1Q15459 793 aaKnown RBP11.74□□□□□ -0.53
COPB1-201ENST00000249923 FOXP4Q8IVH2 680 aaPredicted RBP11.74□□□□□ -0.53
COPB1-201ENST00000249923 CLIC6Q96NY7 704 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 BCL9LQ86UU0 1499 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 PRKAB2O43741 272 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 ATP1A3P13637 1013 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 UBE3CQ15386 1083 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 KRT40Q6A162 431 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 MICU3Q86XE3 530 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 KCNG4Q8TDN1 519 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 CNNM1Q9NRU3 951 aa11.74□□□□□ -0.53
COPB1-201ENST00000249923 MYH14Q7Z406 1995 aaKnown RBP11.73□□□□□ -0.53
COPB1-201ENST00000249923 COL16A1Q07092 1604 aaPredicted RBP11.73□□□□□ -0.53
COPB1-201ENST00000249923 SKILP12757 684 aa11.73□□□□□ -0.53
COPB1-201ENST00000249923 BMP6P22004 513 aa11.73□□□□□ -0.53
COPB1-201ENST00000249923 EVA1CP58658 441 aa11.73□□□□□ -0.53
COPB1-201ENST00000249923 GRIN1Q05586 938 aa11.73□□□□□ -0.53
COPB1-201ENST00000249923 SLC39A14Q15043 492 aa11.73□□□□□ -0.53
COPB1-201ENST00000249923 PTPN21Q16825 1174 aa11.73□□□□□ -0.53
COPB1-201ENST00000249923 BRAPQ7Z569 592 aa11.73□□□□□ -0.53
COPB1-201ENST00000249923 RALYLQ86SE5 291 aaKnown RBP11.73□□□□□ -0.53
COPB1-201ENST00000249923 SDF4Q9BRK5 362 aa11.73□□□□□ -0.53
COPB1-201ENST00000249923 XPO4Q9C0E2 1151 aaKnown RBP11.73□□□□□ -0.53
COPB1-201ENST00000249923 TMX1Q9H3N1 280 aa11.73□□□□□ -0.53
COPB1-201ENST00000249923 SEC31BQ9NQW1 1179 aa11.73□□□□□ -0.53
COPB1-201ENST00000249923 TRMT112Q9UI30 125 aaKnown RBP11.73□□□□□ -0.53
COPB1-201ENST00000249923 WNK3Q9BYP7 1800 aa11.73□□□□□ -0.53
COPB1-201ENST00000249923 CEP57L1Q8IYX8 460 aa11.73□□□□□ -0.53
COPB1-201ENST00000249923 TAF1P21675 1872 aa11.73□□□□□ -0.53
COPB1-201ENST00000249923 PLCH1Q4KWH8 1693 aa11.73□□□□□ -0.53
COPB1-201ENST00000249923 ANKRD18BA2A2Z9 1011 aa11.73□□□□□ -0.53
COPB1-201ENST00000249923 STARD3NLO95772 234 aa11.73□□□□□ -0.53
COPB1-201ENST00000249923 METAP2P50579 478 aaKnown RBP eCLIP11.73□□□□□ -0.532e-6■■■■□ 21.6
COPB1-201ENST00000249923 ZNF34Q8IZ26 560 aa11.73□□□□□ -0.53
COPB1-201ENST00000249923 ALG1Q9BT22 464 aa11.73□□□□□ -0.53
COPB1-201ENST00000249923 ZSWIM5Q9P217 1185 aa11.73□□□□□ -0.53
COPB1-201ENST00000249923 GOLGB1Q14789 3259 aaKnown RBP11.72□□□□□ -0.53
COPB1-201ENST00000249923 FANCGO15287 622 aa11.72□□□□□ -0.53
COPB1-201ENST00000249923 FOXN1O15353 648 aa11.72□□□□□ -0.53
COPB1-201ENST00000249923 CMA1P23946 247 aa11.72□□□□□ -0.53
COPB1-201ENST00000249923 E4F1Q66K89 784 aaPredicted RBP11.72□□□□□ -0.53
COPB1-201ENST00000249923 ADGRA1Q86SQ6 560 aa11.72□□□□□ -0.53
COPB1-201ENST00000249923 CCDC112Q8NEF3 446 aa11.72□□□□□ -0.53
COPB1-201ENST00000249923 DPF2Q92785 391 aa11.72□□□□□ -0.53
COPB1-201ENST00000249923 BPIFA3Q9BQP9 254 aa11.72□□□□□ -0.53
COPB1-201ENST00000249923 CPLX1O14810 134 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms