RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 LAPTM4AQ15012 233 aa11.83□□□□□ -0.52
TTC1-201ENST00000231238 LRRC24Q50LG9 513 aa11.83□□□□□ -0.52
TTC1-201ENST00000231238 PPP2R2DQ66LE6 453 aa11.83□□□□□ -0.52
TTC1-201ENST00000231238 ERICH6Q7L0X2 663 aa11.83□□□□□ -0.52
TTC1-201ENST00000231238 C22orf23Q9BZE7 217 aa11.83□□□□□ -0.52
TTC1-201ENST00000231238 USP42Q9H9J4 1324 aaKnown RBP11.82□□□□□ -0.52
TTC1-201ENST00000231238 PLSCR1O15162 318 aa11.82□□□□□ -0.52
TTC1-201ENST00000231238 REC8O95072 547 aa11.82□□□□□ -0.52
TTC1-201ENST00000231238 F12P00748 615 aaPredicted RBP11.82□□□□□ -0.52
TTC1-201ENST00000231238 ERFEQ4G0M1 354 aa11.82□□□□□ -0.52
TTC1-201ENST00000231238 CDC5LQ99459 802 aaKnown RBP11.82□□□□□ -0.52
TTC1-201ENST00000231238 PUS3Q9BZE2 481 aaKnown RBP11.82□□□□□ -0.52
TTC1-201ENST00000231238 UNC93B1Q9H1C4 597 aa11.82□□□□□ -0.52
TTC1-201ENST00000231238 MAP10Q9P2G4 905 aa11.82□□□□□ -0.52
TTC1-201ENST00000231238 CTDSPL2Q05D32 466 aa11.81□□□□□ -0.52
TTC1-201ENST00000231238 ATG9AQ7Z3C6 839 aa11.81□□□□□ -0.52
TTC1-201ENST00000231238 PI4K2BQ8TCG2 481 aa11.81□□□□□ -0.52
TTC1-201ENST00000231238 NLRP3Q96P20 1036 aa11.81□□□□□ -0.52
TTC1-201ENST00000231238 BOLA2Q9H3K6 86 aa11.81□□□□□ -0.52
TTC1-201ENST00000231238 GPR108Q9NPR9 543 aa11.81□□□□□ -0.52
TTC1-201ENST00000231238 DIAPH3Q9NSV4 1193 aa11.81□□□□□ -0.52
TTC1-201ENST00000231238 RGS17Q9UGC6 210 aaPredicted RBP11.81□□□□□ -0.52
TTC1-201ENST00000231238 LCE2BO14633 110 aa11.8□□□□□ -0.52
TTC1-201ENST00000231238 CCDC158Q5M9N0 1113 aa11.8□□□□□ -0.52
TTC1-201ENST00000231238 IPO9Q96P70 1041 aaKnown RBP11.8□□□□□ -0.52
TTC1-201ENST00000231238 DBNDD2Q9BQY9 259 aa11.8□□□□□ -0.52
TTC1-201ENST00000231238 TLR7Q9NYK1 1049 aaKnown RBP11.8□□□□□ -0.52
TTC1-201ENST00000231238 BCORQ6W2J9 1755 aa11.8□□□□□ -0.52
TTC1-201ENST00000231238 SCN7AQ01118 1682 aa11.79□□□□□ -0.52
TTC1-201ENST00000231238 CARMIL3Q8ND23 1372 aa11.79□□□□□ -0.52
TTC1-201ENST00000231238 A0A1B0GUL7 405 aa11.79□□□□□ -0.52
TTC1-201ENST00000231238 TIMM10P62072 90 aa11.79□□□□□ -0.52
TTC1-201ENST00000231238 ATP2B3Q16720 1220 aa11.79□□□□□ -0.52
TTC1-201ENST00000231238 TTC39AQ5SRH9 613 aa11.79□□□□□ -0.52
TTC1-201ENST00000231238 ANKRD18AQ8IVF6 992 aa11.79□□□□□ -0.52
TTC1-201ENST00000231238 CNBD1Q8NA66 436 aa11.79□□□□□ -0.52
TTC1-201ENST00000231238 FLAD1Q8NFF5 587 aa11.79□□□□□ -0.52
TTC1-201ENST00000231238 RUFY2Q8WXA3 655 aa11.79□□□□□ -0.52
TTC1-201ENST00000231238 EVI5LQ96CN4 794 aa11.79□□□□□ -0.52
TTC1-201ENST00000231238 TBC1D32Q96NH3 1257 aa11.79□□□□□ -0.52
TTC1-201ENST00000231238 DNAJC2Q99543 621 aaKnown RBP11.79□□□□□ -0.52
TTC1-201ENST00000231238 FSD1Q9BTV5 496 aa11.79□□□□□ -0.52
TTC1-201ENST00000231238 DBNLQ9UJU6 430 aaKnown RBP11.79□□□□□ -0.52
TTC1-201ENST00000231238 TAF1LQ8IZX4 1826 aa11.79□□□□□ -0.52
TTC1-201ENST00000231238 MROH5Q6ZUA9 1318 aa11.79□□□□□ -0.52
TTC1-201ENST00000231238 HIP1O00291 1037 aa11.78□□□□□ -0.52
TTC1-201ENST00000231238 MCCP23508 829 aa11.78□□□□□ -0.52
TTC1-201ENST00000231238 CTHP32929 405 aa11.78□□□□□ -0.52
TTC1-201ENST00000231238 ST5P78524 1137 aa11.78□□□□□ -0.52
TTC1-201ENST00000231238 BECN1Q14457 450 aa11.78□□□□□ -0.52
TTC1-201ENST00000231238 KIAA1211Q6ZU35 1233 aa11.78□□□□□ -0.52
TTC1-201ENST00000231238 AMIGO3Q86WK7 504 aa11.78□□□□□ -0.52
TTC1-201ENST00000231238 HELBQ8NG08 1087 aaPredicted RBP11.78□□□□□ -0.52
TTC1-201ENST00000231238 WNT7AO00755 349 aa11.77□□□□□ -0.52
TTC1-201ENST00000231238 ATP5JP18859 108 aa11.77□□□□□ -0.52
TTC1-201ENST00000231238 CHMLP26374 656 aa11.77□□□□□ -0.52
TTC1-201ENST00000231238 NFIXQ14938 502 aa11.77□□□□□ -0.52
TTC1-201ENST00000231238 Q6ZNB5 142 aa11.77□□□□□ -0.52
TTC1-201ENST00000231238 DDX46Q7L014 1031 aaKnown RBP11.77□□□□□ -0.52
TTC1-201ENST00000231238 BAP1Q92560 729 aa11.77□□□□□ -0.52
TTC1-201ENST00000231238 ANO2Q9NQ90 1003 aa11.77□□□□□ -0.52
TTC1-201ENST00000231238 SEC31BQ9NQW1 1179 aa11.77□□□□□ -0.52
TTC1-201ENST00000231238 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.77□□□□□ -0.52
TTC1-201ENST00000231238 IFIT1P09914 478 aaKnown RBP11.76□□□□□ -0.53
TTC1-201ENST00000231238 SLC5A1P13866 664 aa11.76□□□□□ -0.53
TTC1-201ENST00000231238 WNT7BP56706 349 aa11.76□□□□□ -0.53
TTC1-201ENST00000231238 SH3BP2P78314 561 aa11.76□□□□□ -0.53
TTC1-201ENST00000231238 PCMTD1Q96MG8 357 aaPredicted RBP11.76□□□□□ -0.53
TTC1-201ENST00000231238 ESYT1Q9BSJ8 1104 aa11.76□□□□□ -0.53
TTC1-201ENST00000231238 TOR4AQ9NXH8 423 aa11.76□□□□□ -0.53
TTC1-201ENST00000231238 RIPOR2Q9Y4F9 1068 aa11.76□□□□□ -0.53
TTC1-201ENST00000231238 ZNF609O15014 1411 aa11.76□□□□□ -0.53
TTC1-201ENST00000231238 MYH3P11055 1940 aa11.76□□□□□ -0.53
TTC1-201ENST00000231238 RTL9Q8NET4 1388 aa11.76□□□□□ -0.53
TTC1-201ENST00000231238 GYS1P13807 737 aa11.76□□□□□ -0.53
TTC1-201ENST00000231238 BAG6P46379 1132 aa11.76□□□□□ -0.53
TTC1-201ENST00000231238 SF3B3Q15393 1217 aaKnown RBP11.76□□□□□ -0.53
TTC1-201ENST00000231238 PUM3Q15397 648 aaKnown RBP11.76□□□□□ -0.53
TTC1-201ENST00000231238 LRRFIP1Q32MZ4 808 aaKnown RBP11.76□□□□□ -0.53
TTC1-201ENST00000231238 SLC10A5Q5PT55 438 aa11.76□□□□□ -0.53
TTC1-201ENST00000231238 CWC27Q6UX04 472 aaKnown RBP11.76□□□□□ -0.53
TTC1-201ENST00000231238 XAGE2Q96GT9 111 aa11.76□□□□□ -0.53
TTC1-201ENST00000231238 MRGPRX2Q96LB1 330 aa11.76□□□□□ -0.53
TTC1-201ENST00000231238 STK32BQ9NY57 414 aa11.76□□□□□ -0.53
TTC1-201ENST00000231238 ABCC12Q96J65 1359 aa11.75□□□□□ -0.53
TTC1-201ENST00000231238 PDE8BO95263 885 aa11.75□□□□□ -0.53
TTC1-201ENST00000231238 SERPINB2P05120 415 aa11.75□□□□□ -0.53
TTC1-201ENST00000231238 KCNJ4P48050 445 aa11.75□□□□□ -0.53
TTC1-201ENST00000231238 LINC01559Q495D7 138 aa11.75□□□□□ -0.53
TTC1-201ENST00000231238 NLGN1Q8N2Q7 840 aa11.75□□□□□ -0.53
TTC1-201ENST00000231238 LRRN4Q8WUT4 740 aa11.75□□□□□ -0.53
TTC1-201ENST00000231238 RPGRQ92834 1020 aaKnown RBP11.75□□□□□ -0.53
TTC1-201ENST00000231238 RFC5P40937 340 aa11.74□□□□□ -0.53
TTC1-201ENST00000231238 FKBP4Q02790 459 aaKnown RBP eCLIP11.74□□□□□ -0.53
TTC1-201ENST00000231238 ZNF827Q17R98 1081 aa11.74□□□□□ -0.53
TTC1-201ENST00000231238 LPIN2Q92539 896 aa11.74□□□□□ -0.53
TTC1-201ENST00000231238 HAUS7Q99871 368 aa11.74□□□□□ -0.53
TTC1-201ENST00000231238 RIC1Q4ADV7 1423 aa11.73□□□□□ -0.53
TTC1-201ENST00000231238 C4AP0C0L4 1744 aa11.73□□□□□ -0.53
TTC1-201ENST00000231238 GOLIM4O00461 696 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms