RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 PTPAQ15257 358 aa16.09■□□□□ 0.17
SCNN1A-201ENST00000228916 C4AP0C0L4 1744 aa16.09■□□□□ 0.17
SCNN1A-201ENST00000228916 C4BP0C0L5 1744 aa16.09■□□□□ 0.17
SCNN1A-201ENST00000228916 TRPM3Q9HCF6 1732 aaPredicted RBP16.09■□□□□ 0.17
SCNN1A-201ENST00000228916 FOXO4P98177 505 aa16.09■□□□□ 0.17
SCNN1A-201ENST00000228916 ANKLE2Q86XL3 938 aa16.09■□□□□ 0.17
SCNN1A-201ENST00000228916 PARD6BQ9BYG5 372 aa16.09■□□□□ 0.17
SCNN1A-201ENST00000228916 MEGF6O75095 1541 aa16.08■□□□□ 0.17
SCNN1A-201ENST00000228916 CPLX1O14810 134 aa16.08■□□□□ 0.17
SCNN1A-201ENST00000228916 IFIT1P09914 478 aaKnown RBP16.08■□□□□ 0.17
SCNN1A-201ENST00000228916 ANTXR2P58335 489 aa16.08■□□□□ 0.17
SCNN1A-201ENST00000228916 RESP18Q5W5W9 173 aa16.08■□□□□ 0.17
SCNN1A-201ENST00000228916 OLFM4Q6UX06 510 aa16.08■□□□□ 0.17
SCNN1A-201ENST00000228916 METTL16Q86W50 562 aaKnown RBP16.08■□□□□ 0.17
SCNN1A-201ENST00000228916 FAM177A1Q8N128 213 aaPredicted RBP16.08■□□□□ 0.17
SCNN1A-201ENST00000228916 JMYQ8N9B5 988 aa16.08■□□□□ 0.17
SCNN1A-201ENST00000228916 IMMTQ16891 758 aaKnown RBP16.08■□□□□ 0.16
SCNN1A-201ENST00000228916 TRERF1Q96PN7 1200 aa16.08■□□□□ 0.16
SCNN1A-201ENST00000228916 NLRP2Q9NX02 1062 aa16.08■□□□□ 0.16
SCNN1A-201ENST00000228916 PSD3Q9NYI0 1048 aa16.08■□□□□ 0.16
SCNN1A-201ENST00000228916 PTPN21Q16825 1174 aa16.08■□□□□ 0.16
SCNN1A-201ENST00000228916 KRBA2Q6ZNG9 492 aa16.08■□□□□ 0.16
SCNN1A-201ENST00000228916 FOXP4Q8IVH2 680 aaPredicted RBP16.08■□□□□ 0.16
SCNN1A-201ENST00000228916 TC2NQ8N9U0 490 aa16.08■□□□□ 0.16
SCNN1A-201ENST00000228916 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.08■□□□□ 0.16
SCNN1A-201ENST00000228916 WDR19Q8NEZ3 1342 aa16.07■□□□□ 0.16
SCNN1A-201ENST00000228916 IL15P40933 162 aaPredicted RBP16.07■□□□□ 0.16
SCNN1A-201ENST00000228916 JAKMIP3Q5VZ66 844 aa16.07■□□□□ 0.16
SCNN1A-201ENST00000228916 TTC5Q8N0Z6 440 aa16.07■□□□□ 0.16
SCNN1A-201ENST00000228916 CCDC34Q96HJ3 373 aa16.07■□□□□ 0.16
SCNN1A-201ENST00000228916 MAP3K14Q99558 947 aa16.07■□□□□ 0.16
SCNN1A-201ENST00000228916 BMP6P22004 513 aa16.07■□□□□ 0.16
SCNN1A-201ENST00000228916 HAND2P61296 217 aa16.07■□□□□ 0.16
SCNN1A-201ENST00000228916 TOGARAM2Q6ZUX3 1019 aa16.07■□□□□ 0.16
SCNN1A-201ENST00000228916 VPS37DQ86XT2 251 aa16.07■□□□□ 0.16
SCNN1A-201ENST00000228916 GOLGA1Q92805 767 aa16.07■□□□□ 0.16
SCNN1A-201ENST00000228916 EXOC4Q96A65 974 aa16.07■□□□□ 0.16
SCNN1A-201ENST00000228916 DNAJC5Q9H3Z4 198 aa16.07■□□□□ 0.16
SCNN1A-201ENST00000228916 CCDC151A5D8V7 595 aa16.06■□□□□ 0.16
SCNN1A-201ENST00000228916 PDE4BQ07343 736 aa16.06■□□□□ 0.16
SCNN1A-201ENST00000228916 ZSCAN26Q16670 478 aa16.06■□□□□ 0.16
SCNN1A-201ENST00000228916 KRT28Q7Z3Y7 464 aa16.06■□□□□ 0.16
SCNN1A-201ENST00000228916 ELOA2Q8IYF1 753 aaPredicted RBP16.06■□□□□ 0.16
SCNN1A-201ENST00000228916 H7C1W4 665 aa16.06■□□□□ 0.16
SCNN1A-201ENST00000228916 MAP2K7O14733 419 aa16.06■□□□□ 0.16
SCNN1A-201ENST00000228916 FGAP02671 866 aa16.06■□□□□ 0.16
SCNN1A-201ENST00000228916 GNL2Q13823 731 aaKnown RBP16.06■□□□□ 0.16
SCNN1A-201ENST00000228916 RAB11FIP4Q86YS3 637 aa16.06■□□□□ 0.16
SCNN1A-201ENST00000228916 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.06■□□□□ 0.16
SCNN1A-201ENST00000228916 PCDHA5Q9Y5H7 936 aa16.06■□□□□ 0.16
SCNN1A-201ENST00000228916 CPDO75976 1380 aa16.06■□□□□ 0.16
SCNN1A-201ENST00000228916 ZNF18P17022 549 aa16.05■□□□□ 0.16
SCNN1A-201ENST00000228916 CDC27P30260 824 aa16.05■□□□□ 0.16
SCNN1A-201ENST00000228916 TXLNAP40222 546 aa16.05■□□□□ 0.16
SCNN1A-201ENST00000228916 LONRF3Q496Y0 759 aa16.05■□□□□ 0.16
SCNN1A-201ENST00000228916 PLBD2Q8NHP8 589 aa16.05■□□□□ 0.16
SCNN1A-201ENST00000228916 NCOA7Q8NI08 942 aa16.05■□□□□ 0.16
SCNN1A-201ENST00000228916 DHX58Q96C10 678 aa16.05■□□□□ 0.16
SCNN1A-201ENST00000228916 CYP27B1O15528 508 aa16.05■□□□□ 0.16
SCNN1A-201ENST00000228916 BRD3Q15059 726 aa16.05■□□□□ 0.16
SCNN1A-201ENST00000228916 LONRF2Q1L5Z9 754 aa16.05■□□□□ 0.16
SCNN1A-201ENST00000228916 CCDC102BQ68D86 513 aa16.05■□□□□ 0.16
SCNN1A-201ENST00000228916 SPECC1LQ69YQ0 1117 aa16.05■□□□□ 0.16
SCNN1A-201ENST00000228916 IFNL2Q8IZJ0 200 aa16.05■□□□□ 0.16
SCNN1A-201ENST00000228916 TATP17735 454 aaPredicted RBP16.05■□□□□ 0.16
SCNN1A-201ENST00000228916 LRRC24Q50LG9 513 aa16.05■□□□□ 0.16
SCNN1A-201ENST00000228916 AIFM3Q96NN9 605 aa16.05■□□□□ 0.16
SCNN1A-201ENST00000228916 A0A1B0GUL7 405 aa16.04■□□□□ 0.16
SCNN1A-201ENST00000228916 CUTAO60888 179 aa16.04■□□□□ 0.16
SCNN1A-201ENST00000228916 MDM2Q00987 491 aaPredicted RBP16.04■□□□□ 0.16
SCNN1A-201ENST00000228916 ZNF594Q96JF6 807 aaPredicted RBP16.04■□□□□ 0.16
SCNN1A-201ENST00000228916 AK7Q96M32 723 aa16.04■□□□□ 0.16
SCNN1A-201ENST00000228916 ALG1Q9BT22 464 aa16.04■□□□□ 0.16
SCNN1A-201ENST00000228916 ADAM21Q9UKJ8 722 aa16.04■□□□□ 0.16
SCNN1A-201ENST00000228916 GLI3P10071 1580 aa16.04■□□□□ 0.16
SCNN1A-201ENST00000228916 H3BQF6 201 aa16.04■□□□□ 0.16
SCNN1A-201ENST00000228916 KRT40Q6A162 431 aa16.04■□□□□ 0.16
SCNN1A-201ENST00000228916 CNNM3Q8NE01 707 aa16.04■□□□□ 0.16
SCNN1A-201ENST00000228916 GOLGA5Q8TBA6 731 aa16.04■□□□□ 0.16
SCNN1A-201ENST00000228916 CLIC6Q96NY7 704 aa16.04■□□□□ 0.16
SCNN1A-201ENST00000228916 KCNH3Q9ULD8 1083 aa16.04■□□□□ 0.16
SCNN1A-201ENST00000228916 ZMYM6O95789 1325 aa16.04■□□□□ 0.16
SCNN1A-201ENST00000228916 EYA2O00167 538 aa16.03■□□□□ 0.16
SCNN1A-201ENST00000228916 ZFYP08048 801 aaPredicted RBP16.03■□□□□ 0.16
SCNN1A-201ENST00000228916 TRIM34Q9BYJ4 488 aa16.03■□□□□ 0.16
SCNN1A-201ENST00000228916 ADKP55263 362 aaKnown RBP16.03■□□□□ 0.16
SCNN1A-201ENST00000228916 RALYLQ86SE5 291 aaKnown RBP16.03■□□□□ 0.16
SCNN1A-201ENST00000228916 PDILTQ8N807 584 aa16.03■□□□□ 0.16
SCNN1A-201ENST00000228916 IQUBQ8NA54 791 aa16.03■□□□□ 0.16
SCNN1A-201ENST00000228916 HNRNPLLQ8WVV9 542 aaKnown RBP16.03■□□□□ 0.16
SCNN1A-201ENST00000228916 MAP3K15Q6ZN16 1313 aa16.03■□□□□ 0.16
SCNN1A-201ENST00000228916 NBPF26B4DH59 902 aa16.03■□□□□ 0.16
SCNN1A-201ENST00000228916 NBPF14Q5TI25 921 aa16.03■□□□□ 0.16
SCNN1A-201ENST00000228916 NBPF10Q6P3W6 841 aaKnown RBP16.03■□□□□ 0.16
SCNN1A-201ENST00000228916 NBPF15Q8N660 670 aa16.03■□□□□ 0.16
SCNN1A-201ENST00000228916 DCAF5Q96JK2 942 aa16.03■□□□□ 0.16
SCNN1A-201ENST00000228916 KIF1AQ12756 1690 aa16.03■□□□□ 0.16
SCNN1A-201ENST00000228916 CIAO1O76071 339 aa16.02■□□□□ 0.16
SCNN1A-201ENST00000228916 MSL3Q8N5Y2 521 aaKnown RBP16.02■□□□□ 0.16
SCNN1A-201ENST00000228916 ENOX1Q8TC92 643 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms