RNA–Protein interactions for RNA: ENST00000196061.4

PLOD1-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLOD1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD1-201ENST00000196061 MECOMQ03112 1051 aa13.93□□□□□ -0.18
PLOD1-201ENST00000196061 MTMR6Q9Y217 621 aa13.93□□□□□ -0.18
PLOD1-201ENST00000196061 POLRMTO00411 1230 aaKnown RBP13.93□□□□□ -0.18
PLOD1-201ENST00000196061 ZNF445P59923 1031 aa13.93□□□□□ -0.18
PLOD1-201ENST00000196061 RALYLQ86SE5 291 aaKnown RBP13.93□□□□□ -0.18
PLOD1-201ENST00000196061 RNF214Q8ND24 703 aa13.93□□□□□ -0.18
PLOD1-201ENST00000196061 POLLQ9UGP5 575 aa13.93□□□□□ -0.18
PLOD1-201ENST00000196061 SAP30BPQ9UHR5 308 aaKnown RBP13.93□□□□□ -0.18
PLOD1-201ENST00000196061 MCM2P49736 904 aa13.92□□□□□ -0.18
PLOD1-201ENST00000196061 KLHL34Q8N239 644 aa13.92□□□□□ -0.18
PLOD1-201ENST00000196061 CWC22Q9HCG8 908 aaKnown RBP13.92□□□□□ -0.18
PLOD1-201ENST00000196061 TMEM63CQ9P1W3 806 aa13.92□□□□□ -0.18
PLOD1-201ENST00000196061 FBXO3Q9UK99 471 aa13.92□□□□□ -0.18
PLOD1-201ENST00000196061 PCDHAC2Q9Y5I4 1007 aa13.92□□□□□ -0.18
PLOD1-201ENST00000196061 GOLGA8BA8MQT2 603 aa13.92□□□□□ -0.18
PLOD1-201ENST00000196061 FAM47AQ5JRC9 791 aa13.92□□□□□ -0.18
PLOD1-201ENST00000196061 RASGRP2Q7LDG7 609 aa13.92□□□□□ -0.18
PLOD1-201ENST00000196061 TM6SF1Q9BZW5 370 aa13.92□□□□□ -0.18
PLOD1-201ENST00000196061 PPP1R1BQ9UD71 204 aaPredicted RBP13.92□□□□□ -0.18
PLOD1-201ENST00000196061 MYH7P12883 1935 aa13.92□□□□□ -0.18
PLOD1-201ENST00000196061 A0A087WWV3 80 aa13.91□□□□□ -0.18
PLOD1-201ENST00000196061 SYCE3A1L190 88 aa13.91□□□□□ -0.18
PLOD1-201ENST00000196061 ZNF500O60304 480 aaPredicted RBP13.91□□□□□ -0.18
PLOD1-201ENST00000196061 ZSCAN22P10073 491 aaPredicted RBP13.91□□□□□ -0.18
PLOD1-201ENST00000196061 NAA16Q6N069 864 aaPredicted RBP13.91□□□□□ -0.18
PLOD1-201ENST00000196061 PRDM4Q9UKN5 801 aa13.91□□□□□ -0.18
PLOD1-201ENST00000196061 SCAF8Q9UPN6 1271 aaKnown RBP13.91□□□□□ -0.18
PLOD1-201ENST00000196061 PTPDC1A2A3K4 754 aa13.91□□□□□ -0.18
PLOD1-201ENST00000196061 PDIA3P30101 505 aaKnown RBP13.91□□□□□ -0.18
PLOD1-201ENST00000196061 NOL7Q9UMY1 257 aaKnown RBP13.91□□□□□ -0.18
PLOD1-201ENST00000196061 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.91□□□□□ -0.18
PLOD1-201ENST00000196061 F13A1P00488 732 aa13.91□□□□□ -0.18
PLOD1-201ENST00000196061 EXOSC10Q01780 885 aaKnown RBP13.91□□□□□ -0.18
PLOD1-201ENST00000196061 SLC10A5Q5PT55 438 aa13.91□□□□□ -0.18
PLOD1-201ENST00000196061 NFXL1Q6ZNB6 911 aa13.91□□□□□ -0.18
PLOD1-201ENST00000196061 SLC44A5Q8NCS7 719 aa13.91□□□□□ -0.18
PLOD1-201ENST00000196061 NUP133Q8WUM0 1156 aa13.91□□□□□ -0.18
PLOD1-201ENST00000196061 GTF3C6Q969F1 213 aa13.91□□□□□ -0.18
PLOD1-201ENST00000196061 ZSWIM5Q9P217 1185 aa13.91□□□□□ -0.18
PLOD1-201ENST00000196061 RREB1Q92766 1687 aa13.9□□□□□ -0.18
PLOD1-201ENST00000196061 LY75O60449 1722 aa13.9□□□□□ -0.18
PLOD1-201ENST00000196061 USP17L8P0C7I0 530 aa13.9□□□□□ -0.18
PLOD1-201ENST00000196061 TTF1Q15361 905 aaPredicted RBP13.9□□□□□ -0.18
PLOD1-201ENST00000196061 DYNLL2Q96FJ2 89 aa13.9□□□□□ -0.18
PLOD1-201ENST00000196061 MAGEB6P1A0A0J9YX57 407 aa13.9□□□□□ -0.18
PLOD1-201ENST00000196061 POLR3DP05423 398 aaPredicted RBP13.9□□□□□ -0.18
PLOD1-201ENST00000196061 ST5P78524 1137 aa13.9□□□□□ -0.18
PLOD1-201ENST00000196061 GRAPQ13588 217 aa13.9□□□□□ -0.18
PLOD1-201ENST00000196061 GRAPLQ8TC17 118 aaPredicted RBP13.9□□□□□ -0.18
PLOD1-201ENST00000196061 UBR3Q6ZT12 1888 aa13.89□□□□□ -0.19
PLOD1-201ENST00000196061 SCN7AQ01118 1682 aa13.89□□□□□ -0.19
PLOD1-201ENST00000196061 CICQ96RK0 1608 aaPredicted RBP13.89□□□□□ -0.19
PLOD1-201ENST00000196061 SCNN1DP51172 638 aa13.89□□□□□ -0.19
PLOD1-201ENST00000196061 RBM10P98175 930 aaKnown RBP13.89□□□□□ -0.19
PLOD1-201ENST00000196061 MB21D2Q8IYB1 491 aaPredicted RBP13.89□□□□□ -0.19
PLOD1-201ENST00000196061 FAM184AQ8NB25 1140 aa13.89□□□□□ -0.19
PLOD1-201ENST00000196061 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.89□□□□□ -0.19
PLOD1-201ENST00000196061 ERCC4Q92889 916 aaPredicted RBP13.89□□□□□ -0.19
PLOD1-201ENST00000196061 PDLIM2Q96JY6 352 aa13.89□□□□□ -0.19
PLOD1-201ENST00000196061 DBNDD1Q9H9R9 158 aa13.89□□□□□ -0.19
PLOD1-201ENST00000196061 USP17L12C9JPN9 530 aa13.89□□□□□ -0.19
PLOD1-201ENST00000196061 USP17L21D6R901 530 aa13.89□□□□□ -0.19
PLOD1-201ENST00000196061 RANBP6O60518 1105 aaKnown RBP13.89□□□□□ -0.19
PLOD1-201ENST00000196061 ZFYP08048 801 aaPredicted RBP13.89□□□□□ -0.19
PLOD1-201ENST00000196061 CDC27P30260 824 aa13.89□□□□□ -0.19
PLOD1-201ENST00000196061 UBE4AQ14139 1066 aa13.89□□□□□ -0.19
PLOD1-201ENST00000196061 CAMK4Q16566 473 aa13.89□□□□□ -0.19
PLOD1-201ENST00000196061 INTS4Q96HW7 963 aaKnown RBP13.89□□□□□ -0.19
PLOD1-201ENST00000196061 PNPLA7Q6ZV29 1317 aa13.88□□□□□ -0.19
PLOD1-201ENST00000196061 H3BQV1 296 aa13.88□□□□□ -0.19
PLOD1-201ENST00000196061 UBE3CQ15386 1083 aa13.88□□□□□ -0.19
PLOD1-201ENST00000196061 IFFO2Q5TF58 517 aa13.88□□□□□ -0.19
PLOD1-201ENST00000196061 ZNF772Q68DY9 489 aaPredicted RBP13.88□□□□□ -0.19
PLOD1-201ENST00000196061 NSUN7Q8NE18 718 aaKnown RBP13.88□□□□□ -0.19
PLOD1-201ENST00000196061 NCOA7Q8NI08 942 aa13.88□□□□□ -0.19
PLOD1-201ENST00000196061 R3HCC1Q9Y3T6 440 aaKnown RBP13.88□□□□□ -0.19
PLOD1-201ENST00000196061 CACNB3P54284 484 aa13.88□□□□□ -0.19
PLOD1-201ENST00000196061 GTF2IP78347 998 aa13.88□□□□□ -0.19
PLOD1-201ENST00000196061 DZIP1Q86YF9 867 aaKnown RBP13.88□□□□□ -0.19
PLOD1-201ENST00000196061 KRT32Q14532 448 aa13.87□□□□□ -0.19
PLOD1-201ENST00000196061 FBXO33Q7Z6M2 555 aa13.87□□□□□ -0.19
PLOD1-201ENST00000196061 MTERF4Q7Z6M4 381 aaKnown RBP13.87□□□□□ -0.19
PLOD1-201ENST00000196061 MAPKAPK5Q8IW41 473 aa13.87□□□□□ -0.19
PLOD1-201ENST00000196061 NSUN4Q96CB9 384 aaKnown RBP13.87□□□□□ -0.19
PLOD1-201ENST00000196061 HPS5Q9UPZ3 1129 aa13.87□□□□□ -0.19
PLOD1-201ENST00000196061 WDR33Q9C0J8 1336 aaKnown RBP13.87□□□□□ -0.19
PLOD1-201ENST00000196061 PATL2C9JE40 543 aaKnown RBP13.87□□□□□ -0.19
PLOD1-201ENST00000196061 IFIT3O14879 490 aaKnown RBP13.87□□□□□ -0.19
PLOD1-201ENST00000196061 FDPSP14324 419 aaKnown RBP13.87□□□□□ -0.19
PLOD1-201ENST00000196061 TRDNQ13061 729 aa13.87□□□□□ -0.19
PLOD1-201ENST00000196061 SH3RF3Q8TEJ3 882 aaPredicted RBP13.87□□□□□ -0.19
PLOD1-201ENST00000196061 GNL3LQ9NVN8 582 aaKnown RBP13.87□□□□□ -0.19
PLOD1-201ENST00000196061 CACNA1SQ13698 1873 aa13.87□□□□□ -0.19
PLOD1-201ENST00000196061 PICALMQ13492 652 aa13.87□□□□□ -0.19
PLOD1-201ENST00000196061 TMEM67Q5HYA8 995 aa13.87□□□□□ -0.19
PLOD1-201ENST00000196061 FAM13BQ9NYF5 915 aa13.87□□□□□ -0.19
PLOD1-201ENST00000196061 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.87□□□□□ -0.19
PLOD1-201ENST00000196061 LRP5O75197 1615 aa13.87□□□□□ -0.19
PLOD1-201ENST00000196061 MYH2Q9UKX2 1941 aa13.86□□□□□ -0.19
PLOD1-201ENST00000196061 GUCY1A2P33402 732 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms