RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Ttc27Q8CD92 847 aa8.18□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Yeats4Q9CR11 227 aaKnown RBP8.18□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Dip2bQ3UH60 1574 aa8.18□□□□□ -1.1
Scn3a-201ENSMUST00000066432 RestQ8VIG1 1082 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Cfap73J3QPZ5 306 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Tekt3Q6X6Z7 490 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Foxp4Q9DBY0 795 aaKnown RBP8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Esr2O08537 530 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Kif2aP28740 705 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Uri1Q3TLD5 531 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Cnnm4Q69ZF7 771 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Slc44a1Q6X893 653 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Haus1Q8BHX1 278 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Ssr1Q9CY50 286 aaKnown RBP8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Irs4Q9Z0Y7 1216 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Fam81bA0A140LI28 432 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Krt13P08730 437 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Nf2P46662 596 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Mnat1P51949 309 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Ccdc114Q3UX62 658 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Cep128Q8BI22 1102 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Acsbg1Q99PU5 721 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Thrap3Q569Z6 951 aaKnown RBP8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Tsga10Q6NY15 697 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Smarca5Q91ZW3 1051 aaKnown RBP8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Cabp5Q9JLK3 173 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Plekhg2Q6KAU7 1340 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Hdgfl1Q2VPR5 283 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Sugp2Q8CH09 1067 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Tyro3P55144 880 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Map3k9Q3U1V8 1077 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Rhpn1Q61085 643 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Riox2Q8CD15 465 aa8.17□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Parp1P11103 1013 aaKnown RBP8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Sept2P42208 361 aaKnown RBP8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Bbof1Q3V079 533 aa8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 NfkbibQ60778 359 aa8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Ufl1Q8CCJ3 793 aaKnown RBP8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Hsf2bpQ9D4G2 338 aa8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Zfyve9A2A8R0 1397 aa8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Ube4aE9Q735 1028 aa8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Asic1Q6NXK8 526 aa8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Cd2bp2Q9CWK3 342 aaKnown RBP8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Hip1rQ9JKY5 1068 aa8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Nfxl1E9Q8I7 918 aaKnown RBP8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Mmp14P53690 582 aa8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Arid4aF8VPQ2 1261 aaKnown RBP8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Chl1P70232 1209 aa8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Lonp1Q8CGK3 949 aaKnown RBP8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Plcb3P51432 1234 aaKnown RBP8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Sik1Q60670 779 aa8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Dync1i1O88485 628 aa8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Cep135Q6P5D4 1140 aa8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Trim60Q8VI40 466 aa8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Cfap57Q9D180 1249 aa8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Sept3Q9Z1S5 350 aa8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Gpr161B2RPY5 545 aa8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Tpcn2Q8BWC0 731 aa8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Azi2Q9QYP6 405 aa8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Abcc4E9Q236 1325 aa8.16□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Kat6bQ8BRB7 1872 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Nlrp9aQ66X03 949 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Znf653Q6YND2 615 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 HmcesQ8R1M0 353 aaKnown RBP8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Osbpl5Q9ER64 874 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Ubap1lG3UW59 384 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 FosP01101 380 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Ddx31Q6NZQ2 687 aaKnown RBP8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 6820408C15RikQ8BJX2 354 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Unc13bQ9Z1N9 1602 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Ercc3P49135 783 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 ArsiQ32KI9 573 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Rasa3Q60790 834 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Sass6Q80UK7 654 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 WdpcpQ8C456 722 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Sipa1l1Q8C0T5 1782 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Terf1P70371 421 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Caprin2Q05A80 1031 aaKnown RBP8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 AlcamQ61490 583 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Rab34Q64008 259 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 GnptabQ69ZN6 1235 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Pdzd9Q9D9M4 266 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Ube3bQ9ES34 1070 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Col15a1O35206 1367 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Klhl30Q8C3F7 581 aa8.15□□□□□ -1.1
Scn3a-201ENSMUST00000066432 Igbp1Q61249 340 aa8.15□□□□□ -1.11
Scn3a-201ENSMUST00000066432 Nup58Q8R332 587 aa8.15□□□□□ -1.11
Scn3a-201ENSMUST00000066432 Letm1Q9Z2I0 738 aa8.15□□□□□ -1.11
Scn3a-201ENSMUST00000066432 Mst1rQ62190 1378 aa8.15□□□□□ -1.11
Scn3a-201ENSMUST00000066432 Klhl34A2AI76 644 aa8.15□□□□□ -1.11
Scn3a-201ENSMUST00000066432 FanclQ9CR14 375 aa8.15□□□□□ -1.11
Scn3a-201ENSMUST00000066432 Mmel1Q9JLI3 765 aa8.15□□□□□ -1.11
Scn3a-201ENSMUST00000066432 Gm5934D3Z4U6 212 aa8.15□□□□□ -1.11
Scn3a-201ENSMUST00000066432 Map2k1P31938 393 aa8.15□□□□□ -1.11
Scn3a-201ENSMUST00000066432 Eif4a1P60843 406 aaKnown RBP8.15□□□□□ -1.11
Scn3a-201ENSMUST00000066432 Atp2a1Q8R429 994 aa8.15□□□□□ -1.11
Scn3a-201ENSMUST00000066432 Col4a3bpQ9EQG9 624 aa8.15□□□□□ -1.11
Scn3a-201ENSMUST00000066432 Gm10110D3Z5M2 615 aa8.14□□□□□ -1.11
Scn3a-201ENSMUST00000066432 1700029H14RikE9PY36 240 aa8.14□□□□□ -1.11
Scn3a-201ENSMUST00000066432 Ctr9Q62018 1173 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms