RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Nlrp1aQ2LKU9 1182 aa18.63■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Lin9Q8C735 542 aa18.63■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Tut1Q8R3F9 869 aa18.63■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Arfgap2Q99K28 520 aa18.63■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Kdm5cP41230 1554 aa18.63■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Eef2P58252 858 aaKnown RBP18.63■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Gm5935Q497S0 212 aa18.63■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Ccdc25Q78PG9 208 aa18.63■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Opa1P58281 960 aa18.63■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Spa17Q62252 149 aa18.63■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Spata24Q6P926 205 aa18.63■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Mx2Q9WVP9 655 aa18.63■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Syde2E9PUP1 1314 aa18.63■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Psmd1Q3TXS7 953 aa18.62■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Mindy4Q3UQI9 744 aa18.62■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Anp32cQ64G17 123 aa18.62■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Pym1Q8CHP5 203 aaKnown RBP18.62■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Kdm6aO70546 1401 aa18.62■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Acbd3Q8BMP6 525 aa18.62■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Ftl2P49945 183 aa18.62■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Ccdc189Q6NZQ0 333 aa18.62■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Taok3Q8BYC6 898 aa18.62■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Irx4Q9QY61 515 aa18.62■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Disp3A3KFU9 1347 aa18.62■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Prl3d1P18121 224 aa18.61■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Cep128Q8BI22 1102 aa18.61■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Fmn2Q9JL04 1578 aa18.61■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Pdrg1P59048 133 aa18.61■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Lrrc36Q3V0M2 755 aa18.61■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Sgsm2Q80U12 1005 aa18.61■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Ifih1Q8R5F7 1025 aa18.61■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Capn12Q9ER56 720 aa18.61■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Abcc4E9Q236 1325 aa18.61■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Q8BZJ8 459 aa18.61■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Pak1O88643 545 aa18.61■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Atp6v1aP50516 617 aaKnown RBP18.61■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Jade3Q6IE82 823 aa18.61■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Atp1a4Q9WV27 1032 aa18.61■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Zbtb38Q3LR78 1197 aa18.6■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Bst2Q8R2Q8 172 aa18.6■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Stox1B2RQL2 990 aa18.6■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 1700029H14RikE9PY36 240 aa18.6■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Gm44503E9PYU5 387 aa18.6■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Oas2E9Q9A9 742 aa18.6■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Ankrd35E9Q9D8 996 aa18.6■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Zhx1P70121 873 aa18.6■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Mettl5Q8K1A0 209 aa18.6■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Ncapd2Q8K2Z4 1392 aa18.6■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 ByslO54825 436 aaKnown RBP18.6■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Smarcad1Q04692 1021 aa18.6■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Znf428Q8C1M2 176 aa18.6■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 NapgQ9CWZ7 312 aa18.6■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Eif6O55135 245 aa18.59■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Ptgs1P22437 602 aa18.59■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Cep63Q3UPP8 700 aa18.59■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Snd1Q78PY7 910 aaKnown RBP18.59■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Sdad1Q80UZ2 687 aaKnown RBP18.59■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 NppbP40753 121 aa18.59■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Wdr70Q3TWF6 657 aa18.59■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Sp4Q62445 782 aa18.59■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Atp2b4Q6Q477 1205 aa18.59■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Pnpla2Q8BJ56 486 aa18.59■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Fam204aQ8C6C7 236 aa18.59■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Kcnj14Q8JZN3 434 aa18.59■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Zfpm1O35615 995 aa18.59■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Cetn3O35648 167 aa18.59■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 VrtnQ3SYK4 740 aa18.59■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 TchpQ3TVW5 497 aa18.59■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Gpbp1Q6NXH3 473 aaKnown RBP18.59■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Adam1aQ60813 791 aa18.58■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Rassf2Q8BMS9 326 aa18.58■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Stoml1Q8CI66 399 aa18.58■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Gtf3c5Q8R2T8 520 aa18.58■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Armc3A2AU72 881 aa18.58■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Tubb2aQ7TMM9 445 aa18.58■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Tubb2bQ9CWF2 445 aa18.58■□□□□ 0.57
Ubfd1-201ENSMUST00000033158 Plbd2Q3TCN2 594 aa18.58■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 Nod2Q8K3Z0 1020 aa18.58■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 Ppfibp2O35711 882 aa18.58■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 Pank2Q3U4S0 443 aa18.58■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 Sept14Q9DA97 430 aa18.58■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 Azi2Q9QYP6 405 aa18.58■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 Samd15F6XZJ7 620 aa18.57■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 Caprin2Q05A80 1031 aaKnown RBP18.57■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 CoilQ5SU73 570 aa18.57■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 Haus6Q6NV99 933 aaKnown RBP18.57■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 Rexo1Q7TT28 1213 aa18.57■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 Foxp4Q9DBY0 795 aaKnown RBP18.57■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 Tfcp2Q9ERA0 502 aa18.57■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 U2af2P26369 475 aaKnown RBP18.57■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 Specc1lQ2KN98 1118 aaKnown RBP18.57■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 Map3k12Q60700 888 aa18.57■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 Bend3Q6PAL0 825 aa18.57■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 Ccnt1Q9QWV9 724 aaKnown RBP18.57■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 Six6os1Q9CTN5 574 aa18.57■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 Sos2Q02384 1333 aa18.57■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 Ccdc157Q5SPX1 718 aa18.57■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 Lztfl1Q9JHQ5 299 aa18.57■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 Krt13P08730 437 aa18.56■□□□□ 0.56
Ubfd1-201ENSMUST00000033158 SlmapQ3URD3 845 aa18.56■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 106.3 ms