RNA–Protein interactions for RNA: ENST00000641746.1

CASC19-256, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 958 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-256	ENST00000641746	HIST1H2BJ	P06899	126 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	OR5AL1	P0C617	328 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	PATE4	P0C8F1	98 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	HIST1H2BO	P23527	126 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	HIST1H2BB	P33778	126 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	MPV17	P39210	176 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	SUB1	P53999	127 aa	Known RBP eCLIP	3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	OR12D2	P58182	307 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	HIST1H2BD	P58876	126 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	RHOB	P62745	196 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	HIST1H2BC	P62807	126 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	HIST1H3A	P68431	136 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	SRSF9	Q13242	221 aa	Known RBP eCLIP	3.88	□□□□□ -1.79	1e-6	■□□□□ 9.5
CASC19-256	ENST00000641746	ZNF726P1	Q15940	193 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	HIST2H2BE	Q16778	126 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	CLEC12A	Q5QGZ9	265 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	FAM201A	Q5SY85	155 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	LCN8	Q6JVE9	175 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	TBPL2	Q6SJ96	375 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	TMEM219	Q86XT9	240 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	ZNF584	Q8IVC4	421 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	ODF3L1	Q8IXM7	274 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	FAM24B	Q8N5W8	94 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	ZNF645	Q8N7E2	425 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	NEXN-AS1	Q8NBZ9	246 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	OR5D16	Q8NGK9	328 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	VN1R17P	Q8TDU5	208 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	HIST1H2BH	Q93079	126 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	TMEM106A	Q96A25	262 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	PPCDC	Q96CD2	204 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	DDIT4L	Q96D03	193 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	MGLL	Q99685	303 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	HIST1H2BN	Q99877	126 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	HIST1H2BM	Q99879	126 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	TAPBPL	Q9BX59	468 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	EBPL	Q9BY08	206 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	MAP1LC3B	Q9GZQ8	125 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	EXOSC4	Q9NPD3	245 aa	Known RBP	3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	EXOSC3	Q9NQT5	275 aa	Known RBP	3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	FKBP11	Q9NYL4	201 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	TAS2R8	Q9NYW2	309 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	THYN1	Q9P016	225 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	MARCO	Q9UEW3	520 aa	Predicted RBP	3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	PKD1	P98161	4303 aa		3.88	□□□□□ -1.79
CASC19-256	ENST00000641746	BORCS7-ASMT	A0A0B4J1R7	106 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	FAM240A	A0A1B0GVK7	77 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	C7orf77	A4D0Y5	90 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	TMEM189	A5PLL7	270 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	C15orf61	A6NNL5	157 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	NCBP2L	A6PVI3	153 aa	Known RBP	3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	ZNF705F	A8MVS1	300 aa	Predicted RBP	3.87	□□□□□ -1.79
CASC19-256	ENST00000641746		H3BSH0	61 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	DBI	P07108	87 aa	Known RBP	3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	SFTA3	P0C7M3	94 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	ZNF705D	P0CH99	300 aa	Predicted RBP	3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	ZNF705B	P0CI00	300 aa	Predicted RBP	3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	PSG2	P11465	335 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	RPL35A	P18077	110 aa	Known RBP	3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	PRKACG	P22612	351 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	TGFBR1	P36897	503 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	REG1B	P48304	166 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	HNRNPA3	P51991	378 aa	Known RBP	3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	BRWD1-AS2	P59051	145 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	SRPX	P78539	464 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	RPL18A	Q02543	176 aa	Known RBP	3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	HSD52	Q0P140	79 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	TMEM267	Q0VDI3	215 aa	Predicted RBP	3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	DHRS2	Q13268	280 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	ZNF266	Q14584	549 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	ZNF718	Q3SXZ3	478 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	GLT8D1	Q68CQ7	371 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	SFXN4	Q6P4A7	337 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	ARL9	Q6T311	187 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	SLC25A26	Q70HW3	274 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	C20orf196	Q8IYI0	205 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	ZNF440	Q8IYI8	595 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	C5orf17	Q8NAS9	161 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	KLHL30-AS1	Q8NEE0	82 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	OR5AP2	Q8NGF4	316 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	OR4X1	Q8NH49	305 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	PTX4	Q96A99	478 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	PGLYRP3	Q96LB9	341 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	DNAJC30	Q96LL9	226 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	RARRES2	Q99969	163 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	GINS3	Q9BRX5	216 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	DERL1	Q9BUN8	251 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	SMIM3	Q9BZL3	60 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	GTSF1L	Q9H1H1	148 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	RNF167	Q9H6Y7	350 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	IL36RN	Q9UBH0	155 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	UQCR10	Q9UDW1	63 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	LAMTOR2	Q9Y2Q5	125 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	LSM5	Q9Y4Y9	91 aa	Known RBP	3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	RFNG	Q9Y644	331 aa		3.87	□□□□□ -1.79
CASC19-256	ENST00000641746	LOC100130705	A0A1B0GUX0	176 aa		3.86	□□□□□ -1.79
CASC19-256	ENST00000641746	GGT3P	A6NGU5	568 aa		3.86	□□□□□ -1.79
CASC19-256	ENST00000641746		K7EPK0	472 aa		3.86	□□□□□ -1.79
CASC19-256	ENST00000641746	BCL2L11	O43521	198 aa		3.86	□□□□□ -1.79
CASC19-256	ENST00000641746	UBL3	O95164	117 aa		3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms