RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 DOK5Q9P104 306 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 TGP01266 2768 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 APOC3P02656 99 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 RD3LP0DJH9 198 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 ORM2P19652 201 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 PPIFP30405 207 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 FCGR2BP31994 310 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 PLP1P60201 277 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 OR1B1Q8NGR6 318 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 RXFP4Q8TDU9 374 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 WFDC12Q8WWY7 111 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 NOL4LQ96MY1 436 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 MS4A10Q96PG2 267 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 SLC35B3Q9H1N7 401 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 VAX2Q9UIW0 290 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 FAM181BA6NEQ2 426 aa7.37□□□□□ -1.23
PDLIM5-223ENST00000627587 H3BUA1 57 aa7.37□□□□□ -1.23
PDLIM5-223ENST00000627587 HYPMO75409 117 aa7.37□□□□□ -1.23
PDLIM5-223ENST00000627587 TOMM40O96008 361 aa7.37□□□□□ -1.23
PDLIM5-223ENST00000627587 IGHV3-23P01764 117 aa7.37□□□□□ -1.23
PDLIM5-223ENST00000627587 C8orf88P0DMB2 117 aa7.37□□□□□ -1.23
PDLIM5-223ENST00000627587 YPEL3P61236 119 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-223ENST00000627587 LYZP61626 148 aa7.37□□□□□ -1.23
PDLIM5-223ENST00000627587 PQLC2Q6ZP29 291 aa7.37□□□□□ -1.23
PDLIM5-223ENST00000627587 LINC00305Q7Z4B0 112 aa7.37□□□□□ -1.23
PDLIM5-223ENST00000627587 OR51G1Q8NGK1 321 aa7.37□□□□□ -1.23
PDLIM5-223ENST00000627587 SVIPQ8NHG7 77 aa7.37□□□□□ -1.23
PDLIM5-223ENST00000627587 EEF1AKMT3Q96AZ1 226 aa7.37□□□□□ -1.23
PDLIM5-223ENST00000627587 CITED1Q99966 193 aa7.37□□□□□ -1.23
PDLIM5-223ENST00000627587 GAR1Q9NY12 217 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-223ENST00000627587 ZNF580Q9UK33 172 aa7.37□□□□□ -1.23
PDLIM5-223ENST00000627587 TMA7Q9Y2S6 64 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-223ENST00000627587 TRBV7-1A0A0A6YYK4 115 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 OR2T8A6NH00 312 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 FAM223BA6NKX1 122 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 NUPL2O15504 423 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 OR7C2O60412 319 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 TRGV3P03979 118 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 GCHFRP30047 84 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 CFHR3Q02985 330 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 TMEM95Q3KNT9 176 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 FAM223AQ8IWN6 122 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 CCDC28AQ8IWP9 274 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 ARL6IP6Q8N6S5 226 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 ZNF502Q8TBZ5 544 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 FAM167A-AS1Q96KT0 104 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 CCDC140Q96MF4 163 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 UHRF2Q96PU4 802 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 PRSS22Q9GZN4 317 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 NPFFR1Q9GZQ6 430 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 TMEM167BQ9NRX6 74 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 CARHSP1Q9Y2V2 147 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 PAGE4O60829 102 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 BRI3O95415 125 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 SRP19P09132 144 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 ADMP35318 185 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 MEF2BQ02080 365 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 ATP5G2Q06055 141 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 GUCA2BQ16661 112 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 OR5AU1Q8NGC0 362 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 Q8WTZ3 238 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 HIGD1AQ9Y241 93 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 TRRAPQ9Y4A5 3859 aa7.36□□□□□ -1.23
PDLIM5-223ENST00000627587 TRAV5A0A0B4J249 113 aa7.35□□□□□ -1.23
PDLIM5-223ENST00000627587 IL4P05112 153 aa7.35□□□□□ -1.23
PDLIM5-223ENST00000627587 CTSGP08311 255 aa7.35□□□□□ -1.23
PDLIM5-223ENST00000627587 GPR183P32249 361 aa7.35□□□□□ -1.23
PDLIM5-223ENST00000627587 CEBPGP53567 150 aa7.35□□□□□ -1.23
PDLIM5-223ENST00000627587 TPPP2P59282 170 aa7.35□□□□□ -1.23
PDLIM5-223ENST00000627587 CD81P60033 236 aa7.35□□□□□ -1.23
PDLIM5-223ENST00000627587 UBE2G2P60604 165 aa7.35□□□□□ -1.23
PDLIM5-223ENST00000627587 SOHLH1Q5JUK2 328 aa7.35□□□□□ -1.23
PDLIM5-223ENST00000627587 ATRAIDQ6UW56 229 aa7.35□□□□□ -1.23
PDLIM5-223ENST00000627587 S100A7AQ86SG5 101 aa7.35□□□□□ -1.23
PDLIM5-223ENST00000627587 SVBPQ8N300 66 aa7.35□□□□□ -1.23
PDLIM5-223ENST00000627587 RNF125Q96EQ8 232 aa7.35□□□□□ -1.23
PDLIM5-223ENST00000627587 ATP6V0BQ99437 205 aa7.35□□□□□ -1.23
PDLIM5-223ENST00000627587 TXNDC17Q9BRA2 123 aa7.35□□□□□ -1.23
PDLIM5-223ENST00000627587 CHRDL1Q9BU40 450 aa7.35□□□□□ -1.23
PDLIM5-223ENST00000627587 SLC25A2Q9BXI2 301 aa7.35□□□□□ -1.23
PDLIM5-223ENST00000627587 RNF114Q9Y508 228 aa7.35□□□□□ -1.23
PDLIM5-223ENST00000627587 CMYA5Q8N3K9 4069 aa7.35□□□□□ -1.23
PDLIM5-223ENST00000627587 VWFP04275 2813 aa7.34□□□□□ -1.23
PDLIM5-223ENST00000627587 C11orf94C9JXX5 98 aa7.34□□□□□ -1.23
PDLIM5-223ENST00000627587 NDUFS6O75380 124 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-223ENST00000627587 SCO1O75880 301 aa7.34□□□□□ -1.23
PDLIM5-223ENST00000627587 OR2C1O95371 312 aa7.34□□□□□ -1.23
PDLIM5-223ENST00000627587 IGLV1-40P01703 118 aa7.34□□□□□ -1.23
PDLIM5-223ENST00000627587 CLEC3BP05452 202 aa7.34□□□□□ -1.23
PDLIM5-223ENST00000627587 PF4V1P10720 104 aa7.34□□□□□ -1.23
PDLIM5-223ENST00000627587 CST9LP1Q5W188 147 aa7.34□□□□□ -1.23
PDLIM5-223ENST00000627587 ZNF491Q8N8L2 437 aa7.34□□□□□ -1.23
PDLIM5-223ENST00000627587 CYB561D1Q8N8Q1 229 aa7.34□□□□□ -1.23
PDLIM5-223ENST00000627587 STXBP6Q8NFX7 210 aa7.34□□□□□ -1.23
PDLIM5-223ENST00000627587 USMG5Q96IX5 58 aa7.34□□□□□ -1.23
PDLIM5-223ENST00000627587 KLK15Q9H2R5 256 aa7.34□□□□□ -1.23
PDLIM5-223ENST00000627587 WI2-2373I1.2A0A1W2PRP0 233 aa7.34□□□□□ -1.23
PDLIM5-223ENST00000627587 OR10J4P0C629 311 aa7.34□□□□□ -1.23
PDLIM5-223ENST00000627587 BTF3P20290 206 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-223ENST00000627587 UBE2L3P68036 154 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms