RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 LY6HO94772 140 aa16.54■□□□□ 0.24
FGFR1-241ENST00000619564 LYPD2Q6UXB3 125 aa16.54■□□□□ 0.24
FGFR1-241ENST00000619564 TRAV3A0A0B4J244 114 aa16.54■□□□□ 0.24
FGFR1-241ENST00000619564 E7EQL1 145 aa16.54■□□□□ 0.24
FGFR1-241ENST00000619564 PLNP26678 52 aa16.54■□□□□ 0.24
FGFR1-241ENST00000619564 Q6P435 159 aa16.54■□□□□ 0.24
FGFR1-241ENST00000619564 SAA4P35542 130 aa16.53■□□□□ 0.24
FGFR1-241ENST00000619564 GATA3P23771 443 aa16.53■□□□□ 0.24
FGFR1-241ENST00000619564 LINC00477Q96M19 166 aa16.53■□□□□ 0.24
FGFR1-241ENST00000619564 RNF223E7ERA6 249 aa16.53■□□□□ 0.24
FGFR1-241ENST00000619564 FCN3O75636 299 aa16.52■□□□□ 0.24
FGFR1-241ENST00000619564 PRB4P10163 310 aaPredicted RBP16.52■□□□□ 0.24
FGFR1-241ENST00000619564 SPATA31B1PQ5VZV4 182 aa16.52■□□□□ 0.24
FGFR1-241ENST00000619564 PRTN3P24158 256 aa16.52■□□□□ 0.24
FGFR1-241ENST00000619564 CKS1BP61024 79 aa16.52■□□□□ 0.24
FGFR1-241ENST00000619564 TRAV12-3A0A0B4J271 114 aa16.52■□□□□ 0.23
FGFR1-241ENST00000619564 INSP01308 110 aa16.52■□□□□ 0.23
FGFR1-241ENST00000619564 IGKV1-5P01602 117 aa16.52■□□□□ 0.23
FGFR1-241ENST00000619564 ASCL4Q6XD76 172 aa16.52■□□□□ 0.23
FGFR1-241ENST00000619564 CHCHD1Q96BP2 118 aaKnown RBP16.52■□□□□ 0.23
FGFR1-241ENST00000619564 MGST2Q99735 147 aa16.52■□□□□ 0.23
FGFR1-241ENST00000619564 LOC105371267A0A1B0GV96 52 aa16.51■□□□□ 0.23
FGFR1-241ENST00000619564 MSMBP08118 114 aa16.51■□□□□ 0.23
FGFR1-241ENST00000619564 TRAV2A0A0B4J234 112 aa16.51■□□□□ 0.23
FGFR1-241ENST00000619564 C5orf63A6NC05 138 aa16.51■□□□□ 0.23
FGFR1-241ENST00000619564 TYMSP04818 313 aa16.51■□□□□ 0.23
FGFR1-241ENST00000619564 C1QL4Q86Z23 238 aa16.51■□□□□ 0.23
FGFR1-241ENST00000619564 SPCS1Q9Y6A9 102 aa16.51■□□□□ 0.23
FGFR1-241ENST00000619564 IGHV3-73A0A0B4J1V6 119 aa16.51■□□□□ 0.23
FGFR1-241ENST00000619564 CA1P00915 261 aaPredicted RBP16.51■□□□□ 0.23
FGFR1-241ENST00000619564 IGKCP01834 107 aa16.51■□□□□ 0.23
FGFR1-241ENST00000619564 PAX2Q02962 417 aa16.51■□□□□ 0.23
FGFR1-241ENST00000619564 MORN3Q6PF18 240 aaPredicted RBP16.51■□□□□ 0.23
FGFR1-241ENST00000619564 DICER1Q9UPY3 1922 aaKnown RBP16.51■□□□□ 0.23
FGFR1-241ENST00000619564 TCRAP04437 139 aa16.5■□□□□ 0.23
FGFR1-241ENST00000619564 LINC00158P58513 81 aa16.5■□□□□ 0.23
FGFR1-241ENST00000619564 ZNF876PQ49A33 203 aa16.5■□□□□ 0.23
FGFR1-241ENST00000619564 Q5PR19 223 aa16.5■□□□□ 0.23
FGFR1-241ENST00000619564 LAGE3Q14657 143 aa16.5■□□□□ 0.23
FGFR1-241ENST00000619564 PRR30Q53SZ7 412 aaPredicted RBP16.5■□□□□ 0.23
FGFR1-241ENST00000619564 FXYD7P58549 80 aa16.5■□□□□ 0.23
FGFR1-241ENST00000619564 NMSQ5H8A3 153 aa16.5■□□□□ 0.23
FGFR1-241ENST00000619564 RHPN1-AS1Q9BWJ2 59 aa16.5■□□□□ 0.23
FGFR1-241ENST00000619564 ARHGEF17Q96PE2 2063 aaPredicted RBP16.5■□□□□ 0.23
FGFR1-241ENST00000619564 A0A1B0GV90 55 aa16.49■□□□□ 0.23
FGFR1-241ENST00000619564 LINC00473A8K010 186 aa16.49■□□□□ 0.23
FGFR1-241ENST00000619564 FGF16O43320 207 aa16.49■□□□□ 0.23
FGFR1-241ENST00000619564 GZMBP10144 247 aa16.49■□□□□ 0.23
FGFR1-241ENST00000619564 S100A7L2Q5SY68 101 aa16.49■□□□□ 0.23
FGFR1-241ENST00000619564 KIF26BQ2KJY2 2108 aa16.49■□□□□ 0.23
FGFR1-241ENST00000619564 SRSF3P84103 164 aaKnown RBP16.49■□□□□ 0.23
FGFR1-241ENST00000619564 FOXL2NBQ6ZUU3 175 aa16.49■□□□□ 0.23
FGFR1-241ENST00000619564 IFI27L1Q96BM0 104 aa16.49■□□□□ 0.23
FGFR1-241ENST00000619564 TDGF1P3P51864 188 aa16.49■□□□□ 0.23
FGFR1-241ENST00000619564 NIT1Q86X76 327 aa16.49■□□□□ 0.23
FGFR1-241ENST00000619564 PSCAO43653 123 aa16.48■□□□□ 0.23
FGFR1-241ENST00000619564 TOMM40O96008 361 aa16.48■□□□□ 0.23
FGFR1-241ENST00000619564 IGHV3-53P01767 116 aa16.48■□□□□ 0.23
FGFR1-241ENST00000619564 TMEM14EPQ6UXP3 125 aa16.48■□□□□ 0.23
FGFR1-241ENST00000619564 SUPT4H1P63272 117 aaKnown RBP16.48■□□□□ 0.23
FGFR1-241ENST00000619564 ACACAQ13085 2346 aa16.48■□□□□ 0.23
FGFR1-241ENST00000619564 C5orf30Q96GV9 206 aa16.48■□□□□ 0.23
FGFR1-241ENST00000619564 LCN12Q6JVE5 192 aa16.48■□□□□ 0.23
FGFR1-241ENST00000619564 PHLDA1Q8WV24 401 aaPredicted RBP16.48■□□□□ 0.23
FGFR1-241ENST00000619564 DAZ1Q9NQZ3 744 aaKnown RBP16.48■□□□□ 0.23
FGFR1-241ENST00000619564 CACNA1DQ01668 2161 aa16.47■□□□□ 0.23
FGFR1-241ENST00000619564 A0A0U1RRA0 63 aa16.47■□□□□ 0.23
FGFR1-241ENST00000619564 OR5A1Q8NGJ0 315 aa16.47■□□□□ 0.23
FGFR1-241ENST00000619564 UBE2E2Q96LR5 201 aa16.47■□□□□ 0.23
FGFR1-241ENST00000619564 SRSF8Q9BRL6 282 aaKnown RBP16.47■□□□□ 0.23
FGFR1-241ENST00000619564 RIPPLY3P57055 190 aa16.47■□□□□ 0.23
FGFR1-241ENST00000619564 AGMATQ9BSE5 352 aa16.47■□□□□ 0.23
FGFR1-241ENST00000619564 SLC25A2Q9BXI2 301 aa16.47■□□□□ 0.23
FGFR1-241ENST00000619564 NHP2Q9NX24 153 aaKnown RBP16.47■□□□□ 0.23
FGFR1-241ENST00000619564 A6NNC1 897 aa16.46■□□□□ 0.23
FGFR1-241ENST00000619564 IGHV4-39P01824 125 aa16.46■□□□□ 0.23
FGFR1-241ENST00000619564 HGFACQ04756 655 aa16.46■□□□□ 0.23
FGFR1-241ENST00000619564 CD300EQ496F6 205 aaPredicted RBP16.46■□□□□ 0.23
FGFR1-241ENST00000619564 IGHV3-64A0A075B6Q5 118 aa16.46■□□□□ 0.23
FGFR1-241ENST00000619564 LINC01559Q495D7 138 aa16.46■□□□□ 0.23
FGFR1-241ENST00000619564 LYZL1Q6UWQ5 148 aa16.46■□□□□ 0.23
FGFR1-241ENST00000619564 SMPXQ9UHP9 88 aa16.46■□□□□ 0.23
FGFR1-241ENST00000619564 LYPD1Q8N2G4 141 aa16.46■□□□□ 0.23
FGFR1-241ENST00000619564 MTURNQ8N3F0 131 aa16.46■□□□□ 0.23
FGFR1-241ENST00000619564 C11orf68Q9H3H3 251 aaKnown RBP16.46■□□□□ 0.23
FGFR1-241ENST00000619564 UBE2E1P51965 193 aa16.46■□□□□ 0.22
FGFR1-241ENST00000619564 FOXL1Q12952 345 aa16.46■□□□□ 0.22
FGFR1-241ENST00000619564 TMEM95Q3KNT9 176 aa16.45■□□□□ 0.22
FGFR1-241ENST00000619564 ATRAIDQ6UW56 229 aa16.45■□□□□ 0.22
FGFR1-241ENST00000619564 RFNGQ9Y644 331 aa16.45■□□□□ 0.22
FGFR1-241ENST00000619564 TRAV9-2A0A087WT02 112 aa16.45■□□□□ 0.22
FGFR1-241ENST00000619564 OVOL3O00110 214 aa16.45■□□□□ 0.22
FGFR1-241ENST00000619564 SH2D1AO60880 128 aa16.45■□□□□ 0.22
FGFR1-241ENST00000619564 SYNJ2BPP57105 145 aa16.45■□□□□ 0.22
FGFR1-241ENST00000619564 SBF1O95248 1867 aa16.45■□□□□ 0.22
FGFR1-241ENST00000619564 PSG3Q16557 428 aa16.45■□□□□ 0.22
FGFR1-241ENST00000619564 RUSC1-AS1Q66K80 236 aa16.45■□□□□ 0.22
FGFR1-241ENST00000619564 CST9LQ9H4G1 147 aa16.45■□□□□ 0.22
FGFR1-241ENST00000619564 NCR2O95944 276 aa16.45■□□□□ 0.22
FGFR1-241ENST00000619564 TRAV1-1A0A0B4J248 108 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms